| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451564
Identifier: 126451564
GI number: 126451564
Start: 3875469
End: 3875792
Strand: Reverse
Name: 126451564
Synonym: BURPS1106A_3973
Alternate gene names: NA
Gene position: 3875792-3875469 (Counterclockwise)
Preceding gene: 126453360
Following gene: 126453214
Centisome position: 97.18
GC content: 58.02
Gene sequence:
>324_bases ATGCCGAAGCAATCGGCGGCAATCGTCGTGATTGCCGCTTTCTCGGAGCGATGGAATCGTCGCGCTACATTATCTCCGAC GTATCTCGAAATCAATCGAGCCTGCCATCGCGGCACGTGCCGGATTCGACACGTACAGCAGGCGAATCCGGGCGTTCCGC ACGCGCGCCGGACGCGCCGATACAGTCGACATCGAGAAATGTACGGAATCGAAACGCATCGATGCATCGCGCAACGCGCG CGCTGTTGCAGTCGCTCGACATTCGGCACTTTTTTGTTGTCGGGCGTGCACGGTTGCCGTTATCGTTGCGCACTACGACA ATAA
Upstream 100 bases:
>100_bases GCAGGGGCTGGCCATCGATCGTGACGAAAGGCATGTCGATAAGGTCGCTAGGCAATGAATCGGTTAAGGGAGTTCGGGCG AACGCGCGGAATCGATGCGC
Downstream 100 bases:
>100_bases TTGCGTGCTGTGAGAGCTTAGTGGCGACACATAAAAAAAGTTCACGCCTGGCTTCATTCAGGCATCGGGGGGCGGCGGAC GCGATCGGGCCGGCGGCATG
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MPKQSAAIVVIAAFSERWNRRATLSPTYLEINRACHRGTCRIRHVQQANPGVPHARRTRRYSRHREMYGIETHRCIAQRA RCCSRSTFGTFLLSGVHGCRYRCALRQ
Sequences:
>Translated_107_residues MPKQSAAIVVIAAFSERWNRRATLSPTYLEINRACHRGTCRIRHVQQANPGVPHARRTRRYSRHREMYGIETHRCIAQRA RCCSRSTFGTFLLSGVHGCRYRCALRQ >Mature_106_residues PKQSAAIVVIAAFSERWNRRATLSPTYLEINRACHRGTCRIRHVQQANPGVPHARRTRRYSRHREMYGIETHRCIAQRAR CCSRSTFGTFLLSGVHGCRYRCALRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12428; Mature: 12296
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 6.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKQSAAIVVIAAFSERWNRRATLSPTYLEINRACHRGTCRIRHVQQANPGVPHARRTRR CCCCCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH YSRHREMYGIETHRCIAQRARCCSRSTFGTFLLSGVHGCRYRCALRQ HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEECCC >Mature Secondary Structure PKQSAAIVVIAAFSERWNRRATLSPTYLEINRACHRGTCRIRHVQQANPGVPHARRTRR CCCCCEEEEEEECHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHH YSRHREMYGIETHRCIAQRARCCSRSTFGTFLLSGVHGCRYRCALRQ HHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA