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The map label for this gene is ycgB [H]

Identifier: 126451642

GI number: 126451642

Start: 1831607

End: 1833289

Strand: Direct

Name: ycgB [H]

Synonym: BURPS1106A_1875

Alternate gene names: 126451642

Gene position: 1831607-1833289 (Clockwise)

Preceding gene: 126452511

Following gene: 126451842

Centisome position: 45.92

GC content: 63.46

Gene sequence:

>1683_bases
ATGACGACACGCCACCTGCACAACGAGGCGCGCGGCTACGAGCCGCGGCGCCGGAGCGACGAAGCGTCGGGGGCCGCCGC
GCACGAGCGCGACGCATCGCCCGAAGCGGCGGCGCAGCACCCAGAAGCGCCCGCGAGCGGGCTCAAGGAAGCGCGTATGA
ACGTTGCCGACCGCAAACCGTTGCCGTGTCCGTCCGATTGGACGTTCGAGCTGATCGAGGAGTACGACACCCACATCTCG
CAGGTCGCGGAGCAGTACGAGCTCGACATCTATCCGATCCAGCTCGAGCTGATCAGCGCCGAGCAGATGATGGACGCGTA
CGCGTCGGTGGGAATGCCCGTGAACTACCGTCACTGGTCGTTCGGCAAGCACTTCCTGTCGACCGAGAAGAGCTACCGCC
GCGGGCAGATGGGGCTCGCGTACGAGATCGTCATCAACTCGAACCCGTGCATCGCGTATCTGATGGAAGAGAACACGATG
ACGATGCAGGCGCTCGTCATCGCGCACGCGGCGTACGGGCACAACTCGTTCTTCAAGGGCAACTACCTGTTCCGGCTGTG
GACCGACGCGCACGCGATCATCGATTATCTCGTGTACGCGAAGAACTACGTCGCCGAATGCGAGGAGCGCTACGGGCTCG
ATCGCGTCGAGGAACTGCTCGACTCGTGCCATGCGCTGATGAATTACGGCGTCGACCGCTACAAGCGGCCGCAGAAGCCG
TCGCTCGCGAAGGAATCCGAGCTCAGGCGCGAGCGCGAGGCGTATCTGCAGTCGCAGGTCAACGAGCTGTGGCGCACGCT
GCCCGCGAAGAAGCCCGAGTTCGCCGACGAGGAGCAGGAAGAGCGCTATCCGCCCGAGCCGCAGGAAAACCTGCTGTATT
TCGCGGAGAAGAACGCGCCGTTCCTCGAACCGTGGGAGCGCGAAGTGATCCGGATCGTGCGCAAGATCGGCCAGTACTTC
TATCCGCAGCGGCAGACGCAGGTGATGAACGAGGGTTGGGCGACGTTCTGGCACTACACGCTGCTCAACACGATGTACAA
CCAGGGCAAGCTCGCGGACGGCTTCATGATGGAGTTCCTCCATTCGCACAGCAACGTGATCTACCAGCCGCCCGTGACGA
AGCCGTACTACAGCGGGATCAATCCGTACGCGCTCGGCTTTTCGATGATGAGCGACATCCGCCGGATCTGCGAGGCGCCG
ACCGAAGAGGACCACAAGTGGTTCCCCGAGCTCGCGGGCAGCCCGTGGCTGCCGGCGCTCCACTATGCGATGCGCAACTT
CAAGGACGAGAGCTTCATCGCGCAATACCTGTCGCCGCATCTGATCCGCGAGATGCGCCTGTTCTCGGTGCTCGACGACG
ACATGCGCGACGCGCTCGAGGTGTCGGCGATCCACGACGATTCCGGCTATCAGTACGTGCGGCAGGCGTTGTCGCGGCAG
TACGACATCCATCATCGCGAGCCGAACATCCAGGTGTGGTCGGTCAACACGCGCGGCGACCGCAGCCTCACGCTGCGCCA
CTTCATGACCGACAACCGGCATCTGTCGAACGACAGCGAAGAGGTGCTCAAGCACATGGCGCGGCTCTGGCAGTTCGACG
TGTACCTCGAGAGCGTCGACGAGACGGGGACGGTCCGCAAGCGCTACGAGTGCCGCTATACCGCGCCGGAAATCCGGCTC
TGA

Upstream 100 bases:

>100_bases
TGGCGTTGTCACAACCGCATCTCGCGATGAAGAAAGTGGAATCGGCTGCCGACATCTACCCCGTGTTCCGGGAACTCTTT
GAAAAGCACGTGGAAACCTG

Downstream 100 bases:

>100_bases
CGGACGACGGGACGGCGCGCGCCGGCGGCCGGGCCCGCGCGTCCGGCCGCCGCGAAGCTGGATCGGCCGGAGCGATCGAG
CCGGCTCGGCCGCGTCGCTT

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MTTRHLHNEARGYEPRRRSDEASGAAAHERDASPEAAAQHPEAPASGLKEARMNVADRKPLPCPSDWTFELIEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLLYFAEKNAPFLEPWEREVIRIVRKIGQYF
YPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAP
TEEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQYVRQALSRQ
YDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDETGTVRKRYECRYTAPEIRL

Sequences:

>Translated_560_residues
MTTRHLHNEARGYEPRRRSDEASGAAAHERDASPEAAAQHPEAPASGLKEARMNVADRKPLPCPSDWTFELIEEYDTHIS
QVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTM
TMQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
SLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLLYFAEKNAPFLEPWEREVIRIVRKIGQYF
YPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAP
TEEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQYVRQALSRQ
YDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDETGTVRKRYECRYTAPEIRL
>Mature_559_residues
TTRHLHNEARGYEPRRRSDEASGAAAHERDASPEAAAQHPEAPASGLKEARMNVADRKPLPCPSDWTFELIEEYDTHISQ
VAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWSFGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMT
MQALVIAHAAYGHNSFFKGNYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKPS
LAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLLYFAEKNAPFLEPWEREVIRIVRKIGQYFY
PQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFLHSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPT
EEDHKWFPELAGSPWLPALHYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQYVRQALSRQY
DIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVDETGTVRKRYECRYTAPEIRL

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=486, Percent_Identity=65.0205761316872, Blast_Score=694, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 65849; Mature: 65718

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRHLHNEARGYEPRRRSDEASGAAAHERDASPEAAAQHPEAPASGLKEARMNVADRKP
CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCC
LPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCH
FGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLLYFAEKNAP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCEEEEEECCCC
FLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFL
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELAGSPWLPAL
HHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHH
HYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQYVRQALSRQ
HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
YDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVD
CCCCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ETGTVRKRYECRYTAPEIRL
CCCCHHHHHCCEECCCCCCC
>Mature Secondary Structure 
TTRHLHNEARGYEPRRRSDEASGAAAHERDASPEAAAQHPEAPASGLKEARMNVADRKP
CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHCCCCCCC
LPCPSDWTFELIEEYDTHISQVAEQYELDIYPIQLELISAEQMMDAYASVGMPVNYRHWS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHCCCCCCCCCCH
FGKHFLSTEKSYRRGQMGLAYEIVINSNPCIAYLMEENTMTMQALVIAHAAYGHNSFFKG
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEECC
NYLFRLWTDAHAIIDYLVYAKNYVAECEERYGLDRVEELLDSCHALMNYGVDRYKRPQKP
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHCCCCCC
SLAKESELRREREAYLQSQVNELWRTLPAKKPEFADEEQEERYPPEPQENLLYFAEKNAP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHCEEEEEECCCC
FLEPWEREVIRIVRKIGQYFYPQRQTQVMNEGWATFWHYTLLNTMYNQGKLADGFMMEFL
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HSHSNVIYQPPVTKPYYSGINPYALGFSMMSDIRRICEAPTEEDHKWFPELAGSPWLPAL
HHCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCHHHH
HYAMRNFKDESFIAQYLSPHLIREMRLFSVLDDDMRDALEVSAIHDDSGYQYVRQALSRQ
HHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHH
YDIHHREPNIQVWSVNTRGDRSLTLRHFMTDNRHLSNDSEEVLKHMARLWQFDVYLESVD
CCCCCCCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
ETGTVRKRYECRYTAPEIRL
CCCCHHHHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]