| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451596
Identifier: 126451596
GI number: 126451596
Start: 1872312
End: 1873022
Strand: Reverse
Name: 126451596
Synonym: BURPS1106A_1916
Alternate gene names: NA
Gene position: 1873022-1872312 (Counterclockwise)
Preceding gene: 126454805
Following gene: 126452006
Centisome position: 46.96
GC content: 66.53
Gene sequence:
>711_bases ATGGTGCCAGCCCGCCATTGTCATGTCGCGGTATTCGATCAGGCGATCGTCGCGCTCGATATACGACGGTCGCGCTATTT TCTTTATGACGCAGCGTGCGCGAGGGATTTCGCCGATCATTATCTGGATTTCAAGCCGATCGACGCGCCGCGCGCATTGA AACCGCTGATCGCCGACCGAATCCTCGTCGCCGAATCGCCGGCGGCCGCGCGAAGCCGCATCGCCGATTACCGCGGCTGG AGCTTCGACGCATTCGATTCCGGCATCTGGGGCAGCCGGGTGCTCGGCAAGCGCGATGCCGCCCGCTTCGAATGGCTGCC GTTCTGGCGCATCGTGCGCAGCGCGGCGTCGCTCAAGATGCGCGGCTTTCACGCGCTCGCGGCGCTCGATCGGCTCGACG CCCGCGGCGCGCCGGCGCGCGGCGACGACGCGTCGCACACGGTCGAGCGCTTGCTGCGCGCGTCGATCTGGTCGCCCTTT CGCATCACGTGCGTGCAAATGTCGCTCGCGCTCGCCACGCATCTGCGGCGGCAGAACGTGCCCGCCCAACTCGTGATCGG CGTGAGGCCGATGCCGTTCGTCGCCCATGCATGGGTCGAAGTCGACGGGCGCGTGTGCGGCGACGAACCGGACCTGAAAA AGAGCTATGGCGAAATCTATCGAACGCCTCGATGCGACGCATCCGCCGCCCCGTTCGGGCTGGCGGCTTGA
Upstream 100 bases:
>100_bases TTCCAAACCCCGGACGCACGCGTCATTTCGCGCTTCGGGTTCAATTAATTAGCCTCTCTTGAAGCGGGTGGGGCATTTTG CCCCACCGCAATAAATAACC
Downstream 100 bases:
>100_bases ACGGCGCGCGTGGACGGACGCGGCCGCGCATCGCGGCCTGCTGTCCCGCGCGGCCGGCCCCGATCGGCCGATCGGCGTGA CGCTGCTCGAAGCGGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPARGDDASHTVERLLRASIWSPF RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA
Sequences:
>Translated_236_residues MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPARGDDASHTVERLLRASIWSPF RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA >Mature_236_residues MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADRILVAESPAAARSRIADYRGW SFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKMRGFHALAALDRLDARGAPARGDDASHTVERLLRASIWSPF RITCVQMSLALATHLRRQNVPAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26374; Mature: 26374
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADR CCCCCHHHHHHHHHHHHHEEHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ILVAESPAAARSRIADYRGWSFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKM HEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RGFHALAALDRLDARGAPARGDDASHTVERLLRASIWSPFRITCVQMSLALATHLRRQNV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC PAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA CEEEEECCCCCCHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MVPARHCHVAVFDQAIVALDIRRSRYFLYDAACARDFADHYLDFKPIDAPRALKPLIADR CCCCCHHHHHHHHHHHHHEEHHCCEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ILVAESPAAARSRIADYRGWSFDAFDSGIWGSRVLGKRDAARFEWLPFWRIVRSAASLKM HEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHH RGFHALAALDRLDARGAPARGDDASHTVERLLRASIWSPFRITCVQMSLALATHLRRQNV HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC PAQLVIGVRPMPFVAHAWVEVDGRVCGDEPDLKKSYGEIYRTPRCDASAAPFGLAA CEEEEECCCCCCHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA