| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445575
Identifier: 126445575
GI number: 126445575
Start: 2532310
End: 2532849
Strand: Reverse
Name: 126445575
Synonym: BURPS668_A2633
Alternate gene names: NA
Gene position: 2532849-2532310 (Counterclockwise)
Preceding gene: 126445170
Following gene: 126442967
Centisome position: 80.99
GC content: 72.22
Gene sequence:
>540_bases ATGGTCCAGATCGTGGTGATCGCCGGCGCGGCGGCGCTCGCGTTCGCGCTGCCGCTGATGCTGTATGCGGCATCGCGCCC GGGAACGCGTCGCGTCGAGCACCGCGCGCGGATCGAGGCGGGCGCCGCGCGCATCTTTCCGGCCCCGGCGGACCTGCGCC GCTTCGACGCGTGCAATCCGTGCGAACGCAAGGCCCCGGCGCTGCGCGGCGCGTACGGCGCGGTGAGGTCCGGCGTCGGC GCGAGCGATGCATGGACGCGCGAGAAGGCCGGCGTGGGGCGCTTCGGGACCACCGGGCTCGGCGAGCCGTCGCACGTGAG GACACGGCTCGACTTCGTGAGGCGGTTCGACGCGCACGACGTCGCCGAATTCACGCTGCGCCCGGACGGCGACGCGACGG TCGTCACGTGGGCGATGCGCGGGCCGTCGCCGTTTCTGTCGAAGCTGATGCGGGCGTGCTTGAGCATCGGCAAGATGGTC GGCAAGGACTTTTATACGCGGCTCGCGAACCCCAAGGCGCTCGCCGAAGGGCGCGCATGA
Upstream 100 bases:
>100_bases GCAACTGTTCGAGCTCGACGATTTCGAGTCGGGCGACGGTGTCGACCGGTTCCGCGAGCTCGAGAGCAAGCTCGGCTGAC GCGAGCGACAGGAGACGGCA
Downstream 100 bases:
>100_bases TGGACGCCGCCGTTTACCGTGCGATCGATGCCGTCTGGCGGATCGAGGCCGCGAGAATCATCGCGCACGTCGCGCGGCTC GTGCGCGACGTCGGCGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: DoxX Family Domain-Containing Protein; DoxX Family Protein; Polyketide Cyclase / Dehydrase And Lipid Transport
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MVQIVVIAGAAALAFALPLMLYAASRPGTRRVEHRARIEAGAARIFPAPADLRRFDACNPCERKAPALRGAYGAVRSGVG ASDAWTREKAGVGRFGTTGLGEPSHVRTRLDFVRRFDAHDVAEFTLRPDGDATVVTWAMRGPSPFLSKLMRACLSIGKMV GKDFYTRLANPKALAEGRA
Sequences:
>Translated_179_residues MVQIVVIAGAAALAFALPLMLYAASRPGTRRVEHRARIEAGAARIFPAPADLRRFDACNPCERKAPALRGAYGAVRSGVG ASDAWTREKAGVGRFGTTGLGEPSHVRTRLDFVRRFDAHDVAEFTLRPDGDATVVTWAMRGPSPFLSKLMRACLSIGKMV GKDFYTRLANPKALAEGRA >Mature_179_residues MVQIVVIAGAAALAFALPLMLYAASRPGTRRVEHRARIEAGAARIFPAPADLRRFDACNPCERKAPALRGAYGAVRSGVG ASDAWTREKAGVGRFGTTGLGEPSHVRTRLDFVRRFDAHDVAEFTLRPDGDATVVTWAMRGPSPFLSKLMRACLSIGKMV GKDFYTRLANPKALAEGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19283; Mature: 19283
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQIVVIAGAAALAFALPLMLYAASRPGTRRVEHRARIEAGAARIFPAPADLRRFDACNP CEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCC CERKAPALRGAYGAVRSGVGASDAWTREKAGVGRFGTTGLGEPSHVRTRLDFVRRFDAHD HHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC VAEFTLRPDGDATVVTWAMRGPSPFLSKLMRACLSIGKMVGKDFYTRLANPKALAEGRA HHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC >Mature Secondary Structure MVQIVVIAGAAALAFALPLMLYAASRPGTRRVEHRARIEAGAARIFPAPADLRRFDACNP CEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHCCCCCHHHHHCCCCCC CERKAPALRGAYGAVRSGVGASDAWTREKAGVGRFGTTGLGEPSHVRTRLDFVRRFDAHD HHHCCCHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC VAEFTLRPDGDATVVTWAMRGPSPFLSKLMRACLSIGKMVGKDFYTRLANPKALAEGRA HHHEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA