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The map label for this gene is infA

Identifier: 126451819

GI number: 126451819

Start: 1117750

End: 1118016

Strand: Direct

Name: infA

Synonym: BURPS1106A_1139

Alternate gene names: 126451819

Gene position: 1117750-1118016 (Clockwise)

Preceding gene: 126454943

Following gene: 126453665

Centisome position: 28.02

GC content: 58.8

Gene sequence:

>267_bases
ATGGCCAAAGAAGAATTGATCGAACTCGACGGGATCGTCGATGAAGTCTTGCCGGATAGCCGTTACCGCGTCACGCTCGA
CAACGGTGTGGTGGTGGGCGCTTATGCGTCGGGTCAGATGCGCAGGCATCGCATACGCATTCTCGCGGGAGATCGCGTCA
CGCTGGAATTGTCGGTCTATGACCTCACGAAAGGGCGGATCAATTTCCGCCACAAGGACGAGCGAAGAAGCGATGCGGCG
CCGAGGGCATCGGCTCGTCGTCGTTGA

Upstream 100 bases:

>100_bases
TTCCAGATAACGCGGGCGCTCGCCGGCACGGCGACCGCTGTTTTCCCTCCATCCACCCGGACATCGCGAAGCGGTGTTTC
GGTCTACACAGGAACCTTGC

Downstream 100 bases:

>100_bases
CGCGTTTCGGCGGCGGCGCATGACCTTGCTTTGCCGGCGGGCGGTCGACGTGCCACGCGGTTTGGCGGTCCAGTCACAAT
GCGATGCGCTCATCGAGGCG

Product: translation initiation factor IF-1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MAKEELIELDGIVDEVLPDSRYRVTLDNGVVVGAYASGQMRRHRIRILAGDRVTLELSVYDLTKGRINFRHKDERRSDAA
PRASARRR

Sequences:

>Translated_88_residues
MAKEELIELDGIVDEVLPDSRYRVTLDNGVVVGAYASGQMRRHRIRILAGDRVTLELSVYDLTKGRINFRHKDERRSDAA
PRASARRR
>Mature_87_residues
AKEELIELDGIVDEVLPDSRYRVTLDNGVVVGAYASGQMRRHRIRILAGDRVTLELSVYDLTKGRINFRHKDERRSDAAP
RASARRR

Specific function: No specific function has so far been attributed to this initiation factor; however, it seems to stimulate more or less all the activities of the other two initiation factors, IF-2 and IF-3

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain

Homologues:

Organism=Escherichia coli, GI1787110, Length=70, Percent_Identity=60, Blast_Score=87, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): IF11_BURMA (Q62HQ3)

Other databases:

- EMBL:   CP000010
- RefSeq:   YP_103767.1
- ProteinModelPortal:   Q62HQ3
- SMR:   Q62HQ3
- GeneID:   3089946
- GenomeReviews:   CP000010_GR
- KEGG:   bma:BMA2202
- TIGR:   BMA2202
- HOGENOM:   HBG286099
- OMA:   KNNPKRN
- ProtClustDB:   PRK12442
- BioCyc:   BMAL243160:BMA_2202-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00075
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR022967
- InterPro:   IPR006196
- InterPro:   IPR004368
- Gene3D:   G3DSA:2.40.50.140
- SMART:   SM00316
- TIGRFAMs:   TIGR00008

Pfam domain/function: PF01176 eIF-1a; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 10079; Mature: 9947

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50832 S1_IF1_TYPE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEELIELDGIVDEVLPDSRYRVTLDNGVVVGAYASGQMRRHRIRILAGDRVTLELSVY
CCHHHHHHHCCHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEECCEEEEEEEEE
DLTKGRINFRHKDERRSDAAPRASARRR
ECCCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKEELIELDGIVDEVLPDSRYRVTLDNGVVVGAYASGQMRRHRIRILAGDRVTLELSVY
CHHHHHHHCCHHHHHCCCCCEEEEECCCEEEEEECCCCCEEEEEEEEECCEEEEEEEEE
DLTKGRINFRHKDERRSDAAPRASARRR
ECCCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA