Click here to switch to the map view.

The map label for this gene is phbC [H]

Identifier: 126451661

GI number: 126451661

Start: 2190783

End: 2192597

Strand: Reverse

Name: phbC [H]

Synonym: BURPS1106A_2203

Alternate gene names: 126451661

Gene position: 2192597-2190783 (Counterclockwise)

Preceding gene: 126452453

Following gene: 126453858

Centisome position: 54.97

GC content: 67.71

Gene sequence:

>1815_bases
ATGCAACAGTTGTTCGAGTCCTGGCTCGGCGCGTGGCGCAGCTTCGCGGACCCGGCCCGGGCGGCCGCGGGCGACGCACC
GTCGCCGTCGCCGTCGCCGTTCGCGGCGTTCCAGCCGCCGCAGCCGTTTGCGTTCGCGATGCCTGCGATGCCGCCGATGC
CGCCGATGCCGGATTGGTCCGGCGCGGCCGCGTCGTTCGCGGGGCTCGCGCCCGTCGCGTCGGTGCCGCCCGCGCGGCTG
CAGAAGCTGCAGGCCGATTATTCGCGCGATTGCCTCGCGCTGATCCAGCAGGCGAGCGCCGCGACGCCGACCGTTCCCGA
GCTGAAGGACCGGCGTTTCAGCGCGGACGCCTGGAAGGCATCACCCGCGCACGGGTTCGCGGCCGCCTGGTATCTGCTGA
ACGCGCGCTACCTGCAGGAGCTCGCGGACGCGCTCGAGACCGACCCGAAGACGCGCGAGCGGATCCGCTTCACGGTCCAG
CAGTGGACGGCCGCCGCGTCGCCGAGCAACTTCCTCGCGCTCAATCCGGAGGCGCAGAAGAATCTCGTCGAGACGCAGGG
CGAGAGCCTGCGTCTCGGGATGATGAACCTGCTCGCCGACATGCAGCGCGGCAAGATTTCGCAGACGGACGAATCGCAAT
TCGTCGTCGGCAAGAATCTCGCGGTGACGCCGGGCGCGGTCGTCTACGAGAACGATCTGATCCAGTTGATCCAGTACACG
CCCACGACAGCCACCGTCTTCGAGCGGCCGCTGCTCATCGTGCCGCCGTGCATCAACAAGTTCTACATCCTCGATCTGCA
GCCGGAGAATTCGCTCGTCGCGCACGCGCTGTCGTGCGGCCATCAGGTGTTCCTCGTGTCGTGGCGCAATGCCGACGCGT
CGGTCGCGCACAAGACGTGGGACGACTACATCGACGAGGGCCTGCTCGCCGCGATCGACGTCGTCCAGCAGGTGAGCGGG
CGCGAGCAGATCAACACGCTCGGCTTCTGCGTCGGCGGCACGATGCTTGCGACGGCGCTCGCGGTGCTCGCCGCGCGCGG
CGAGCACCCGGCCGCGTCGATGACGCTGCTCACCTCGATGCTCGACTTCTCCGACACGGGCATTCTCGACGTGTTCGTCG
ACGAGGCGCACGTGCAGATGCGCGAGCAGACCATCGGCGGCAAGGGCGGCGCGCCCGCGGGCTTGATGCGCGGCGTCGAG
TTCGCGAACACGTTTTCGTTTCTGCGTCCGAACGATCTCGTGTGGAACTATGTCGTCGACAACTACCTGAAGGGCCGCAC
GCCCGCGCCGTTCGATCTGCTGTACTGGAACGGCGATTCGACGAGCCTGCCCGGCCCGATGTACGCGTGGTATCTGCGGA
ATACCTATCTCGAAAACAAGCTGCGCGAGCCGGATGCGCTCACGGTGTGCGGCGAGCCCGTCGATCTGTCGCGCATCGAC
GTGCCGACGTTCATCTACGGCTCGCGCGAGGATCACATCGTGCCGTGGCAGACCGCGTACGCGTCGACGTCGCTGCTGAC
GGGGCCGCTGAAGTTCGTGCTGGGCGCGTCGGGCCACATCGCAGGCGTGATCAATCCGCCCGCGAAGCGCAAGCGCAGCT
ACTGGAGCTACGACGCGAGCGCGAAGGAGCTGCCGGAATCGGCGAACGACTGGCTCGATGCGGCCGTCGAGCACCCTGGC
AGTTGGTGGCCGGTATGGATCGAGTGGCTCGATCAGTACGGCGGCAAGAAGGTGAAGCCGCGCGCGCACCTCGGCTGCGC
GCGCTTCCCGGTGATCGAGCCCGCGCCCGGCCGATATGTGTTGCAACGCGATTGA

Upstream 100 bases:

>100_bases
CACCGTTAAGGCAGGTATGACAGCATCGAAAAAATCGTCGACGTCCTCTCACACGGATACTCCCCAGGGTCGCAGCACAG
CCGGATCGGCGGCCCAGCCC

Downstream 100 bases:

>100_bases
CGAACGGCGCAAGGCGGAGCACGCTTTGCGTCGCGACCGATTTTTAACAGGGCGGTTCGCGGCGCGCCGTGCCGCGCGCG
CCCGGAGGATAGTGAAATGA

Product: Poly-beta-hydroxybutyrate polymerase

Products: NA

Alternate protein names: PHA synthase; PHB synthase; Poly(3-hydroxyalkanoate) polymerase; PHA polymerase; Poly(3-hydroxybutyrate) polymerase; PHB polymerase; Polyhydroxyalkanoic acid synthase [H]

Number of amino acids: Translated: 604; Mature: 604

Protein sequence:

>604_residues
MQQLFESWLGAWRSFADPARAAAGDAPSPSPSPFAAFQPPQPFAFAMPAMPPMPPMPDWSGAAASFAGLAPVASVPPARL
QKLQADYSRDCLALIQQASAATPTVPELKDRRFSADAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQ
QWTAAASPSNFLALNPEAQKNLVETQGESLRLGMMNLLADMQRGKISQTDESQFVVGKNLAVTPGAVVYENDLIQLIQYT
PTTATVFERPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADASVAHKTWDDYIDEGLLAAIDVVQQVSG
REQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTSMLDFSDTGILDVFVDEAHVQMREQTIGGKGGAPAGLMRGVE
FANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRID
VPTFIYGSREDHIVPWQTAYASTSLLTGPLKFVLGASGHIAGVINPPAKRKRSYWSYDASAKELPESANDWLDAAVEHPG
SWWPVWIEWLDQYGGKKVKPRAHLGCARFPVIEPAPGRYVLQRD

Sequences:

>Translated_604_residues
MQQLFESWLGAWRSFADPARAAAGDAPSPSPSPFAAFQPPQPFAFAMPAMPPMPPMPDWSGAAASFAGLAPVASVPPARL
QKLQADYSRDCLALIQQASAATPTVPELKDRRFSADAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQ
QWTAAASPSNFLALNPEAQKNLVETQGESLRLGMMNLLADMQRGKISQTDESQFVVGKNLAVTPGAVVYENDLIQLIQYT
PTTATVFERPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADASVAHKTWDDYIDEGLLAAIDVVQQVSG
REQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTSMLDFSDTGILDVFVDEAHVQMREQTIGGKGGAPAGLMRGVE
FANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRID
VPTFIYGSREDHIVPWQTAYASTSLLTGPLKFVLGASGHIAGVINPPAKRKRSYWSYDASAKELPESANDWLDAAVEHPG
SWWPVWIEWLDQYGGKKVKPRAHLGCARFPVIEPAPGRYVLQRD
>Mature_604_residues
MQQLFESWLGAWRSFADPARAAAGDAPSPSPSPFAAFQPPQPFAFAMPAMPPMPPMPDWSGAAASFAGLAPVASVPPARL
QKLQADYSRDCLALIQQASAATPTVPELKDRRFSADAWKASPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQ
QWTAAASPSNFLALNPEAQKNLVETQGESLRLGMMNLLADMQRGKISQTDESQFVVGKNLAVTPGAVVYENDLIQLIQYT
PTTATVFERPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADASVAHKTWDDYIDEGLLAAIDVVQQVSG
REQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTSMLDFSDTGILDVFVDEAHVQMREQTIGGKGGAPAGLMRGVE
FANTFSFLRPNDLVWNYVVDNYLKGRTPAPFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRID
VPTFIYGSREDHIVPWQTAYASTSLLTGPLKFVLGASGHIAGVINPPAKRKRSYWSYDASAKELPESANDWLDAAVEHPG
SWWPVWIEWLDQYGGKKVKPRAHLGCARFPVIEPAPGRYVLQRD

Specific function: Polymerizes d(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation [H]

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PHA/PHB synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR010963
- InterPro:   IPR010941 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07167 PhaC_N [H]

EC number: NA

Molecular weight: Translated: 66353; Mature: 66353

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLFESWLGAWRSFADPARAAAGDAPSPSPSPFAAFQPPQPFAFAMPAMPPMPPMPDWS
CHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
GAAASFAGLAPVASVPPARLQKLQADYSRDCLALIQQASAATPTVPELKDRRFSADAWKA
CCHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
SPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHH
NLVETQGESLRLGMMNLLADMQRGKISQTDESQFVVGKNLAVTPGAVVYENDLIQLIQYT
HHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCEEEHHHHHHHHHCC
PTTATVFERPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADASVAHKTW
CCHHHHHCCCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
DDYIDEGLLAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTSM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LDFSDTGILDVFVDEAHVQMREQTIGGKGGAPAGLMRGVEFANTFSFLRPNDLVWNYVVD
HCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NYLKGRTPAPFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRID
HHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
VPTFIYGSREDHIVPWQTAYASTSLLTGPLKFVLGASGHIAGVINPPAKRKRSYWSYDAS
CCEEEECCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCC
AKELPESANDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRAHLGCARFPVIEPAPGRYV
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEE
LQRD
EECC
>Mature Secondary Structure
MQQLFESWLGAWRSFADPARAAAGDAPSPSPSPFAAFQPPQPFAFAMPAMPPMPPMPDWS
CHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
GAAASFAGLAPVASVPPARLQKLQADYSRDCLALIQQASAATPTVPELKDRRFSADAWKA
CCHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCC
SPAHGFAAAWYLLNARYLQELADALETDPKTRERIRFTVQQWTAAASPSNFLALNPEAQK
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHH
NLVETQGESLRLGMMNLLADMQRGKISQTDESQFVVGKNLAVTPGAVVYENDLIQLIQYT
HHHHHCCCCEEHHHHHHHHHHHCCCCCCCCCCCEEECCCEEECCCCEEEHHHHHHHHHCC
PTTATVFERPLLIVPPCINKFYILDLQPENSLVAHALSCGHQVFLVSWRNADASVAHKTW
CCHHHHHCCCCEEECCCCCCEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCHHHHHHH
DDYIDEGLLAAIDVVQQVSGREQINTLGFCVGGTMLATALAVLAARGEHPAASMTLLTSM
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LDFSDTGILDVFVDEAHVQMREQTIGGKGGAPAGLMRGVEFANTFSFLRPNDLVWNYVVD
HCCCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
NYLKGRTPAPFDLLYWNGDSTSLPGPMYAWYLRNTYLENKLREPDALTVCGEPVDLSRID
HHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
VPTFIYGSREDHIVPWQTAYASTSLLTGPLKFVLGASGHIAGVINPPAKRKRSYWSYDAS
CCEEEECCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCCCCCC
AKELPESANDWLDAAVEHPGSWWPVWIEWLDQYGGKKVKPRAHLGCARFPVIEPAPGRYV
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCEE
LQRD
EECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2670936; 1987116 [H]