| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445298
Identifier: 126445298
GI number: 126445298
Start: 121645
End: 123225
Strand: Reverse
Name: 126445298
Synonym: BURPS668_A0141
Alternate gene names: NA
Gene position: 123225-121645 (Counterclockwise)
Preceding gene: 126444552
Following gene: 126444136
Centisome position: 3.94
GC content: 63.69
Gene sequence:
>1581_bases ATGCGCAACGCTTCAGATCATCGCGCGACGTCAAGGCCTTGTGTCCGGCTGATCGTTCCGGCGCCGACATTTGCCGCCGC GATACACCCACGGTTTGTCCCACCGCTGAGAATTTCGATATCCATGCCGATACGTCAAACGCACATCTGGATTTTCGGCT TCATGATTGCTTGCGTGCTCGCGATGTCTGGTCCGCTCACGTATACGTTCGAGAATACGTTCCGGCAGACTGTCGACATC GATAGGAAAAAGCAGGGCACCGTTGCGGAAGCCACGGCATTCGACGCCCGATCGGCCGAGCAGCCGAGCGCGCCCGATGC CGACCGGATGCATGAACTTCCCCGCATCGATGCCGCTCGATCTCCCACGGATCATTTCGATGAACTGCCCATACATCTCG CCGCCTTTGGCGGCGGCGAGCCGTCGCCGAGCGGCCCGCTTCCTCCCGGCCCCCTCCCCGATACCAGTTTCGCCCCTTTT CCATTTCAGCATGGCTTCGACACGGCAATTCACGCCGGTCCGCCGATACCCGCACCGCCCGAATCGACACTAGCGCGTAC CGATGCGCCCCCCCGCGACGAGACGCCGTTCGAGCCGGATATGCCGCAGCCGAGCGAAACCGTCGACACGCAGCTCTCCT TCTACGCCGACATGGTCGCGCAAGCCATCGAACGCACCGCATATGATTCGATCGCGCTCGCGAAACTCGACAGTGACACC ACGGCGCCCCCGGATACGACGCCGGAACGGCATGACGCCCTCGCCAACGTGAACGCGCCGATGTTCTATGCCGACATGTT GACTGCGTCGATACACGTGCCGCCCTCCAACGATCGCACGCTGTCTGTACCGTCTCTATTGACACACCAGGCGATCGGCA TCGCGTGGACTGAACTGTTCGCCCGCGAACTCCCCGCGACGGCAACGCAGGCTGCGCCGACACGACACGCCGTATCGTTT GCTGCAACGCTGCAAGCGGAGCCGTTCGACCTGGCGCAGTGGAGCGAACCGGACGAAGCCCATTCCGATGGACCTCCACT CGAGCTGGACGGGCAACGCACCGTCGCTCCACCATACCCGCCCGCCGACACGTTGCCGCCCGGCACTCGACCGACATACA CGGATTCACCTCCGGATACGGGCATCGTGCAAGCCACAGCGATGCTCGCCACTGGCTTCGAATCGGCCGGCAAGCACGCC GCGACTCTCCGCGGCCAACCGCCTGGAGCCGATGAGTGCCGCATGGGAGCGCGCGCCATCGGCCTCGGCCGGTCCGGAAT GGAGCGGCTCGCCATCGAGCAGTTTGTGTCGTCGGCGCGCGCTGCGTACGACTGTGCTCGCGCACGCATTCATGGTCGCG CATCCGCGTTCGCCAATGCGCCGGCATCCGCCCAGCCGTCGAATCACCTCGATGCGAACGGAGATCCAATGCGGATCGCC TTTCTTCCCCGATTCGCGAGCGAGCCGTTCCAGGAAGCCTTTTCGATACCGGGCGATACGGCCGGCATCGCCTCCGCTTT CGCGGTAGCGGACGATCAAACAGGTCATCGCAACCGTATGGCCGCGGCAAATTCAGACTGA
Upstream 100 bases:
>100_bases CCGACGCTCCGGAACACGGGCACGGCAATCGATGCATGACTATCGCGCCTTGTTGCGCGCGTGACTCGGCCCAGCATGTT TCGCCGCGTCGATTTCATCG
Downstream 100 bases:
>100_bases TCTGATTGATCGGTGTTTGTCATTCGCGCAAGATCAATGGCGGTTTACTTCCAGGTTGAGGTAACCGTGCCGAGGTAAGC GCTCGCCCTCGGCCGTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MRNASDHRATSRPCVRLIVPAPTFAAAIHPRFVPPLRISISMPIRQTHIWIFGFMIACVLAMSGPLTYTFENTFRQTVDI DRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAARSPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPF PFQHGFDTAIHAGPPIPAPPESTLARTDAPPRDETPFEPDMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDT TAPPDTTPERHDALANVNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWTELFARELPATATQAAPTRHAVSF AATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTVAPPYPPADTLPPGTRPTYTDSPPDTGIVQATAMLATGFESAGKHA ATLRGQPPGADECRMGARAIGLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRIA FLPRFASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD
Sequences:
>Translated_526_residues MRNASDHRATSRPCVRLIVPAPTFAAAIHPRFVPPLRISISMPIRQTHIWIFGFMIACVLAMSGPLTYTFENTFRQTVDI DRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAARSPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPF PFQHGFDTAIHAGPPIPAPPESTLARTDAPPRDETPFEPDMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDT TAPPDTTPERHDALANVNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWTELFARELPATATQAAPTRHAVSF AATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTVAPPYPPADTLPPGTRPTYTDSPPDTGIVQATAMLATGFESAGKHA ATLRGQPPGADECRMGARAIGLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRIA FLPRFASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD >Mature_526_residues MRNASDHRATSRPCVRLIVPAPTFAAAIHPRFVPPLRISISMPIRQTHIWIFGFMIACVLAMSGPLTYTFENTFRQTVDI DRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAARSPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPF PFQHGFDTAIHAGPPIPAPPESTLARTDAPPRDETPFEPDMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDT TAPPDTTPERHDALANVNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWTELFARELPATATQAAPTRHAVSF AATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTVAPPYPPADTLPPGTRPTYTDSPPDTGIVQATAMLATGFESAGKHA ATLRGQPPGADECRMGARAIGLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRIA FLPRFASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56174; Mature: 56174
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNASDHRATSRPCVRLIVPAPTFAAAIHPRFVPPLRISISMPIRQTHIWIFGFMIACVL CCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH AMSGPLTYTFENTFRQTVDIDRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAAR HHCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC SPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPFPFQHGFDTAIHAGPPIPAPP CCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC ESTLARTDAPPRDETPFEPDMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDT CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC TAPPDTTPERHDALANVNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWTELF CCCCCCCCHHHHHHHCCCCCEEEEEHHEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHH ARELPATATQAAPTRHAVSFAATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTVAPPYP HHHCCCCHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCCCCCCCCCC PADTLPPGTRPTYTDSPPDTGIVQATAMLATGFESAGKHAATLRGQPPGADECRMGARAI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHCHHHC GLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE FLPRFASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD ECCCHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRNASDHRATSRPCVRLIVPAPTFAAAIHPRFVPPLRISISMPIRQTHIWIFGFMIACVL CCCCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH AMSGPLTYTFENTFRQTVDIDRKKQGTVAEATAFDARSAEQPSAPDADRMHELPRIDAAR HHCCCEEEEEHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCC SPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFAPFPFQHGFDTAIHAGPPIPAPP CCCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCC ESTLARTDAPPRDETPFEPDMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDT CHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCC TAPPDTTPERHDALANVNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWTELF CCCCCCCCHHHHHHHCCCCCEEEEEHHEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHH ARELPATATQAAPTRHAVSFAATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTVAPPYP HHHCCCCHHHCCCCHHHHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEECCCCCCCCCCC PADTLPPGTRPTYTDSPPDTGIVQATAMLATGFESAGKHAATLRGQPPGADECRMGARAI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCEEEECCCCCCHHHHHHCHHHC GLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE FLPRFASEPFQEAFSIPGDTAGIASAFAVADDQTGHRNRMAAANSD ECCCHHCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA