Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126451835

Identifier: 126451835

GI number: 126451835

Start: 1680761

End: 1682293

Strand: Reverse

Name: 126451835

Synonym: BURPS1106A_1721

Alternate gene names: NA

Gene position: 1682293-1680761 (Counterclockwise)

Preceding gene: 126454121

Following gene: 126454450

Centisome position: 42.18

GC content: 64.51

Gene sequence:

>1533_bases
ATGATTAATGCGAAAACGGGCTTTCTATTTTTTATTTTCGTGATGAGCCTGATCGGATGCCGCCCGGCATTCGCCCAAAC
CAATACGCCGGTCACCGGCATCGATCTGGGCGGCGAAATCATCGAGATCATCAAGCAGAATCCGCAAGATCCGACACAGG
CGATCAACAATTACATGTCCGGCGTCGCCGCGACGAACGTGCGCTGGGTGCGCATTCATCTCGACTGGTCGGCCATCCAG
CCGGCGTCGACGTGGATCTTCACGAGCGACCCCAATCCCGGCCGGAGCAGCGGCCTCACCTGGGGCGCGACGGACATCGT
CGTGCGGGCGGCCCGGAATTACGGAATACGCATTCTCGGCGTGATCACGTCGACGCCGCGCTGGGCCACCCACGCGCAAT
GTCCGAGCTACTACCGGCAATCGACCGACGACGCCTACAAGCTTTGCGCGCCGAATCTCACGTCGTACACGAACTTCGCG
CGCGCCGCCGCCAAGCATTACGGCAACGACAGCTACGGCGGAAAGATCGACGCGTGGGAAATCTGGAACGAGCCGAACTG
CGGCCCGAACTTCATTCCTCACGATCCGGTCCTTTATACGCGGCTCGTGAAGAGCGCATACCCGGCGATCAAGCAGGCCA
ATCCGTCGGCGTCCGTCTATGCGGGCGGCAGCTCGGGGTGCCTCACGTCGCCGAACAACGGCACCGGCGCGCTGCCGTCG
AGCGGCGTGGCCGGCCTCGTGAACTCGACGGACGTCCGCTACCCCGCGCCCACGCAGTGGGAGCCGCGCGACTGGCTGGC
CGTGATGTACGCGAACGGCGCGAGCGGGTATTTCGACGGACTCGCGCACCATCCCCACTGCCACAGCGACGACTGGCAAC
TGCCGGGCGACCAGTGCCCGAGCACGACCGTCAACTCCGTGTACCCGGATTACTCGAATCCGTTCAACATCATGTGGCAC
ACGTTCGCCTCGCCTTCGTACGGTTGGCCCGCTCCGACCGGCAAGACGTTCGCCAGCTATACGGGAACGAGCCTGCGCGA
GCTGATGAACGCGAACGGCGACGGGGGAAAACCGATCGTGATCACCGAGTTCGGCGTCGCGACAACCGCGTCGGACGGCG
CGACCGATTTCACCGGCCAGTTGGGCGGCAGTGCGCAGCAATACGCAAACGCCGATTTTCAGACGATCGCGCCGGCGTAC
CTGACGCAGGCGAATCAGGAACGCGAGTACAAGGCGCTGATCGCCTGGATCGCCAATCAGCCCTACGGCCAGTACGGCCC
GGTTTACGCGTACTGCTACTCGGACATGGCGCTGTCGTCGCCGTATAGCGCGAACATCTACGAGCCGTATTTCGGCCTGG
TGACGATCACCGCGTCGACGGCCACCTCCGGCACGACGGGCGCGCCCAAGATCGCCGGCGCGTATCAGGCCGCATCGGGG
CAGTATTACCCGGCCTGGCCCAACTTCGGCGCCGCCGCAACGGCGGCGGCCAATCACACGCCGGGCTATGCGCCGGTCGG
CCCCGGCTGGTGA

Upstream 100 bases:

>100_bases
GCCGCGCGGCCGCCCGCATCGGCCGCGCCCCGAGTCTCGAACCGACCATTCCATTCAATTCACCGACCATTCCATTCAAT
TCATCAGGCCGAGTTAATTC

Downstream 100 bases:

>100_bases
CGCATCGGGCAAGGCGAACGAGAAAACCGGCGGCCGCCCACCGGCGTGCGGGCGCATCGCGTCAGGCGCGGTAGCCGCCG
GGCGGGCGCTTTCGGCTCCG

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDVRYPAPTQWEPRDWLAVMYANGASGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLVTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW

Sequences:

>Translated_510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDVRYPAPTQWEPRDWLAVMYANGASGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLVTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
>Mature_510_residues
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMSGVAATNVRWVRIHLDWSAIQ
PASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILGVITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFA
RAAAKHYGNDSYGGKIDAWEIWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
SGVAGLVNSTDVRYPAPTQWEPRDWLAVMYANGASGYFDGLAHHPHCHSDDWQLPGDQCPSTTVNSVYPDYSNPFNIMWH
TFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIVITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAY
LTQANQEREYKALIAWIANQPYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLVTITASTATSGTTGAPKIAGAYQAASG
QYYPAWPNFGAAATAAANHTPGYAPVGPGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54723; Mature: 54723

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
GVAATNVRWVRIHLDWSAIQPASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILG
CHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFARAAAKHYGNDSYGGKIDAWE
EEECCCCCCCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
IWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
SGVAGLVNSTDVRYPAPTQWEPRDWLAVMYANGASGYFDGLAHHPHCHSDDWQLPGDQCP
CCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCC
STTVNSVYPDYSNPFNIMWHTFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIV
CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEE
ITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAYLTQANQEREYKALIAWIANQ
EEECCCEECCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHCC
PYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLVTITASTATSGTTGAPKIAGAYQAASG
CCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCC
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MINAKTGFLFFIFVMSLIGCRPAFAQTNTPVTGIDLGGEIIEIIKQNPQDPTQAINNYMS
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHH
GVAATNVRWVRIHLDWSAIQPASTWIFTSDPNPGRSSGLTWGATDIVVRAARNYGIRILG
CHHHCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEE
VITSTPRWATHAQCPSYYRQSTDDAYKLCAPNLTSYTNFARAAAKHYGNDSYGGKIDAWE
EEECCCCCCCCCCCHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEE
IWNEPNCGPNFIPHDPVLYTRLVKSAYPAIKQANPSASVYAGGSSGCLTSPNNGTGALPS
ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCC
SGVAGLVNSTDVRYPAPTQWEPRDWLAVMYANGASGYFDGLAHHPHCHSDDWQLPGDQCP
CCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCC
STTVNSVYPDYSNPFNIMWHTFASPSYGWPAPTGKTFASYTGTSLRELMNANGDGGKPIV
CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHCCCHHHHHHHCCCCCCCCEEE
ITEFGVATTASDGATDFTGQLGGSAQQYANADFQTIAPAYLTQANQEREYKALIAWIANQ
EEECCCEECCCCCCCCCCCCCCCCHHHHCCCCHHHHCHHHHHHCCCHHHHHHHHHHHHCC
PYGQYGPVYAYCYSDMALSSPYSANIYEPYFGLVTITASTATSGTTGAPKIAGAYQAASG
CCCCCCCEEEEEECCHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHCCC
QYYPAWPNFGAAATAAANHTPGYAPVGPGW
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA