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The map label for this gene is rssA [H]

Identifier: 126451567

GI number: 126451567

Start: 832076

End: 833392

Strand: Direct

Name: rssA [H]

Synonym: BURPS1106A_0851

Alternate gene names: 126451567

Gene position: 832076-833392 (Clockwise)

Preceding gene: 126452671

Following gene: 126454420

Centisome position: 20.86

GC content: 72.67

Gene sequence:

>1317_bases
GTGAGGTCGATTCGCCATCAATTGCTGATCTGGCTGCTCGCGATCGTCGTGGCCGGCGTGGGGCTCGCCGGCTGGATGAT
CTACCGGCAGGCGCTTGCCGCCGCCAACGAGCTGTTCGACTATCAGCTGCAGCAGATCGCGGCCGCGCTGCCGTCCGAGC
CGTTCTCGCAGGTGCTCGGCTCGCAGACGAACGGCGACGAAGGGATCGTGATCCAGATCTGGAACCGCAACGGCGTGCTG
ATGTACTTCTCGCATCCGCGCGCGCCGATCGCCCCGCGCGCCGAGCTCGGCTTCTCGACCGAGCGCACCGAGCGCGGCGC
GTGGCGCGTGTACGGCGCGATCGTCGGCGACAACGTCGTGCAGCTCGCGCAGCCGCTATCGGTGCGCAACCGGCTCGCCG
CGAGCGTCGCGCTGCGCACGCTCTGGCCGCTCATCGTGCTGCTGCCCTTCCTCGGCGCGGCCGTCTGGATGATCGTCGGG
CGCGGGCTCGCGCCGCTGCAGCGCGTGACCCGCGCAGTCGAGGCACGCCGGCCCGAGGCGCTCGATCCGCTGCCCGATTC
GCCGCTGCCGCTCGAGGTGCGTCCGCTCGTGCGCGCGCTCAACGGGCTGCTTGCACGGCTGTCGGCCGCGCTCGACACGC
AAAAGGCGTTCGTCGCGGACGCCGCGCACGAGCTGCGCACGCCGCTTGCCGCCGTGCAGATTCAGGCGCAACTCGTCGCG
CGTGCGCAGGACGACGTGTCGCGCCGCGAGGCGATCGTCGATCTGCAAAGCGGCGTCACGCGCGCGACGCGCCTCGCCGA
GCAGTTGCTCGCGCTCGCGCGCGCCGAACCCGGCGACGCGACGGTGCGCGAGCGCGTCGATCTGCGCGCGATCGTCGAAG
AGTGCGTCGCCGCACACGCGCCGCTCGCGCAGCGGCGCGACATCGATCTGGGCTTCGAGCGGGTCGAGGACGCGAGCGTG
GACGCCGATCCCGCCGCGTTGCGCGTGATGTTCAACAACCTGCTCGACAACGCGGTGAAGTACACGCCGGCGGGCGGGCG
CATCGACGTGTCGCTCACGCGCGGCGAAGGCGCGCGTGCGTGCGTGCAGATTGGCGACAGCGGCCCCGGCATCCCGGCCG
CCGAGCGCGAGCGCGTATTCGATCGTTTCTACCGCGACACGTCCGCGCGGGCGCGCACCGACGTCGCGGGCAGCGGCCTC
GGTCTCGCGATCGTCAAGCGGGTGGCCGCGCAGCAGCGCGCGAGCGTGACGCTCGGCGAGGCGGCGGCGGGCGGGCTGCT
CGTCAGCGTCTCGCTGCCGTGCGTGGGCCCCGCGTGA

Upstream 100 bases:

>100_bases
CGTCGAGGTCTATATCCACGCGCTGCGCAAGAAGCTCGGCTCGGACCTGATCCGCAACGTCCGCGGCCTCGGCTACATGG
TCGTGAAGGAAGCGTAGCGC

Downstream 100 bases:

>100_bases
CGCATGGGCCGCCGTGGCGGAGCCGCGACGGCGGGCAGGCGTGTCCGCGCGCGGCCCGGCGCGCGCGAAGGCTTCTGGCG
CAACCGCTTTGACCGCGGCA

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 438

Protein sequence:

>438_residues
MRSIRHQLLIWLLAIVVAGVGLAGWMIYRQALAAANELFDYQLQQIAAALPSEPFSQVLGSQTNGDEGIVIQIWNRNGVL
MYFSHPRAPIAPRAELGFSTERTERGAWRVYGAIVGDNVVQLAQPLSVRNRLAASVALRTLWPLIVLLPFLGAAVWMIVG
RGLAPLQRVTRAVEARRPEALDPLPDSPLPLEVRPLVRALNGLLARLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVA
RAQDDVSRREAIVDLQSGVTRATRLAEQLLALARAEPGDATVRERVDLRAIVEECVAAHAPLAQRRDIDLGFERVEDASV
DADPAALRVMFNNLLDNAVKYTPAGGRIDVSLTRGEGARACVQIGDSGPGIPAAERERVFDRFYRDTSARARTDVAGSGL
GLAIVKRVAAQQRASVTLGEAAAGGLLVSVSLPCVGPA

Sequences:

>Translated_438_residues
MRSIRHQLLIWLLAIVVAGVGLAGWMIYRQALAAANELFDYQLQQIAAALPSEPFSQVLGSQTNGDEGIVIQIWNRNGVL
MYFSHPRAPIAPRAELGFSTERTERGAWRVYGAIVGDNVVQLAQPLSVRNRLAASVALRTLWPLIVLLPFLGAAVWMIVG
RGLAPLQRVTRAVEARRPEALDPLPDSPLPLEVRPLVRALNGLLARLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVA
RAQDDVSRREAIVDLQSGVTRATRLAEQLLALARAEPGDATVRERVDLRAIVEECVAAHAPLAQRRDIDLGFERVEDASV
DADPAALRVMFNNLLDNAVKYTPAGGRIDVSLTRGEGARACVQIGDSGPGIPAAERERVFDRFYRDTSARARTDVAGSGL
GLAIVKRVAAQQRASVTLGEAAAGGLLVSVSLPCVGPA
>Mature_438_residues
MRSIRHQLLIWLLAIVVAGVGLAGWMIYRQALAAANELFDYQLQQIAAALPSEPFSQVLGSQTNGDEGIVIQIWNRNGVL
MYFSHPRAPIAPRAELGFSTERTERGAWRVYGAIVGDNVVQLAQPLSVRNRLAASVALRTLWPLIVLLPFLGAAVWMIVG
RGLAPLQRVTRAVEARRPEALDPLPDSPLPLEVRPLVRALNGLLARLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVA
RAQDDVSRREAIVDLQSGVTRATRLAEQLLALARAEPGDATVRERVDLRAIVEECVAAHAPLAQRRDIDLGFERVEDASV
DADPAALRVMFNNLLDNAVKYTPAGGRIDVSLTRGEGARACVQIGDSGPGIPAAERERVFDRFYRDTSARARTDVAGSGL
GLAIVKRVAAQQRASVTLGEAAAGGLLVSVSLPCVGPA

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=451, Percent_Identity=30.3769401330377, Blast_Score=171, Evalue=1e-43,
Organism=Escherichia coli, GI1786783, Length=295, Percent_Identity=30.5084745762712, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1790551, Length=262, Percent_Identity=32.824427480916, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1788393, Length=246, Percent_Identity=31.3008130081301, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788279, Length=307, Percent_Identity=27.3615635179153, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1790861, Length=306, Percent_Identity=31.6993464052288, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1789808, Length=250, Percent_Identity=30.4, Blast_Score=99, Evalue=8e-22,
Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=30.9417040358744, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1787374, Length=285, Percent_Identity=26.3157894736842, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI87082128, Length=254, Percent_Identity=29.1338582677165, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1790346, Length=238, Percent_Identity=27.3109243697479, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1788713, Length=249, Percent_Identity=25.7028112449799, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=25.6521739130435, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1786912, Length=224, Percent_Identity=30.3571428571429, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1787894, Length=236, Percent_Identity=27.5423728813559, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788549, Length=225, Percent_Identity=24.8888888888889, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1789149, Length=212, Percent_Identity=25, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=32.618025751073, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI48994928, Length=227, Percent_Identity=22.0264317180617, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790436, Length=218, Percent_Identity=26.1467889908257, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47059; Mature: 47059

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSIRHQLLIWLLAIVVAGVGLAGWMIYRQALAAANELFDYQLQQIAAALPSEPFSQVLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
SQTNGDEGIVIQIWNRNGVLMYFSHPRAPIAPRAELGFSTERTERGAWRVYGAIVGDNVV
CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEHHHHCCHHH
QLAQPLSVRNRLAASVALRTLWPLIVLLPFLGAAVWMIVGRGLAPLQRVTRAVEARRPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LDPLPDSPLPLEVRPLVRALNGLLARLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RAQDDVSRREAIVDLQSGVTRATRLAEQLLALARAEPGDATVRERVDLRAIVEECVAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLAQRRDIDLGFERVEDASVDADPAALRVMFNNLLDNAVKYTPAGGRIDVSLTRGEGARA
CHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEE
CVQIGDSGPGIPAAERERVFDRFYRDTSARARTDVAGSGLGLAIVKRVAAQQRASVTLGE
EEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCEEECC
AAAGGLLVSVSLPCVGPA
CCCCCEEEEEECCCCCCC
>Mature Secondary Structure
MRSIRHQLLIWLLAIVVAGVGLAGWMIYRQALAAANELFDYQLQQIAAALPSEPFSQVLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC
SQTNGDEGIVIQIWNRNGVLMYFSHPRAPIAPRAELGFSTERTERGAWRVYGAIVGDNVV
CCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEHHHHCCHHH
QLAQPLSVRNRLAASVALRTLWPLIVLLPFLGAAVWMIVGRGLAPLQRVTRAVEARRPEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LDPLPDSPLPLEVRPLVRALNGLLARLSAALDTQKAFVADAAHELRTPLAAVQIQAQLVA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
RAQDDVSRREAIVDLQSGVTRATRLAEQLLALARAEPGDATVRERVDLRAIVEECVAAHA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
PLAQRRDIDLGFERVEDASVDADPAALRVMFNNLLDNAVKYTPAGGRIDVSLTRGEGARA
CHHHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECCCCCEE
CVQIGDSGPGIPAAERERVFDRFYRDTSARARTDVAGSGLGLAIVKRVAAQQRASVTLGE
EEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCEEECC
AAAGGLLVSVSLPCVGPA
CCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA