| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451525
Identifier: 126451525
GI number: 126451525
Start: 3088221
End: 3089681
Strand: Direct
Name: 126451525
Synonym: BURPS1106A_3173
Alternate gene names: NA
Gene position: 3088221-3089681 (Clockwise)
Preceding gene: 126454982
Following gene: 126452632
Centisome position: 77.43
GC content: 63.86
Gene sequence:
>1461_bases TTGCACGACGGTCCGTTTCCGCGCCGCGGCGCCGATCGGCGCCCGCCGCAAGGCTTGCCGGCGAGCGGCGAGACCACCGG TTTCGCCGCGGCTCGTCGATTCGTTTTGCTAACTTTTTTTCAGCGAGGTGATACGCCCGGAAACCGTTTCGACGACAACG CACCGCTTCGACGGCGCCTTGCTTGCTCGCGTCGCCAGACAACACCAAGACTTCTCAGGGAATCCTTCATGTTCTTACGC TCTCTCGTGGCGCTCGCCGCCGCGGCCGCTTCGATGTTCGGCGCGGGCCCCGCACATGCGACCGGCGTCGGCGCACCGCT CCAGATCGACGTCTACAACCCCGGCGAAAAAAGCCTCTTTCCCGTCTCGTCCGAAATCGTCACGGGCAAGACCGGCACGA TCCTCATCGACGCCCAGTTCCAGCGCAACGACGCCGAGGCGCTCGTCAACAAGATCAAGGCGACCGGCAAGCCGCTCAAG CTCGTCTATGTGAGCCACAGCGATCCGGACTATTACTTCGGCCTCGACACGATCAAGGCGGCGTTCCCCGACGCGAAGAT CGTCGCGACGCCGCAGACGGTTGCCGCGATCAAGGCGAACAAGGACGACAAGCTCGCGTACTGGGGGCCGATCCTGAAGG ACAATGCGCCGCGCACGCTCGTCGTGCCGCAGCCGCTCCACGGCGACAGGCTCACGCTCGACGGCCATGAATTGCGCATC GTCGGCCTCGACGGCCCGTCGCCCGATCGCACGTTCGTATCGATCCCGTCCGCGCGCGCGGTCGTCGGCGGCATTCCGGT GGCGGCGAACATCCACGTGTGGATCGCCGATACGCAAACGCCGGAGTCGCGCCGCAACTGGATCAAGACGCTCGACCGGA TCGCGGCGCTGCACCCGTCGCGCGTCGTGCCCGGCCACTACCTCGCGAACCCGGACGGCAGCGAGCCGTACACGCTCGCA TCCGTGAAGTTCACGCGCGACTATCTGGTCGCGTTCGACGCGGAAGCCGCGAAAGCGAGAAATTCCGGAGAACTGATCAC TGCAATGAAGGCGCGCTATCCGAATCTCGCGGATGCATCGTCGCTGGAAATGAGCGCGAAGGTCATCAAGGGCGAGATGC AATGGCCCGTCGTCGGCACGGCCTCCGCGTTTCCGGCAGCAGGCAAGAAGGCGCTCGTGCAGTTCGGCGATGTCGGCTTT CGCCTCGACTTCAAGGACGACCACACGATGACGTTCGTCGGCACAGCCGGCCAGTACCAGGGCGCGACCGATACCGTCGA ATACAAGGCAACGCAGATCCGGCCGCAGGTGTTCATGGTCTATTGGCACGAACCGAAGAGCGGCGACAACGTGGTGCACG TCGAAGACTTCGAGAACGGCATCGTCTATACGAACATCGCGCATCGCAACGGCGAGTTCCAGCATCTGAAGGGAACGATT CGCATCGAAGACGCGAAGTAA
Upstream 100 bases:
>100_bases GTCGGTAATCTGCTCACCCTCGGGTGCGTTCTTTCGCATCGTCGTCATCCCGTCTATAGTTTCTTCCGGTAACTACCTGT GGCGTAGATACTAGCACCGT
Downstream 100 bases:
>100_bases GCCGGCACGCCCGTGGCCGCGCCGCTGTCGGCGGCGCGACTATTCGTCCGGCAGGGCGCGCCGGCGCACTCGGGGCGCGC CCCTCCCCGTTCGGGCCGCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like; Zn-Dependent Hydrolase Including Glyoxylase; Metallo-Beta-Lactamase; Beta-Lactamase Class B; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Protein; Signal Peptide; Beta-Lactamase-Like Protein; Hypothethical Protein; Beta-Lactamase; Exported Metallo-Beta-Lactamase Superfamily Protein; Hydrolase
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MHDGPFPRRGADRRPPQGLPASGETTGFAAARRFVLLTFFQRGDTPGNRFDDNAPLRRRLACSRRQTTPRLLRESFMFLR SLVALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAEALVNKIKATGKPLK LVYVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRI VGLDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLA SVKFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDVGF RLDFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTI RIEDAK
Sequences:
>Translated_486_residues MHDGPFPRRGADRRPPQGLPASGETTGFAAARRFVLLTFFQRGDTPGNRFDDNAPLRRRLACSRRQTTPRLLRESFMFLR SLVALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAEALVNKIKATGKPLK LVYVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRI VGLDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLA SVKFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDVGF RLDFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTI RIEDAK >Mature_486_residues MHDGPFPRRGADRRPPQGLPASGETTGFAAARRFVLLTFFQRGDTPGNRFDDNAPLRRRLACSRRQTTPRLLRESFMFLR SLVALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLFPVSSEIVTGKTGTILIDAQFQRNDAEALVNKIKATGKPLK LVYVSHSDPDYYFGLDTIKAAFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRI VGLDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPSRVVPGHYLANPDGSEPYTLA SVKFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADASSLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDVGF RLDFKDDHTMTFVGTAGQYQGATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTI RIEDAK
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53042; Mature: 53042
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDGPFPRRGADRRPPQGLPASGETTGFAAARRFVLLTFFQRGDTPGNRFDDNAPLRRRL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHCCCCCCCCCCCCCHHHHHH ACSRRQTTPRLLRESFMFLRSLVALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC PVSSEIVTGKTGTILIDAQFQRNDAEALVNKIKATGKPLKLVYVSHSDPDYYFGLDTIKA CCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHHHHH AFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRI CCCCCEEEECCCEEEEEECCCCCCEEEECCHHCCCCCCEEEECCCCCCCEEEECCCEEEE VGLDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPS EECCCCCCCCEEEECCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCC RVVPGHYLANPDGSEPYTLASVKFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADAS CCCCCCEECCCCCCCCEEEEEEEEECEEEEEECCHHHHCCCCCCEEEEHHHCCCCCCCCC SLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDVGFRLDFKDDHTMTFVGTAGQYQ CHHHEEHEEECCCCCCEEECCCCCCCCCHHHHEEECCCEEEEECCCCCEEEEEECCCCCC GATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTI CCCCEEEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEE RIEDAK EEECCC >Mature Secondary Structure MHDGPFPRRGADRRPPQGLPASGETTGFAAARRFVLLTFFQRGDTPGNRFDDNAPLRRRL CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEHHHCCCCCCCCCCCCCHHHHHH ACSRRQTTPRLLRESFMFLRSLVALAAAAASMFGAGPAHATGVGAPLQIDVYNPGEKSLF HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC PVSSEIVTGKTGTILIDAQFQRNDAEALVNKIKATGKPLKLVYVSHSDPDYYFGLDTIKA CCCCCEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCCEEEEEEECCCCCEEECHHHHHH AFPDAKIVATPQTVAAIKANKDDKLAYWGPILKDNAPRTLVVPQPLHGDRLTLDGHELRI CCCCCEEEECCCEEEEEECCCCCCEEEECCHHCCCCCCEEEECCCCCCCEEEECCCEEEE VGLDGPSPDRTFVSIPSARAVVGGIPVAANIHVWIADTQTPESRRNWIKTLDRIAALHPS EECCCCCCCCEEEECCCCCCEECCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCC RVVPGHYLANPDGSEPYTLASVKFTRDYLVAFDAEAAKARNSGELITAMKARYPNLADAS CCCCCCEECCCCCCCCEEEEEEEEECEEEEEECCHHHHCCCCCCEEEEHHHCCCCCCCCC SLEMSAKVIKGEMQWPVVGTASAFPAAGKKALVQFGDVGFRLDFKDDHTMTFVGTAGQYQ CHHHEEHEEECCCCCCEEECCCCCCCCCHHHHEEECCCEEEEECCCCCEEEEEECCCCCC GATDTVEYKATQIRPQVFMVYWHEPKSGDNVVHVEDFENGIVYTNIAHRNGEFQHLKGTI CCCCEEEEEEEEECCEEEEEEEECCCCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEE RIEDAK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA