| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451557
Identifier: 126451557
GI number: 126451557
Start: 356014
End: 357705
Strand: Direct
Name: 126451557
Synonym: BURPS1106A_0393
Alternate gene names: NA
Gene position: 356014-357705 (Clockwise)
Preceding gene: 126453603
Following gene: 126452607
Centisome position: 8.93
GC content: 68.26
Gene sequence:
>1692_bases ATGCATGGAGGGTATGGCGGCCTCGCGCGCCCGCGCGGCCGGATGCCGGCGACGGCCGCCGTTGCCGCCGCGTTGCTGCT CGCGCTCGGCGGGTGCGGCGACGATCTGCAGAGCACCACGACGCCCGCGCAGCTCAATCAACCGTACACGGACACGACCG CGTATTCGCCGAAGGCGGGCGATGGGCTGCCGGCGTCGCAGGTATCCGAACGCGCCGCGGTGATGAGCCACCAGTGGACG GCGAACGGCGCGAGCGTCGATTACCTGACGACGACCGGCCACCTGACGGCCACCGATCCGAACGGCAACGCGGAGGCGAC GATGTCGTACGTCGCGTATACGGCGCCGAGCCGCGACGGCTCGCCGCGGCCCGTCACGTTCTTCTACAACGGGGGGCCGG GCTCGTCGTCGGTGTGGCTGCGGCTCGGCTCGTTCGCGCCGACGCGGGTCGCGACGCCCGATCCGCTGATGACGAACTGG CCGAATTTCCCGCTCGTCGACAACCCGGAGAGCCTGATCGCGACCACCGACATGGTGTTCATCGATCCGCCGGGCACGGG CCTGTCGGAGGCGATCCAGCCGAACACGAACCAGACGTTCTGGGGAGCGGACGCCGACGTGAAGGTGATGCGCGATTTCA TTCGCCGCTACCTGTCGGTCAACGGCCGCGGCGGCTCGCCGATCTATCTGTACGGCGAATCGTACGGCACGCCGCGCACG GATATGCTCGCGCTCGCGCTCGAATCGGCGGGCGTGCCGCTCACGGGCATCGTGCTGCAGTCGTCGATCCTGAACTACAT GGCGGCCGCGGGCGACCAGGCGGTGGGCACCTTTCCGTCGTACGCGCAGGTGGCCGCATACTTCAACCAGGTGTCGCCGT CGCCGACGAATCTGGGCGCGTATGCGCAGCGCATCGAGAATTTCGTGACCGCGCAGTACGCGCCGATCGTGCATTACGCG ACGGCTTCGTCGCCGATCTCGCCGGACGCCGGCACGCTCGCCGCGTGGTCGTCGCAAACGGGCATGGCCACCGCGTCGAT CGGCGCGTACTTCCAGTATTTCTACGATACGGAGCCGTCGCCCGGCCAGACGACGCTCGTGCCCGGCTACACGATCGGCC GCTACGACGGCCGCGTGTCGCTGCCGAACGGCGACGCGCGCCTCGCGAGCGACGACGATCCGTCCGACATCCTGATCTCG AAGCCGTTCACGAGCGCGCTCGCGTCGCAGATGCCGAACTACCTCGGCTACACCGCGCCGAACGCGACGTATCAGACGCT CAATCCCGACATCATCGGCGTGTGGAACTTCAGCCACGCGGGCCAGCCGTATCCGGACACGATCCCGGATCTGCTTGCCG CGCTGCAACTGAATCCGAAGCTGAAGGTGCTCGCGTCGAACGGCTATCATGATCTCGCGACGCCGTACTTCGAAACGGAG AAGGAGCTCGCGCGGCTGCAGACGGTGTCCGGCCTCGCGCCGAATCTGCAGGTGACGTTCTACCAGGGCGGCCACATGAT CTATCTCGACGACGTCGCGAGGCCGCAGATGCAGGCGGATCTCGTCGCGTTCTACCAGAACCGGCCGGTGGCAAACGCGT TGACGCTCGCGGCGCTGCCGTCGCCGTGGCCCGACGAAAGCCCGGCGAACACGCCGACGGCGAAGATCGCGCGGGCCGCC GCGGCCCGCTGA
Upstream 100 bases:
>100_bases CGCCGAAATTGAATAAATCAATTGAGACTGATCGAGGAAGGTATTGCATTGCAATACCTTACGTCTTTGAAATAAATAGA AAGCGAAAATGAAAAAATCG
Downstream 100 bases:
>100_bases GATTGCGGCGAGCGGGGGCGCGTTAAGCGTGCGCTCCGCTTCGTTGAACCCACGATATTGCGAGTCCAGTCATGTTCAAG ATTCTTCAGTCGCGGCGCGT
Product: serine carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA AAR
Sequences:
>Translated_563_residues MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA AAR >Mature_563_residues MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAGDGLPASQVSERAAVMSHQWT ANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDGSPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNW PNFPLVDNPESLIATTDMVFIDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGAYAQRIENFVTAQYAPIVHYA TASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPSPGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILIS KPFTSALASQMPNYLGYTAPNATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALPSPWPDESPANTPTAKIARAA AAR
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59776; Mature: 59776
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCC DGLPASQVSERAAVMSHQWTANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDG CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEEECCCCCC SPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNWPNFPLVDNPESLIATTDMVF CCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEE IDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT ECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCH DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGA HHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH YAQRIENFVTAQYAPIVHYATASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPS HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHEEECCCCC PGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILISKPFTSALASQMPNYLGYTAP CCCEEEECCEEEECCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCC NATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE CCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALP HHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHEEEEECC SPWPDESPANTPTAKIARAAAAR CCCCCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure MHGGYGGLARPRGRMPATAAVAAALLLALGGCGDDLQSTTTPAQLNQPYTDTTAYSPKAG CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCC DGLPASQVSERAAVMSHQWTANGASVDYLTTTGHLTATDPNGNAEATMSYVAYTAPSRDG CCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEECCCCCCCEEEEEEEEECCCCCC SPRPVTFFYNGGPGSSSVWLRLGSFAPTRVATPDPLMTNWPNFPLVDNPESLIATTDMVF CCCCEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEE IDPPGTGLSEAIQPNTNQTFWGADADVKVMRDFIRRYLSVNGRGGSPIYLYGESYGTPRT ECCCCCCHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCH DMLALALESAGVPLTGIVLQSSILNYMAAAGDQAVGTFPSYAQVAAYFNQVSPSPTNLGA HHHHHHHHHCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHH YAQRIENFVTAQYAPIVHYATASSPISPDAGTLAAWSSQTGMATASIGAYFQYFYDTEPS HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHEEECCCCC PGQTTLVPGYTIGRYDGRVSLPNGDARLASDDDPSDILISKPFTSALASQMPNYLGYTAP CCCEEEECCEEEECCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCHHCCCCCC NATYQTLNPDIIGVWNFSHAGQPYPDTIPDLLAALQLNPKLKVLASNGYHDLATPYFETE CCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHCCCCHHHH KELARLQTVSGLAPNLQVTFYQGGHMIYLDDVARPQMQADLVAFYQNRPVANALTLAALP HHHHHHHHHHCCCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHCCCCCHHHEEEEECC SPWPDESPANTPTAKIARAAAAR CCCCCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA