| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451708
Identifier: 126451708
GI number: 126451708
Start: 222623
End: 224125
Strand: Direct
Name: 126451708
Synonym: BURPS1106A_0238
Alternate gene names: NA
Gene position: 222623-224125 (Clockwise)
Preceding gene: 126454593
Following gene: 126452833
Centisome position: 5.58
GC content: 78.51
Gene sequence:
>1503_bases ATGACCGGTATCGACACCGCTGCCGCCGCCATCCTGGCGAGCCGCATCGACAGCCTTCTCGACGCGATCCAGCCCGCCGC GGGCGGCGCGGCGGCGCCGCAGGTGGGCACCTCCGGCGCGCCGCCCGCCTCCGCGGCGCCTCGGCCTGCCGCGAGCGGGC CGCCGCCCGCCTCCGCGCAGACCGCGCTCTCCGAGGTCGGACTCACGCTTGACGCGATTTCCCGCTACGGCGGCGCGGCG ACGCCGGCCGTCGTCGGCGCCGCGCCGTTGTTGCCTGCGGCGCCCACCGCCGTTGCCGCGCAGGCGGCGTCGCTCGATCC GCTGCTCGCGACGCCCGACGCTCGCGCCGGCAATCCGGCGGCCGCGACGGCGCCGGGCGCGCAAGCCGCGCAGGCGGCCC CGCAAGCGGCGTTGCCCGCGTCGCCCGCCGCCGCGCTGAGCCTCGCGCTCGTGCAGGCCGTCGCGCAGAGCGGCCTCTTC TACGAATCCCATCTCGCCCAATGGCTCGCCGGCCAGCGCACGACGGCCGAGCTCGCGCGCGAGCCGCAGGCGCGGCTCGC AAGCGGCGCCGAGCCGGACGCTCAGGCCGGCGCGCAACCTGGCCAGATGGGCGACGCGCTCGACGACGCGCTCGCCGATC TGCTCGCCGTGCGGTTGCCGCTGCCGCAGGGCGGGCGCGATGCGCCCGCGCGGGGCGCCGCGCGCCCGCCGGGGCAGCCG GCTGGCGGCGCGGACGAAGGCGCGGCGGCATCCGGCCGCGCGCCGACGAACGCGGCGGCGCCCGCGCGCTCCGTCGATGC CTATGCGGCGCTTGCCGACGCCGACGGCAAGCCCGGCGCGCCGTCAGCGCAAACGGCGCTCGCGCGCGCCGGCATGCCGC CGACGGGCGCCGACACGCCGGCGTCGATCGCGGCTTCGCTGCATGCGGCGACGCTGCCGATCGTGCGCCAGCAGCTCGAT CTGCTCGCGACCGACCAGTTTCGCTGGATCGGCGAAGCGTGGCCGGGCGCGCGGCTCGACTGGACGATCGAGCCGGACGA GCAGCACGGCCGCGAGCGGCCCGCGCCCGACGCGGATTTCCCGGATGCGCGCGGCTGGCGCACGCGGCTGACGCTCGCGC TGCCGTCGCTCGGCACGATCGACGCGGAACTCGTGCTGAACGGCGAGCAGCTCGCCGCGCGGCTGCGCGCGAGCGAAGCG GGCGCGGCGCGGCTCGCGCCGCACGGCGAGGCGCTGCGCGCGCGGCTGCAGGCGCTCGGGCTGCAGGTGAGCGGCCTGTC GATCCGCGCGATCGACGGCGTGCCGGACAGCTTCGACGCGGCGGCCGCGCGGGCGGCGGCATCCGCGTATGCGCGTGCGG CGGCGGGCGGCGAAGCAGTGGCGAAGGACGGGTTCGGAGGCGCAGCCGGCGCGACGGGTGGGGCGGGCGGAGCGGGCGTT GAGCATCGCGCATCGTCGTCGTCGCCGGTCGAGACCGACGACGACTGGGAGTTCGCGCAATGA
Upstream 100 bases:
>100_bases CGCGCCGCCGCCTTCGGGCGCGCCGGCTCGCGCGGACGAACGGCGCGCGTTCGTCGCCGCGGATGGCCCGGAATTCATTC GGCGCGCGTCAGGATTCACG
Downstream 100 bases:
>100_bases GCGGGCCGCCGCGCAAGCGGGCCGCGGTGCTCGCGTACGACGCGAAGGGCGGCGACACCGCGCCGCGCGTCGTCGCGAAG GGCTACGGGCTCGTCGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MTGIDTAAAAILASRIDSLLDAIQPAAGGAAAPQVGTSGAPPASAAPRPAASGPPPASAQTALSEVGLTLDAISRYGGAA TPAVVGAAPLLPAAPTAVAAQAASLDPLLATPDARAGNPAAATAPGAQAAQAAPQAALPASPAAALSLALVQAVAQSGLF YESHLAQWLAGQRTTAELAREPQARLASGAEPDAQAGAQPGQMGDALDDALADLLAVRLPLPQGGRDAPARGAARPPGQP AGGADEGAAASGRAPTNAAAPARSVDAYAALADADGKPGAPSAQTALARAGMPPTGADTPASIAASLHAATLPIVRQQLD LLATDQFRWIGEAWPGARLDWTIEPDEQHGRERPAPDADFPDARGWRTRLTLALPSLGTIDAELVLNGEQLAARLRASEA GAARLAPHGEALRARLQALGLQVSGLSIRAIDGVPDSFDAAAARAAASAYARAAAGGEAVAKDGFGGAAGATGGAGGAGV EHRASSSSPVETDDDWEFAQ
Sequences:
>Translated_500_residues MTGIDTAAAAILASRIDSLLDAIQPAAGGAAAPQVGTSGAPPASAAPRPAASGPPPASAQTALSEVGLTLDAISRYGGAA TPAVVGAAPLLPAAPTAVAAQAASLDPLLATPDARAGNPAAATAPGAQAAQAAPQAALPASPAAALSLALVQAVAQSGLF YESHLAQWLAGQRTTAELAREPQARLASGAEPDAQAGAQPGQMGDALDDALADLLAVRLPLPQGGRDAPARGAARPPGQP AGGADEGAAASGRAPTNAAAPARSVDAYAALADADGKPGAPSAQTALARAGMPPTGADTPASIAASLHAATLPIVRQQLD LLATDQFRWIGEAWPGARLDWTIEPDEQHGRERPAPDADFPDARGWRTRLTLALPSLGTIDAELVLNGEQLAARLRASEA GAARLAPHGEALRARLQALGLQVSGLSIRAIDGVPDSFDAAAARAAASAYARAAAGGEAVAKDGFGGAAGATGGAGGAGV EHRASSSSPVETDDDWEFAQ >Mature_499_residues TGIDTAAAAILASRIDSLLDAIQPAAGGAAAPQVGTSGAPPASAAPRPAASGPPPASAQTALSEVGLTLDAISRYGGAAT PAVVGAAPLLPAAPTAVAAQAASLDPLLATPDARAGNPAAATAPGAQAAQAAPQAALPASPAAALSLALVQAVAQSGLFY ESHLAQWLAGQRTTAELAREPQARLASGAEPDAQAGAQPGQMGDALDDALADLLAVRLPLPQGGRDAPARGAARPPGQPA GGADEGAAASGRAPTNAAAPARSVDAYAALADADGKPGAPSAQTALARAGMPPTGADTPASIAASLHAATLPIVRQQLDL LATDQFRWIGEAWPGARLDWTIEPDEQHGRERPAPDADFPDARGWRTRLTLALPSLGTIDAELVLNGEQLAARLRASEAG AARLAPHGEALRARLQALGLQVSGLSIRAIDGVPDSFDAAAARAAASAYARAAAGGEAVAKDGFGGAAGATGGAGGAGVE HRASSSSPVETDDDWEFAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48998; Mature: 48867
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGIDTAAAAILASRIDSLLDAIQPAAGGAAAPQVGTSGAPPASAAPRPAASGPPPASAQ CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH TALSEVGLTLDAISRYGGAATPAVVGAAPLLPAAPTAVAAQAASLDPLLATPDARAGNPA HHHHHHCHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCC AATAPGAQAAQAAPQAALPASPAAALSLALVQAVAQSGLFYESHLAQWLAGQRTTAELAR CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH EPQARLASGAEPDAQAGAQPGQMGDALDDALADLLAVRLPLPQGGRDAPARGAARPPGQP CHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGGADEGAAASGRAPTNAAAPARSVDAYAALADADGKPGAPSAQTALARAGMPPTGADTP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCH ASIAASLHAATLPIVRQQLDLLATDQFRWIGEAWPGARLDWTIEPDEQHGRERPAPDADF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCCC PDARGWRTRLTLALPSLGTIDAELVLNGEQLAARLRASEAGAARLAPHGEALRARLQALG CCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHC LQVSGLSIRAIDGVPDSFDAAAARAAASAYARAAAGGEAVAKDGFGGAAGATGGAGGAGV CEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC EHRASSSSPVETDDDWEFAQ CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TGIDTAAAAILASRIDSLLDAIQPAAGGAAAPQVGTSGAPPASAAPRPAASGPPPASAQ CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH TALSEVGLTLDAISRYGGAATPAVVGAAPLLPAAPTAVAAQAASLDPLLATPDARAGNPA HHHHHHCHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCC AATAPGAQAAQAAPQAALPASPAAALSLALVQAVAQSGLFYESHLAQWLAGQRTTAELAR CCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHH EPQARLASGAEPDAQAGAQPGQMGDALDDALADLLAVRLPLPQGGRDAPARGAARPPGQP CHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC AGGADEGAAASGRAPTNAAAPARSVDAYAALADADGKPGAPSAQTALARAGMPPTGADTP CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCH ASIAASLHAATLPIVRQQLDLLATDQFRWIGEAWPGARLDWTIEPDEQHGRERPAPDADF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCCC PDARGWRTRLTLALPSLGTIDAELVLNGEQLAARLRASEAGAARLAPHGEALRARLQALG CCCCCCEEEEEEECCCCCCCCCEEEECHHHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHC LQVSGLSIRAIDGVPDSFDAAAARAAASAYARAAAGGEAVAKDGFGGAAGATGGAGGAGV CEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCC EHRASSSSPVETDDDWEFAQ CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA