| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445449
Identifier: 126445449
GI number: 126445449
Start: 298143
End: 299642
Strand: Reverse
Name: 126445449
Synonym: BURPS668_A0333
Alternate gene names: NA
Gene position: 299642-298143 (Counterclockwise)
Preceding gene: 126442861
Following gene: 126444160
Centisome position: 9.58
GC content: 64.47
Gene sequence:
>1500_bases ATGAAGAAACAGCAAGTCCAGACGGCCGCCGCCGGCGTCCAGCCGCAAGCAGATTCGGATTTCGCGCAGTTGCTCGCGCA GGAGTTCAAGCCGAAGACGGAGCAGGCGCGCGAAGCGGTCGAATACGCGGTGCGCACGCTCGCCGAGCAGGCGCTCGCGC AATCGGCGACGATCAGCGACGATGCATACAAGAGCATCGCCGCGATCATCGCGCAGATCGACCATAAGCTATCCGAACAG ATCAACCTGATCCTCCATCACGCGGATTTCCAGAAGCTCGAATCGGCGTGGCGCGGACTGCATCACCTGGTGTCGAACAC CGAGACCGACGAGCGCCTGAAGATCCGCTTCATGGACATCTCGAAGGAAGAGCTGCGCCGCACGATGCGGCGCTACAAGG GGCAATCGTGGGACCAGAGCCCGCTCTTCAAGCAGATCTACGAGGAGGAGTACGGGCAGCTCGGCGGCGAGCCGTACGGC TGCCTCGTCGCCGATTACTACTTCGACCACACGCCGCCCGACGTCGACCTGCTCGGCTCGATCTCGAAGGTGGCCGCGTC CGCGCACACGCCGTTCATCTCCGGCGCCTCGCCTTCGGTGCTGCAGATGGAATCGTGGCAGGAGCTCGCGAACCCGCGCG ACCTGACGAAGATCTTCACGCAAAACCTTGAATACGCGTCATGGAACGCGCTGCGCAATATGGACGACGCGCGCTACATC GGCCTCGCGATGCCGCGCTTCCTGTCGCGCCTGCCGTACGGCGTGCTGACGAATCCCGTCGACGAGTTCGACTTCGAGGA AGACACGAACGGTGCCGACCATCGCCGCTACGCGTGGACGAACGCCGCCTACGCGATGGGCGTGAACATCAACCGGTCGT TCCGGCTCTACGGCTGGTGCTCGCTCATTCGCGGCGTCGAATCGGGCGGCACGGTCGAGAACCTGCCGTGCCATACGTTC CCGACCGACGACGGCGGCATCGACATCAAATGCCCAACCGAGATCGCGATCTCGGACCGGCGCGAGGCGGAGCTGTCGAA GAACGGCTTCATTCCGCTCGTGCACCGCAAGAACACCGATCACGCGACGTTCATCGGCGCGCAATCGCTGCACAAGCCGG CCGAATACGACGATTCCGACGCGACGGCCAACGCGAACCTGTCGGCGCGCCTGCCGTATCTGTTCGCATGCTCGCGCTTC GCGCACTACCTGAAGTGCATCGTGCGCGACAAGGTGGGCGCCTTCAAGGAGCGCGAGGACATGCAGCGCTGGCTGAACGA ATGGATCATGAACTACGTCGACGCGGACCCGGCGAACTCGTCGCAGGACACGAAGGCGCGCCGGCCGCTCGCGGCCGCCG AGGTGGTCGTCGAGCAGGCGCAGGGCAACCCCGGCTACTACCAGGCGAAGTTCTTCCTGCGGCCGCATTTCCAGCTCGAG GGCCTGACCGTGTCGCTGCGGCTCGTCGCGAAGCTGCCGTCGATCAAGGAAGCCGCCTGA
Upstream 100 bases:
>100_bases GCGGGCAATGCGCGCGGCGCGAAGGACGCGCCCGACACGGCGAACCACGACAGCGATGCGGCCTGAGCGGCCGCCCTACA CCATACCGGGGAAACGCACC
Downstream 100 bases:
>100_bases CGCATCGCCGGGCGGGCGTCCCCGGTCGGCCGGCTTCGCGCCTTCGCCCACGCGCGCGACGCCGCGCGGGGCCGGCTGTT TTGTCATCCACGCAATCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MKKQQVQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFISGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA
Sequences:
>Translated_499_residues MKKQQVQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFISGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA >Mature_499_residues MKKQQVQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISDDAYKSIAAIIAQIDHKLSEQ INLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDISKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYG CLVADYYFDHTPPDVDLLGSISKVAASAHTPFISGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWCSLIRGVESGGTVENLPCHTF PTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTDHATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRF AHYLKCIVRDKVGAFKEREDMQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE GLTVSLRLVAKLPSIKEAA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56341; Mature: 56341
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQQVQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISD CCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DAYKSIAAIIAQIDHKLSEQINLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYGCLVADYYFDHTPPDVDLLGS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH ISKVAASAHTPFISGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI HHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWC HHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHH SLIRGVESGGTVENLPCHTFPTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTD HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCC HATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRFAHYLKCIVRDKVGAFKERED CCEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE HHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVAKLPSIKEAA CEEEEEHHHHHCCCHHCCC >Mature Secondary Structure MKKQQVQTAAAGVQPQADSDFAQLLAQEFKPKTEQAREAVEYAVRTLAEQALAQSATISD CCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DAYKSIAAIIAQIDHKLSEQINLILHHADFQKLESAWRGLHHLVSNTETDERLKIRFMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC SKEELRRTMRRYKGQSWDQSPLFKQIYEEEYGQLGGEPYGCLVADYYFDHTPPDVDLLGS CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHH ISKVAASAHTPFISGASPSVLQMESWQELANPRDLTKIFTQNLEYASWNALRNMDDARYI HHHHHHHHCCCCCCCCCCCCEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCHHHH GLAMPRFLSRLPYGVLTNPVDEFDFEEDTNGADHRRYAWTNAAYAMGVNINRSFRLYGWC HHHHHHHHHHCCCCHHCCCHHHCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEHHHHH SLIRGVESGGTVENLPCHTFPTDDGGIDIKCPTEIAISDRREAELSKNGFIPLVHRKNTD HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEEECCCCC HATFIGAQSLHKPAEYDDSDATANANLSARLPYLFACSRFAHYLKCIVRDKVGAFKERED CCEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MQRWLNEWIMNYVDADPANSSQDTKARRPLAAAEVVVEQAQGNPGYYQAKFFLRPHFQLE HHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCEEEEEEEECCCEEEC GLTVSLRLVAKLPSIKEAA CEEEEEHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA