| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is marR [C]
Identifier: 126451868
GI number: 126451868
Start: 1730506
End: 1731003
Strand: Reverse
Name: marR [C]
Synonym: BURPS1106A_1769
Alternate gene names: 126451868
Gene position: 1731003-1730506 (Counterclockwise)
Preceding gene: 126454404
Following gene: 126452748
Centisome position: 43.4
GC content: 66.27
Gene sequence:
>498_bases ATGTCGGATCCCTCTTCCCCGCAGCCCGACCAGGACCTGGCCCTGTATCAGATCAACGACAGCGTCGGCTACCTGATGTC GCGCGTGAAATCGCTGATGACGAACATGGTCACGCAGCGCACGCAGACCGAGCTCGGCATCACCGGCACGCAGGCGACGA TGCTGTTCATGCTCGCCGTGGGCAAGTGCTCGACGGCGGCCGAGCTGGCGCGCGAGTACGGCATCGACGCGAGCGCGATC ACGCGGCTGCTCGATCGCGTCGAGAAGCGCGGCTTGCTGCAGCGGGTGCGCAGCAGCGAAGACCGGCGCGTCGTGCGGCT CGAGCTGACCGACGAGGGACGCGCGCTCACCAAGCGCATGCCGGCGATCTTTCGCAGCGTGCTCGACGAAGTGCTCGACG GCTTCACGCCCGAGGAAGTCGGCTTCCTCAAGAGCATGCTGCGCCGCATTCTCGTGAATTCGGGCGAATGTCCGGGCGCG ACCGGAAGCACCTCGTAA
Upstream 100 bases:
>100_bases TGCAGCCCTGCAACCAAATCGCCGTTCAATTAACATTTGTCGCAGCAACTATTCGTGCCTATAATGCTGCCTAGTCAACT ATTGCAGCTTCAGAGAATTT
Downstream 100 bases:
>100_bases ATATTGCCATAACAAGCAATTTAGATAGATAAATGTAAGGAAATCCTTGCAGTGTCCATTATCCACTCCGAATCAGATGC CGAGCCAGGAAACCCACCGA
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; MarR Transcriptional Regulator; Multiple Antibiotic Resistance Protein; Transcriptional Regulators; Transcription Regulator; Transcriptional Regulator Marr Family; MarR Family Regulatory Helix-Turn-Helix
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSDPSSPQPDQDLALYQINDSVGYLMSRVKSLMTNMVTQRTQTELGITGTQATMLFMLAVGKCSTAAELAREYGIDASAI TRLLDRVEKRGLLQRVRSSEDRRVVRLELTDEGRALTKRMPAIFRSVLDEVLDGFTPEEVGFLKSMLRRILVNSGECPGA TGSTS
Sequences:
>Translated_165_residues MSDPSSPQPDQDLALYQINDSVGYLMSRVKSLMTNMVTQRTQTELGITGTQATMLFMLAVGKCSTAAELAREYGIDASAI TRLLDRVEKRGLLQRVRSSEDRRVVRLELTDEGRALTKRMPAIFRSVLDEVLDGFTPEEVGFLKSMLRRILVNSGECPGA TGSTS >Mature_164_residues SDPSSPQPDQDLALYQINDSVGYLMSRVKSLMTNMVTQRTQTELGITGTQATMLFMLAVGKCSTAAELAREYGIDASAIT RLLDRVEKRGLLQRVRSSEDRRVVRLELTDEGRALTKRMPAIFRSVLDEVLDGFTPEEVGFLKSMLRRILVNSGECPGAT GSTS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18205; Mature: 18074
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSSPQPDQDLALYQINDSVGYLMSRVKSLMTNMVTQRTQTELGITGTQATMLFMLAV CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GKCSTAAELAREYGIDASAITRLLDRVEKRGLLQRVRSSEDRRVVRLELTDEGRALTKRM CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH PAIFRSVLDEVLDGFTPEEVGFLKSMLRRILVNSGECPGATGSTS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SDPSSPQPDQDLALYQINDSVGYLMSRVKSLMTNMVTQRTQTELGITGTQATMLFMLAV CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GKCSTAAELAREYGIDASAITRLLDRVEKRGLLQRVRSSEDRRVVRLELTDEGRALTKRM CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHH PAIFRSVLDEVLDGFTPEEVGFLKSMLRRILVNSGECPGATGSTS HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA