| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451546
Identifier: 126451546
GI number: 126451546
Start: 421180
End: 421824
Strand: Direct
Name: 126451546
Synonym: BURPS1106A_0456
Alternate gene names: NA
Gene position: 421180-421824 (Clockwise)
Preceding gene: 126454789
Following gene: 126453148
Centisome position: 10.56
GC content: 68.99
Gene sequence:
>645_bases ATGAACGCCCATACCCAGAAATCCCTGATCGCCGGCCCCGTCGGCCACATCGAGATCGCGATCGACCTGCCCGACGCCGT GCGCGAGGGCTCGGCCGCGCCGCGCGGGATCGCGCTCGTCGCGCATCCGCATCCGCTGTTCGGCGGCACGATGGACAACA AGGTCGCGCAGACGCTCGCGCGCATCTTCGTCCAGCTGAATTACGCGGTGATCCGCTCGAATTTTCGCGGCGTCGGCGCG ACCGAGGGCGAGCACGACAACGGCGCCGGCGAAGTCGACGATCTGCTCGCGGTGCTCGCGCACATGCGCGCGCTGCCCGG CCATGCGGACTTGCCGCTCGTGCTCGCCGGCTTCTCGTTCGGCACGTTCGTGCTGTCGCACGTCGGCAAGCGGCTGCGCG ACGCGGGGCAGGCGATCGAGCGGATGGTGTTCGTCGGCACCGCGGCGAGCCGCTGGCAGGTCGCCGCGGTGCCGGAGGAC ACGATCGTGATTCATGGCGAGAACGACGACACGGTGCCGATCGCGTCGGTCTACGACTGGGCGCGGCCGCAGGAACTGCC CGTCATCGTGATTCCGGGCGCCGAGCATTTCCTCCATCGCAAGCTGCACATCCTGAAGCGCATTGTCGTCGGCGCGTGGC GCTGA
Upstream 100 bases:
>100_bases TCGTCGAATCGCATCTGCGCGACGGCCAGGTCGTCGAGCGCCTGAGAATCTGAGCCGTTTTTTTTCGAGTCACCCCGCAC GCTGTCCGCATGAACGCCGC
Downstream 100 bases:
>100_bases CGCGGGCGGCGGGCGCGTCGCCGATGGCGCCCGACGCGCGCGAGGGCGGGGGCGAGGGCGGTGGAAGCGGGAAGCGGGAA GCGGCGATCGCGGCGCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR
Sequences:
>Translated_214_residues MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR >Mature_214_residues MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLARIFVQLNYAVIRSNFRGVGA TEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSFGTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPED TIVIHGENDDTVPIASVYDWARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR
Specific function: Unknown
COG id: COG2945
COG function: function code R; Predicted hydrolase of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000383 [H]
Pfam domain/function: PF02129 Peptidase_S15 [H]
EC number: NA
Molecular weight: Translated: 23047; Mature: 23047
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLA CCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH RIFVQLNYAVIRSNFRGVGATEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCH GTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPEDTIVIHGENDDTVPIASVYDW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCEEHHHHHCC ARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNAHTQKSLIAGPVGHIEIAIDLPDAVREGSAAPRGIALVAHPHPLFGGTMDNKVAQTLA CCCCCCHHHHCCCCCEEEEEEECCHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH RIFVQLNYAVIRSNFRGVGATEGEHDNGAGEVDDLLAVLAHMRALPGHADLPLVLAGFSF HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCH GTFVLSHVGKRLRDAGQAIERMVFVGTAASRWQVAAVPEDTIVIHGENDDTVPIASVYDW HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCEEHHHHHCC ARPQELPVIVIPGAEHFLHRKLHILKRIVVGAWR CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]