| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is 126445498
Identifier: 126445498
GI number: 126445498
Start: 1332617
End: 1333360
Strand: Reverse
Name: 126445498
Synonym: BURPS668_A1422
Alternate gene names: NA
Gene position: 1333360-1332617 (Counterclockwise)
Preceding gene: 126444194
Following gene: 126443129
Centisome position: 42.63
GC content: 68.68
Gene sequence:
>744_bases ATGAAAAGAATGCTTCCGCTCGCGGCCGCGAGCGCGCTCTTCGCGCCCGCCGGCGCGCACGCCGACCATCCGTTCACGTC CGACGACACGAACACGCAAGGCGACGGCAACTGGCAGTACGAGCTGAACGTCGAGCGCACGTCGAAGCAGCCCGACATCG GCCGCCAGCAGCTCTGGAACACGACGCTCACGCGCGGCTTCGGCGAACGCGTCGACCTGTACGTGCAGGCGCCGTACACG CACGTGCAGACGCGCTCCGACGAAGACGGCTCGGGCCTCGGCGACCTCGAGATCGGCGCGAAGTGGCGCGTGCTCGAACG CGGGCCGCTCAGCATCGCGCTGAAGCCGCGCTTCACGATGCCGACGGGCGACGATGCGCGCGGACTCGGCAACGGGCGCG CGAGCGCGGGCGCGATGCTGCTCGCGCAGTACGACGTCGCGCGCCTGCAGGTACTCGTGAACGCGGGCCTGATGTATCAG CCGAACCGGCAAGGCAATCTCGCATCGATCTGGCAGGCGTGCGGCGCAATCGTCTATCGTGCGACGGACAAGCTGCGGCT CGGCGTCGATATCGGCGTTTCACGCAATCCGGAGCGCGGCGCCGGCGCGCATCCGGCGTACGTGATCGCGGGCGCGATCT ATACGCCGCGCGACTGGCTCGACGTCGACCTCGGCTATCGGCGCGGGCTCAACGATCAGATCTACGACCATGCGTTGATG GCGGGGCTCACGGTGCGGTGGTGA
Upstream 100 bases:
>100_bases GCGCCGCTACAAGCGATGGTTCTGACGCGAAGCGTTTCGCTCCCGCATCCCGGCCGGCGCGCGGCGCGCGCCGGCCGCCC GTCTCATCGAAGGTGACGCC
Downstream 100 bases:
>100_bases ACGCCTCGGCCGCGGGGCAACGGCGGCGCGGCCGCGCCGCGGCCCGCAAGCCGCGGATCGGCGGCCCGCGCAATGGCGCG GCGCCGCGCGCCCGGCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKRMLPLAAASALFAPAGAHADHPFTSDDTNTQGDGNWQYELNVERTSKQPDIGRQQLWNTTLTRGFGERVDLYVQAPYT HVQTRSDEDGSGLGDLEIGAKWRVLERGPLSIALKPRFTMPTGDDARGLGNGRASAGAMLLAQYDVARLQVLVNAGLMYQ PNRQGNLASIWQACGAIVYRATDKLRLGVDIGVSRNPERGAGAHPAYVIAGAIYTPRDWLDVDLGYRRGLNDQIYDHALM AGLTVRW
Sequences:
>Translated_247_residues MKRMLPLAAASALFAPAGAHADHPFTSDDTNTQGDGNWQYELNVERTSKQPDIGRQQLWNTTLTRGFGERVDLYVQAPYT HVQTRSDEDGSGLGDLEIGAKWRVLERGPLSIALKPRFTMPTGDDARGLGNGRASAGAMLLAQYDVARLQVLVNAGLMYQ PNRQGNLASIWQACGAIVYRATDKLRLGVDIGVSRNPERGAGAHPAYVIAGAIYTPRDWLDVDLGYRRGLNDQIYDHALM AGLTVRW >Mature_247_residues MKRMLPLAAASALFAPAGAHADHPFTSDDTNTQGDGNWQYELNVERTSKQPDIGRQQLWNTTLTRGFGERVDLYVQAPYT HVQTRSDEDGSGLGDLEIGAKWRVLERGPLSIALKPRFTMPTGDDARGLGNGRASAGAMLLAQYDVARLQVLVNAGLMYQ PNRQGNLASIWQACGAIVYRATDKLRLGVDIGVSRNPERGAGAHPAYVIAGAIYTPRDWLDVDLGYRRGLNDQIYDHALM AGLTVRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27065; Mature: 27065
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMLPLAAASALFAPAGAHADHPFTSDDTNTQGDGNWQYELNVERTSKQPDIGRQQLWN CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH TTLTRGFGERVDLYVQAPYTHVQTRSDEDGSGLGDLEIGAKWRVLERGPLSIALKPRFTM HHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEECCEEEEEECCCEEEEECCCCCC PTGDDARGLGNGRASAGAMLLAQYDVARLQVLVNAGLMYQPNRQGNLASIWQACGAIVYR CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHEEEE ATDKLRLGVDIGVSRNPERGAGAHPAYVIAGAIYTPRDWLDVDLGYRRGLNDQIYDHALM CCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHH AGLTVRW HCEEECC >Mature Secondary Structure MKRMLPLAAASALFAPAGAHADHPFTSDDTNTQGDGNWQYELNVERTSKQPDIGRQQLWN CCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHH TTLTRGFGERVDLYVQAPYTHVQTRSDEDGSGLGDLEIGAKWRVLERGPLSIALKPRFTM HHHHCCCCCEEEEEEECCCEEEECCCCCCCCCCCCEEECCEEEEEECCCEEEEECCCCCC PTGDDARGLGNGRASAGAMLLAQYDVARLQVLVNAGLMYQPNRQGNLASIWQACGAIVYR CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHEEEE ATDKLRLGVDIGVSRNPERGAGAHPAYVIAGAIYTPRDWLDVDLGYRRGLNDQIYDHALM CCCCEEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEECCHHHCCCCHHHHHHHHH AGLTVRW HCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA