Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126451863

Identifier: 126451863

GI number: 126451863

Start: 1386163

End: 1386573

Strand: Direct

Name: 126451863

Synonym: BURPS1106A_1411

Alternate gene names: NA

Gene position: 1386163-1386573 (Clockwise)

Preceding gene: 126452405

Following gene: 126455390

Centisome position: 34.75

GC content: 71.29

Gene sequence:

>411_bases
ATGATCAAGCGCAAGCTCATCGCCTTCGCCGCCGCGCCCGCGCTGGCGCTCGCCGCGTTCGGCATCGGCACGGTGTCGCC
GGCAGGCGTCGCGCCGAGCATGGCCGAAGCCGCGACCGTCTCGAAGCTCGGCGATCTGTCGCCGTTCCGTGCGATCGCCG
TCGACGTCGCGCAACGCGTCGACAAGGGTGACCTCGCCGGCGCGAAGGCGCGCATCAAGGATCTGGAAACGTCGTGGGAC
AATGCGGAGCCGTCGCTCAAGCCGCGCGCGGCGGCCGACTGGCACGCGGTCGACCACGCGATCGATCGCGCGCTCACCGC
GCTGCGCGCCGACAGGCCGCAAGCTGGCGCATGCAGGCAGGCGCTCGCCGATTTGCTCGCGGTTATCGATCGGCCAGGCG
GTGCACGCTGA

Upstream 100 bases:

>100_bases
TTGCTGCTGTTGACGTTGACGTTGACGTTGACGTTGACGCAAACCGGAGGCGGCGTCGTATGCCACCGTTTCATTCGAGT
TCAACACGAGGAGGTTTGTC

Downstream 100 bases:

>100_bases
GTACGGCATGCGGCATGCCATACTCAGCGTGAGGGGTGACGTGTGACGTAGCCGGCTTGCGCCGTGACGGCCCGCCTACG
AAATGCGCGGGAGGGCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIKRKLIAFAAAPALALAAFGIGTVSPAGVAPSMAEAATVSKLGDLSPFRAIAVDVAQRVDKGDLAGAKARIKDLETSWD
NAEPSLKPRAAADWHAVDHAIDRALTALRADRPQAGACRQALADLLAVIDRPGGAR

Sequences:

>Translated_136_residues
MIKRKLIAFAAAPALALAAFGIGTVSPAGVAPSMAEAATVSKLGDLSPFRAIAVDVAQRVDKGDLAGAKARIKDLETSWD
NAEPSLKPRAAADWHAVDHAIDRALTALRADRPQAGACRQALADLLAVIDRPGGAR
>Mature_136_residues
MIKRKLIAFAAAPALALAAFGIGTVSPAGVAPSMAEAATVSKLGDLSPFRAIAVDVAQRVDKGDLAGAKARIKDLETSWD
NAEPSLKPRAAADWHAVDHAIDRALTALRADRPQAGACRQALADLLAVIDRPGGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14044; Mature: 14044

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRKLIAFAAAPALALAAFGIGTVSPAGVAPSMAEAATVSKLGDLSPFRAIAVDVAQRV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DKGDLAGAKARIKDLETSWDNAEPSLKPRAAADWHAVDHAIDRALTALRADRPQAGACRQ
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALADLLAVIDRPGGAR
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIKRKLIAFAAAPALALAAFGIGTVSPAGVAPSMAEAATVSKLGDLSPFRAIAVDVAQRV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC
DKGDLAGAKARIKDLETSWDNAEPSLKPRAAADWHAVDHAIDRALTALRADRPQAGACRQ
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
ALADLLAVIDRPGGAR
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA