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The map label for this gene is ugpA [C]

Identifier: 126451853

GI number: 126451853

Start: 2979412

End: 2980350

Strand: Reverse

Name: ugpA [C]

Synonym: BURPS1106A_3050

Alternate gene names: 126451853

Gene position: 2980350-2979412 (Counterclockwise)

Preceding gene: 126451928

Following gene: 126452728

Centisome position: 74.72

GC content: 65.07

Gene sequence:

>939_bases
GTGGCTGCCCCTCTTAGCGGAAACGGAACCAGCGCGGCTGCCGCGCACCGCACGTCGCCGCTGTCGGCGTTCGCCGACCG
CTGGATTCCGAAACTGGTGCTCGCGCCGAGCGTCGCGATCGCCTTGATCTTCATCTACGGCTTCATCGCCGTCACCGGCT
ATCTGTCGCTGACGAATTCCCGACTGTTGCCGAACTACGACTTCGACGGCTTCGGCCGCTATTCCGACCTGTTCGGCAAC
GACGTGTGGTGGACCTCGGCCGCGAACCTCGGCTGGTTCGGCGTCCCGTTCATCGGGATCTGCGTCGTGCTGGGCCTGTT
CCTCGCGATCCTGCTCGATCAGAAGATCCGCAACGAAGGCGCGCTGCGCGCGGTGTTCCTGTATCCGATGGCGCTGTCGT
TCATCGTCACGGGCACCGCGTGGCAGTGGATCCTGAACCCGGGCCTCGGCCTCGAGAAGGTGATGCACGACTGGGGCTTC
ACGAACTTCTCGTTCGGCTGGCTCGACGATCCGGACAAGGCGATCTTCTGCGTCGTGATCGCGGCCGTCTGGCAATCGAC
GGGCTTCGTGATGGCGCTGTTCCTCGCCGGCCTGCGCGGCGTCGACGGCGAGATTTTCAAGGCCGCGCAGGTCGACGGCG
CGACGCTGCCGACGATCTACCGCAAGATCGTGATCCCGAGCATGCGCCCGGTGTTCTTCTCGGTGCTGCTGATCCTCTGC
CATATCACGATCAAGACCTTCGACCTCGTCGTCGCGCTGACGGCGGGCGGGCCGGGCACGTCCTCGTCGCTGCCCGCGAT
GTTCATGTACACGTATTCGTTCAACCGCGGGCAGCTCGGCGTCGGCGCGGCGTCGTCGGTGATGATGCTCGCCACCGTCG
TGGCGGTGCTCGTGCCGCTCATGTACCTGGAATCGAGGAGCACCCGCAATGCAGCCTAA

Upstream 100 bases:

>100_bases
CATCCGCAGCAAACGGGCCGCGAGTCGGCTCGCGCCGTACCCGTCGCCCGCGCCGGCTTCGTGCCCGCGCGCGGCGATCT
CGTCCCAGGAGTCGAAACAC

Downstream 100 bases:

>100_bases
GATGACCCTGAGTCGGGCAGTCATTTACGCGGCGCTGATCCTGTTCGCGTTGTACTTCCTGTTTCCGATCTACGTGATGC
TGTCGACGTCGTTCAAGGAT

Product: carbohydrate ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MAAPLSGNGTSAAAAHRTSPLSAFADRWIPKLVLAPSVAIALIFIYGFIAVTGYLSLTNSRLLPNYDFDGFGRYSDLFGN
DVWWTSAANLGWFGVPFIGICVVLGLFLAILLDQKIRNEGALRAVFLYPMALSFIVTGTAWQWILNPGLGLEKVMHDWGF
TNFSFGWLDDPDKAIFCVVIAAVWQSTGFVMALFLAGLRGVDGEIFKAAQVDGATLPTIYRKIVIPSMRPVFFSVLLILC
HITIKTFDLVVALTAGGPGTSSSLPAMFMYTYSFNRGQLGVGAASSVMMLATVVAVLVPLMYLESRSTRNAA

Sequences:

>Translated_312_residues
MAAPLSGNGTSAAAAHRTSPLSAFADRWIPKLVLAPSVAIALIFIYGFIAVTGYLSLTNSRLLPNYDFDGFGRYSDLFGN
DVWWTSAANLGWFGVPFIGICVVLGLFLAILLDQKIRNEGALRAVFLYPMALSFIVTGTAWQWILNPGLGLEKVMHDWGF
TNFSFGWLDDPDKAIFCVVIAAVWQSTGFVMALFLAGLRGVDGEIFKAAQVDGATLPTIYRKIVIPSMRPVFFSVLLILC
HITIKTFDLVVALTAGGPGTSSSLPAMFMYTYSFNRGQLGVGAASSVMMLATVVAVLVPLMYLESRSTRNAA
>Mature_311_residues
AAPLSGNGTSAAAAHRTSPLSAFADRWIPKLVLAPSVAIALIFIYGFIAVTGYLSLTNSRLLPNYDFDGFGRYSDLFGND
VWWTSAANLGWFGVPFIGICVVLGLFLAILLDQKIRNEGALRAVFLYPMALSFIVTGTAWQWILNPGLGLEKVMHDWGFT
NFSFGWLDDPDKAIFCVVIAAVWQSTGFVMALFLAGLRGVDGEIFKAAQVDGATLPTIYRKIVIPSMRPVFFSVLLILCH
ITIKTFDLVVALTAGGPGTSSSLPAMFMYTYSFNRGQLGVGAASSVMMLATVVAVLVPLMYLESRSTRNAA

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=27.3648648648649, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1787570, Length=242, Percent_Identity=24.3801652892562, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33735; Mature: 33604

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPLSGNGTSAAAAHRTSPLSAFADRWIPKLVLAPSVAIALIFIYGFIAVTGYLSLTNS
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLLPNYDFDGFGRYSDLFGNDVWWTSAANLGWFGVPFIGICVVLGLFLAILLDQKIRNEG
CCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALRAVFLYPMALSFIVTGTAWQWILNPGLGLEKVMHDWGFTNFSFGWLDDPDKAIFCVVI
CCHHHHHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
AAVWQSTGFVMALFLAGLRGVDGEIFKAAQVDGATLPTIYRKIVIPSMRPVFFSVLLILC
HHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
HITIKTFDLVVALTAGGPGTSSSLPAMFMYTYSFNRGQLGVGAASSVMMLATVVAVLVPL
HHHHHHEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
MYLESRSTRNAA
HHHHCCCCCCCC
>Mature Secondary Structure 
AAPLSGNGTSAAAAHRTSPLSAFADRWIPKLVLAPSVAIALIFIYGFIAVTGYLSLTNS
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RLLPNYDFDGFGRYSDLFGNDVWWTSAANLGWFGVPFIGICVVLGLFLAILLDQKIRNEG
CCCCCCCCCCCCCHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
ALRAVFLYPMALSFIVTGTAWQWILNPGLGLEKVMHDWGFTNFSFGWLDDPDKAIFCVVI
CCHHHHHHHHHHHHHHHCCHHEEHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
AAVWQSTGFVMALFLAGLRGVDGEIFKAAQVDGATLPTIYRKIVIPSMRPVFFSVLLILC
HHHHHCCHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
HITIKTFDLVVALTAGGPGTSSSLPAMFMYTYSFNRGQLGVGAASSVMMLATVVAVLVPL
HHHHHHEEEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
MYLESRSTRNAA
HHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]