| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445453
Identifier: 126445453
GI number: 126445453
Start: 1484633
End: 1486069
Strand: Reverse
Name: 126445453
Synonym: BURPS668_A1548
Alternate gene names: NA
Gene position: 1486069-1484633 (Counterclockwise)
Preceding gene: 126444716
Following gene: 126442547
Centisome position: 47.52
GC content: 72.93
Gene sequence:
>1437_bases ATGGACGAGGCGCGCCCGGATCGGGCCCGAACGACGGGGCGCCCGGCCGCGCCCGCCGCCGCGATCGCATCCGCCGCGCG TGTCGGACGGCGCTCGCCCGGCGCCGCGCCGGAGGGAACCGGCCGGCGGCTCGGCGGCATCGCCGATGCGGGCGGCTCGC GCGGGGCCGCTTCGCGCAGGGATGCCGATGCGCGCGGACGCTACGTCGTGCGCCGTGCCGGCGCGCCGCGCGCCGGGGGC CGCACCGAACAGTTTGATGGGGATGGGAGGCGCGCGCGCCCGAGCGGCGCGCGCGGCGATGCGATGAACGAAACCGATGA CGCGCCGCTTCACGCCCGCGTGCGCCTGTTCCTCTGCGGCGATGTGATGACGGGCCGCGGGATCGACCAGATCCTGCCGC ATCCGGGCGCCCCCCGGCTATACGAGCGCTATTGCCGTTCGGCGCGCGACTACGTGCGGCTTGCCGAGCGCGCGAACGGC GAATTGCCCGCGCGCGTCGACTGCGCGTACCCGTGGGGCGACGCGCTCGCGGAACTCGACCGCGTGCGGCCGCACGTGCG GATCGTCAACCTGGAAACCGCGATCACGACGAGCGATGCGCGCTGGCCCGACAAGGCCGTCCTGTATCGGATGCATCCGC GCAACGTCGGCTGCGTGTCGAGCGCGCGGATCGATTGCTGCGTGCTCGCGAACAATCATTCGCTCGACTGGGGGCGCGAG GGCCTCGCCGATACGCTCGACACGCTGCGGCGGGCCGGCATCCGTACCGCCGGCGCGGGCGACGACGACGCGCATGCGGC GCGGCCCGCCACGCTCGGCGTCGCGCCCGGGCGCCGCGTGCTCGTGTATGCATACGCGGCCGAAACGAGCGGCGTGCCGC CGTCATGGGCGGCGACGCCGCGGCGCGGCGGCCTCAACTACCTGGCGGATCTGTCGTCCGGGCGGGCGACGCAGATCGGC GAGCGGATCGCCGCGCAGCGCCGCGAGGGCGATCTCGTCGTCGTGTCGCTCCATTGGGGCGGCAACTGGGGATTCGAGAT CGGCGACGACGAGCACGCATTCGCGCACCGGCTGATCGACACCGGCGCGGCCGACATCGTCTACGGCCATTCATCGCATC ACGTCAAGGGCATCGAGATCTACCGGGAGCGGCTGATCCTGTACGGTTGCGGCGATTGCCTGAACGACTACGAGGGCATC CACGGCCACCAGCCGTTCCGGCCGGATCTCGCGCTGATGTACTTTCCGGTGCTCGATGCCGGCAGCGGCGCGCTCGTCGA GCTGTCGGCGGTGCCGATGCAGATCCGGAACCTGCGGCTGCAACGCGCGCCCGCCGACGGCAAAGCGTGGCTGCACGCGG TGCTGGAGCGCGAGAGCCGGCGTTTCGGCACGCACGTGTCGGCGTGCGATGTCGACGGGCTGCATGTGCACTGGTGA
Upstream 100 bases:
>100_bases CGCGAGGTATCGATACGCCACGGCTTTCGTCGACGGGAAAACGGATCGCGATCATCGCCGGCCTTCGCGATGCGCGCGGC GCACGCCTGAATGACGATCG
Downstream 100 bases:
>100_bases CGCGGGGGCGGGCGTCGGCCGCTCCGCACGATCCGGCGCGAAGGCGCATCGCGCGCCGCGCCGCGCGATGCGCGTTCTTC ACGCACCGGGACTGGCGTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 478; Mature: 478
Protein sequence:
>478_residues MDEARPDRARTTGRPAAPAAAIASAARVGRRSPGAAPEGTGRRLGGIADAGGSRGAASRRDADARGRYVVRRAGAPRAGG RTEQFDGDGRRARPSGARGDAMNETDDAPLHARVRLFLCGDVMTGRGIDQILPHPGAPRLYERYCRSARDYVRLAERANG ELPARVDCAYPWGDALAELDRVRPHVRIVNLETAITTSDARWPDKAVLYRMHPRNVGCVSSARIDCCVLANNHSLDWGRE GLADTLDTLRRAGIRTAGAGDDDAHAARPATLGVAPGRRVLVYAYAAETSGVPPSWAATPRRGGLNYLADLSSGRATQIG ERIAAQRREGDLVVVSLHWGGNWGFEIGDDEHAFAHRLIDTGAADIVYGHSSHHVKGIEIYRERLILYGCGDCLNDYEGI HGHQPFRPDLALMYFPVLDAGSGALVELSAVPMQIRNLRLQRAPADGKAWLHAVLERESRRFGTHVSACDVDGLHVHW
Sequences:
>Translated_478_residues MDEARPDRARTTGRPAAPAAAIASAARVGRRSPGAAPEGTGRRLGGIADAGGSRGAASRRDADARGRYVVRRAGAPRAGG RTEQFDGDGRRARPSGARGDAMNETDDAPLHARVRLFLCGDVMTGRGIDQILPHPGAPRLYERYCRSARDYVRLAERANG ELPARVDCAYPWGDALAELDRVRPHVRIVNLETAITTSDARWPDKAVLYRMHPRNVGCVSSARIDCCVLANNHSLDWGRE GLADTLDTLRRAGIRTAGAGDDDAHAARPATLGVAPGRRVLVYAYAAETSGVPPSWAATPRRGGLNYLADLSSGRATQIG ERIAAQRREGDLVVVSLHWGGNWGFEIGDDEHAFAHRLIDTGAADIVYGHSSHHVKGIEIYRERLILYGCGDCLNDYEGI HGHQPFRPDLALMYFPVLDAGSGALVELSAVPMQIRNLRLQRAPADGKAWLHAVLERESRRFGTHVSACDVDGLHVHW >Mature_478_residues MDEARPDRARTTGRPAAPAAAIASAARVGRRSPGAAPEGTGRRLGGIADAGGSRGAASRRDADARGRYVVRRAGAPRAGG RTEQFDGDGRRARPSGARGDAMNETDDAPLHARVRLFLCGDVMTGRGIDQILPHPGAPRLYERYCRSARDYVRLAERANG ELPARVDCAYPWGDALAELDRVRPHVRIVNLETAITTSDARWPDKAVLYRMHPRNVGCVSSARIDCCVLANNHSLDWGRE GLADTLDTLRRAGIRTAGAGDDDAHAARPATLGVAPGRRVLVYAYAAETSGVPPSWAATPRRGGLNYLADLSSGRATQIG ERIAAQRREGDLVVVSLHWGGNWGFEIGDDEHAFAHRLIDTGAADIVYGHSSHHVKGIEIYRERLILYGCGDCLNDYEGI HGHQPFRPDLALMYFPVLDAGSGALVELSAVPMQIRNLRLQRAPADGKAWLHAVLERESRRFGTHVSACDVDGLHVHW
Specific function: Could be involved in the biosynthesis of a cell wall component (Potential) [H]
COG id: COG2843
COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CapA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019079 [H]
Pfam domain/function: PF09587 PGA_cap [H]
EC number: NA
Molecular weight: Translated: 51739; Mature: 51739
Theoretical pI: Translated: 8.62; Mature: 8.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEARPDRARTTGRPAAPAAAIASAARVGRRSPGAAPEGTGRRLGGIADAGGSRGAASRR CCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DADARGRYVVRRAGAPRAGGRTEQFDGDGRRARPSGARGDAMNETDDAPLHARVRLFLCG CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC DVMTGRGIDQILPHPGAPRLYERYCRSARDYVRLAERANGELPARVDCAYPWGDALAELD CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH RVRPHVRIVNLETAITTSDARWPDKAVLYRMHPRNVGCVSSARIDCCVLANNHSLDWGRE HCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHH GLADTLDTLRRAGIRTAGAGDDDAHAARPATLGVAPGRRVLVYAYAAETSGVPPSWAATP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCC RRGGLNYLADLSSGRATQIGERIAAQRREGDLVVVSLHWGGNWGFEIGDDEHAFAHRLID CCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH TGAADIVYGHSSHHVKGIEIYRERLILYGCGDCLNDYEGIHGHQPFRPDLALMYFPVLDA CCCCEEEECCCCCCCHHHHHHHHHEEEEECCHHHHHCCCCCCCCCCCCCEEEEEEEEEEC GSGALVELSAVPMQIRNLRLQRAPADGKAWLHAVLERESRRFGTHVSACDVDGLHVHW CCCCEEEEECCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCEEECC >Mature Secondary Structure MDEARPDRARTTGRPAAPAAAIASAARVGRRSPGAAPEGTGRRLGGIADAGGSRGAASRR CCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DADARGRYVVRRAGAPRAGGRTEQFDGDGRRARPSGARGDAMNETDDAPLHARVRLFLCG CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEC DVMTGRGIDQILPHPGAPRLYERYCRSARDYVRLAERANGELPARVDCAYPWGDALAELD CCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHH RVRPHVRIVNLETAITTSDARWPDKAVLYRMHPRNVGCVSSARIDCCVLANNHSLDWGRE HCCCCEEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCHH GLADTLDTLRRAGIRTAGAGDDDAHAARPATLGVAPGRRVLVYAYAAETSGVPPSWAATP HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCC RRGGLNYLADLSSGRATQIGERIAAQRREGDLVVVSLHWGGNWGFEIGDDEHAFAHRLID CCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHH TGAADIVYGHSSHHVKGIEIYRERLILYGCGDCLNDYEGIHGHQPFRPDLALMYFPVLDA CCCCEEEECCCCCCCHHHHHHHHHEEEEECCHHHHHCCCCCCCCCCCCCEEEEEEEEEEC GSGALVELSAVPMQIRNLRLQRAPADGKAWLHAVLERESRRFGTHVSACDVDGLHVHW CCCCEEEEECCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]