| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451693
Identifier: 126451693
GI number: 126451693
Start: 2160015
End: 2160821
Strand: Direct
Name: 126451693
Synonym: BURPS1106A_2174
Alternate gene names: NA
Gene position: 2160015-2160821 (Clockwise)
Preceding gene: 126454829
Following gene: 126455357
Centisome position: 54.16
GC content: 73.61
Gene sequence:
>807_bases ATGTTGATTTCTCTGGTGTTGGGCAGCATCGTCGGCGCGGTGCTGGGGCTGACGGGCGCGGGCGGCGGCATTCTCGCCGT GCCGGCGCTCGTCGTCGGAATGGGCTGGCCGATGCAGCAGGCGACGCCCGTGGCGCTCGTCGCGGTCGCGGGCAGCGCCG CGCTCGGCGCGCTCGAAGGCTTTCGGCGCGGGCTCGTGCGCTATCGCGCGGCATTCCTGATGGCGGCGGCCGGCGTGCCG CTGACGACGCTCGGCGTGCGCGTCGCGCACAGGCTGCCGCAGCGCGTGCTGCTCGCGCTCTTCGCGCTCGTGATGCTCGT CGTCGCGGTGCGCCTGCTGCGCCAGGCGCTCAGGCATGCCGCCGGCGAGCCGGCTTGCTCGCCGCTGTGCGTCGGCCGGG TCAATCCGGACACGGGGCGCCTCGTCTGGTCGTGGCCCGCCGGTATCGCGCTCGCGTCGACGGGCGCGCTGACGGGGCTG ATGACGGGCCTGCTCGGCGTCGGCGGCGGCTTCGTGATCGTGCCGATGCTGCGCAAGTTCACGAACGTGACGATGCACGG CATCGTCGCGACGTCGCTGATGGTGATCGCGCTCGTCGGCACGGGCGGCGTGATCGCGACGATCGCGAGCGGCACGCCCG CGCCGCTCGACGTCACGCTGTGGTTCACCGCGACGACCGCGCTCGGCATGGCGGCCGGACGCTGGGTGTCGCGCTACCTG TCCGCGCGGCACGTGCAACTGGGCTTCGCCGCCGCGCTCGTGTGCGTCGCGGCGGGGCTCCTCGCGAAAGCGGCGCTCGG TTTCTGA
Upstream 100 bases:
>100_bases TTACTGGCAGGCGATGCTCAAGGGCCGCGAATGGCTCGCGAAACCCGAGATCGTCGGCTGACCGCCGCGCTTTGACGACC CTTGTCCGGAACGGCGCAGC
Downstream 100 bases:
>100_bases GGCCGCAAGCGGCGCGCAGAGCGGCCGTGCATGCGCGCGACGGCAAAACGGCGCGCAGAGCGCGCCAGCGCGTTGACGAA AAAAGCCCGGGCGGCCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL SARHVQLGFAAALVCVAAGLLAKAALGF
Sequences:
>Translated_268_residues MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL SARHVQLGFAAALVCVAAGLLAKAALGF >Mature_268_residues MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEGFRRGLVRYRAAFLMAAAGVP LTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHAAGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGL MTGLLGVGGGFVIVPMLRKFTNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL SARHVQLGFAAALVCVAAGLLAKAALGF
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27057; Mature: 27057
Theoretical pI: Translated: 12.29; Mature: 12.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH FRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPMLRKF CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SARHVQLGFAAALVCVAAGLLAKAALGF HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLISLVLGSIVGAVLGLTGAGGGILAVPALVVGMGWPMQQATPVALVAVAGSAALGALEG CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHH FRRGLVRYRAAFLMAAAGVPLTTLGVRVAHRLPQRVLLALFALVMLVVAVRLLRQALRHA HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AGEPACSPLCVGRVNPDTGRLVWSWPAGIALASTGALTGLMTGLLGVGGGFVIVPMLRKF CCCCCCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH TNVTMHGIVATSLMVIALVGTGGVIATIASGTPAPLDVTLWFTATTALGMAAGRWVSRYL HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH SARHVQLGFAAALVCVAAGLLAKAALGF HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA