| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451869
Identifier: 126451869
GI number: 126451869
Start: 3882618
End: 3883697
Strand: Reverse
Name: 126451869
Synonym: BURPS1106A_3982
Alternate gene names: NA
Gene position: 3883697-3882618 (Counterclockwise)
Preceding gene: 126455444
Following gene: 126454469
Centisome position: 97.37
GC content: 60.28
Gene sequence:
>1080_bases ATGATGAACGACGACGAGATTCAAGCGTGGGTTGCCGACCCCAAGCGCGCCGGTACGTTACCCTTTGCGGCGTTCGAGCC GCGCTATCCACATAAAGGCGTGGGCGCCGCGCTGGCGGTGCGCGGAGTGCTGTATTTCAAGGGGGGGTACTCGAGAGACG TTCGCCGCGAAATTTCAGCGTGTTTCGACCAGTACAAAGAGGTGGCAAGCGGCGCTTTGCGCTGGTTTTTTCTGGAGGGG AAACGCGCGGTATCGATCGCCAAGGCTCCCTCGTTGGCAACGCTGGCAGCGAGCCTGAGCGAAGATCAGCCGTTCACGTT CGCGTTCACCAGTGGAGACAGCACGCGCGAAGCGAGCATGTACGGATTCGACGCGTTCTGTCTCGAGAAGTGGCAAGCGG CGCTGGGGACGCGAGGGCTCGACGTGCTGTCTTTCTCGTTGCCCGTACCTGTCGTCAAGGCCGATCCTGATCTTCTGCCG AGGTTGTTTGCGGAATTCGCGCGGCGTCTCAACGCGATTCATGGACACGCCGGCTACGCGGTGAATTTGCCGCCTACGGC GCGCGAAGAGAACGAGAGCAGCGAATATTTCATGTCGAATCGACTCGGACCGGGCCTCGACGTGGGCGATCCTTTTGCAA CCGAGGTCCGAAGCCTGATGGACAACATCAAGACCGTTGACTGGCTGACGCTGATCAGCGCTTCGATGGTCGACCGTGTT GGCGGTGTGAGCGTGCTGAAATCCGAGTTGCCGATGGATTGGTATCGGCTGACGCAGTGCTCGGAGGGCTTGCTCATCCG AGCCGGCGTTTTGCCTGCCGCGGGCGTGAATGCGGGGAGTGGCGACAAGCCAGTTGGTCCGCCACCCGCGTATGTCGTAT TGAATGCGGCGCTTCGCCACCTTATCCCCGATACCGTCTCCATTCTTCAACGTGGAACCGTGAACGGCGACGCTCCGGTT TTCAACTCGAAGACGAGCAGCAACGCGTGGCTTCGGCGTCTCGATGTTTCCAGCGATGAACTGTTGGCCGCGAAAGCGGC GGTCCTCGATACGCCGAGACTCTCTGATTCTTCGTCGTAA
Upstream 100 bases:
>100_bases CAGTCTCGACATCTGGCGAGTCTTCCTTTGGGGCGGGCCTCGACGCGTATCTGCACAGCCCTCCGCCACCTCCGGCGCCT CCTCCTGTATTTGTGCCTTG
Downstream 100 bases:
>100_bases CCCGCGCGAGCCCTGCGTGGCATGCATTTACTTGATCCACTGCGGGTTACGTTGAATCGCGCTACATCACGGTCGGCACG CTGGACGGCCGCATGATCGT
Product: gp30
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MMNDDEIQAWVADPKRAGTLPFAAFEPRYPHKGVGAALAVRGVLYFKGGYSRDVRREISACFDQYKEVASGALRWFFLEG KRAVSIAKAPSLATLAASLSEDQPFTFAFTSGDSTREASMYGFDAFCLEKWQAALGTRGLDVLSFSLPVPVVKADPDLLP RLFAEFARRLNAIHGHAGYAVNLPPTAREENESSEYFMSNRLGPGLDVGDPFATEVRSLMDNIKTVDWLTLISASMVDRV GGVSVLKSELPMDWYRLTQCSEGLLIRAGVLPAAGVNAGSGDKPVGPPPAYVVLNAALRHLIPDTVSILQRGTVNGDAPV FNSKTSSNAWLRRLDVSSDELLAAKAAVLDTPRLSDSSS
Sequences:
>Translated_359_residues MMNDDEIQAWVADPKRAGTLPFAAFEPRYPHKGVGAALAVRGVLYFKGGYSRDVRREISACFDQYKEVASGALRWFFLEG KRAVSIAKAPSLATLAASLSEDQPFTFAFTSGDSTREASMYGFDAFCLEKWQAALGTRGLDVLSFSLPVPVVKADPDLLP RLFAEFARRLNAIHGHAGYAVNLPPTAREENESSEYFMSNRLGPGLDVGDPFATEVRSLMDNIKTVDWLTLISASMVDRV GGVSVLKSELPMDWYRLTQCSEGLLIRAGVLPAAGVNAGSGDKPVGPPPAYVVLNAALRHLIPDTVSILQRGTVNGDAPV FNSKTSSNAWLRRLDVSSDELLAAKAAVLDTPRLSDSSS >Mature_359_residues MMNDDEIQAWVADPKRAGTLPFAAFEPRYPHKGVGAALAVRGVLYFKGGYSRDVRREISACFDQYKEVASGALRWFFLEG KRAVSIAKAPSLATLAASLSEDQPFTFAFTSGDSTREASMYGFDAFCLEKWQAALGTRGLDVLSFSLPVPVVKADPDLLP RLFAEFARRLNAIHGHAGYAVNLPPTAREENESSEYFMSNRLGPGLDVGDPFATEVRSLMDNIKTVDWLTLISASMVDRV GGVSVLKSELPMDWYRLTQCSEGLLIRAGVLPAAGVNAGSGDKPVGPPPAYVVLNAALRHLIPDTVSILQRGTVNGDAPV FNSKTSSNAWLRRLDVSSDELLAAKAAVLDTPRLSDSSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38789; Mature: 38789
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNDDEIQAWVADPKRAGTLPFAAFEPRYPHKGVGAALAVRGVLYFKGGYSRDVRREISA CCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHH CFDQYKEVASGALRWFFLEGKRAVSIAKAPSLATLAASLSEDQPFTFAFTSGDSTREASM HHHHHHHHHHHHEEEEEECCCCEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHH YGFDAFCLEKWQAALGTRGLDVLSFSLPVPVVKADPDLLPRLFAEFARRLNAIHGHAGYA CCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEE VNLPPTAREENESSEYFMSNRLGPGLDVGDPFATEVRSLMDNIKTVDWLTLISASMVDRV EECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVSVLKSELPMDWYRLTQCSEGLLIRAGVLPAAGVNAGSGDKPVGPPPAYVVLNAALRH CCHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LIPDTVSILQRGTVNGDAPVFNSKTSSNAWLRRLDVSSDELLAAKAAVLDTPRLSDSSS HCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMNDDEIQAWVADPKRAGTLPFAAFEPRYPHKGVGAALAVRGVLYFKGGYSRDVRREISA CCCCHHHHEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHH CFDQYKEVASGALRWFFLEGKRAVSIAKAPSLATLAASLSEDQPFTFAFTSGDSTREASM HHHHHHHHHHHHEEEEEECCCCEEEECCCCCHHHHHHHCCCCCCEEEEEECCCCCCCHHH YGFDAFCLEKWQAALGTRGLDVLSFSLPVPVVKADPDLLPRLFAEFARRLNAIHGHAGYA CCHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEE VNLPPTAREENESSEYFMSNRLGPGLDVGDPFATEVRSLMDNIKTVDWLTLISASMVDRV EECCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGVSVLKSELPMDWYRLTQCSEGLLIRAGVLPAAGVNAGSGDKPVGPPPAYVVLNAALRH CCHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LIPDTVSILQRGTVNGDAPVFNSKTSSNAWLRRLDVSSDELLAAKAAVLDTPRLSDSSS HCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA