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The map label for this gene is narP [C]

Identifier: 126445180

GI number: 126445180

Start: 1060700

End: 1061500

Strand: Reverse

Name: narP [C]

Synonym: BURPS668_A1105

Alternate gene names: 126445180

Gene position: 1061500-1060700 (Counterclockwise)

Preceding gene: 126443136

Following gene: 126443180

Centisome position: 33.94

GC content: 69.04

Gene sequence:

>801_bases
ATGGATCGACTGTTCAGCGAAGTAGCGATGCATCAAGCGTTCGGACGCGCGCTCGATCATCTCGGCGAGCCGCGCTTCTG
GCGCTTGCTGATCCTGTTTCTCAACGAGATGGTGCCGTTCGACAACGCGCTCGCGACCGCGCTCGGCCGCGACGGCGCGC
CCGTCGTGCTCGACGAATACGACACGGGCGGCGCGAGCGGGCCGTCGCCCGTGCCGCTGTACCTGAACGGGCTCTACCTG
CTCGATCCGTTCCTGCAGGCCGCGCACGACGGCCTTGCCGACGGCTGCTACCGGCTCGAGGAAGTCGCGCCCGATCTGTT
CCGGCAGAGCGAATATTTCCTCAGTTATTTTCGCGACGCGGTGGGCGAGGACGAATTGCAGATCATCGTGCGCACGCGGC
CGGACGAGATGCTGTCGCTGTCGCTCGGCGCGCACGCGCGCTTCGACACCGACACGCTCGGCCGCCTGGCCGCCTGCTCG
CCGTGGCTGCTCGCGGCGATCCGCCAGCACCGGCGGCTGCAGGGCGACGCATCGCGCGCGCGGGCGAGCGACGATCTCGC
CGAGCGCGTCGAGCGCGCGCTCGCGAGCTTCGGCGCGCCGTTGCTGACCGAGCGCGAGATGGCGATCGCGCGGCTCGTGC
TGCGCGGCAACTCGTCGAAGGCGATCGCCGAGCGGCTCGCGATCTCGCCCGAGACCGTCAAGGTGCATCGGCGGCACTTG
TATTCGAAGCTCGGCATCTCGTCGCAGCCGGAACTATTCTCGCTGTTCCTGCAGGCGCTCGGGCACGACGCGCCGCGCTG
A

Upstream 100 bases:

>100_bases
TTTTTGAACGCCCATACTCGGGCAACGCATGGCGCGCAGTCTAGGAAGCCAAATTGCGCGCCGCCATTCCCCCTTGGGGT
TACGCCAAACCGGGGCGCAC

Downstream 100 bases:

>100_bases
CGCGGCCGCGCGCGCACGGCCGCGCGCCGGCGGGAGACGATCGCCTTTCCTCCATGCGCAAAACCGCCTATGGTTTGAAA
GGGTGCGCGACGGGCGCGCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MDRLFSEVAMHQAFGRALDHLGEPRFWRLLILFLNEMVPFDNALATALGRDGAPVVLDEYDTGGASGPSPVPLYLNGLYL
LDPFLQAAHDGLADGCYRLEEVAPDLFRQSEYFLSYFRDAVGEDELQIIVRTRPDEMLSLSLGAHARFDTDTLGRLAACS
PWLLAAIRQHRRLQGDASRARASDDLAERVERALASFGAPLLTEREMAIARLVLRGNSSKAIAERLAISPETVKVHRRHL
YSKLGISSQPELFSLFLQALGHDAPR

Sequences:

>Translated_266_residues
MDRLFSEVAMHQAFGRALDHLGEPRFWRLLILFLNEMVPFDNALATALGRDGAPVVLDEYDTGGASGPSPVPLYLNGLYL
LDPFLQAAHDGLADGCYRLEEVAPDLFRQSEYFLSYFRDAVGEDELQIIVRTRPDEMLSLSLGAHARFDTDTLGRLAACS
PWLLAAIRQHRRLQGDASRARASDDLAERVERALASFGAPLLTEREMAIARLVLRGNSSKAIAERLAISPETVKVHRRHL
YSKLGISSQPELFSLFLQALGHDAPR
>Mature_266_residues
MDRLFSEVAMHQAFGRALDHLGEPRFWRLLILFLNEMVPFDNALATALGRDGAPVVLDEYDTGGASGPSPVPLYLNGLYL
LDPFLQAAHDGLADGCYRLEEVAPDLFRQSEYFLSYFRDAVGEDELQIIVRTRPDEMLSLSLGAHARFDTDTLGRLAACS
PWLLAAIRQHRRLQGDASRARASDDLAERVERALASFGAPLLTEREMAIARLVLRGNSSKAIAERLAISPETVKVHRRHL
YSKLGISSQPELFSLFLQALGHDAPR

Specific function: This Protein Activates The Expression Of The Nitrate Reductase (Narghji) And Formate Dehydrogenase-N (Fdnghi) Operons And Represses The Transcription Of The Fumarate Reductase (Frdabcd) Operon In Response To A Nitrate/Nitrite Induction Signal Transmitted

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 29569; Mature: 29569

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRLFSEVAMHQAFGRALDHLGEPRFWRLLILFLNEMVPFDNALATALGRDGAPVVLDEY
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECC
DTGGASGPSPVPLYLNGLYLLDPFLQAAHDGLADGCYRLEEVAPDLFRQSEYFLSYFRDA
CCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEDELQIIVRTRPDEMLSLSLGAHARFDTDTLGRLAACSPWLLAAIRQHRRLQGDASRA
CCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
RASDDLAERVERALASFGAPLLTEREMAIARLVLRGNSSKAIAERLAISPETVKVHRRHL
HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
YSKLGISSQPELFSLFLQALGHDAPR
HHHCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDRLFSEVAMHQAFGRALDHLGEPRFWRLLILFLNEMVPFDNALATALGRDGAPVVLDEY
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEECC
DTGGASGPSPVPLYLNGLYLLDPFLQAAHDGLADGCYRLEEVAPDLFRQSEYFLSYFRDA
CCCCCCCCCCCCHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VGEDELQIIVRTRPDEMLSLSLGAHARFDTDTLGRLAACSPWLLAAIRQHRRLQGDASRA
CCCCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH
RASDDLAERVERALASFGAPLLTEREMAIARLVLRGNSSKAIAERLAISPETVKVHRRHL
HCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHH
YSKLGISSQPELFSLFLQALGHDAPR
HHHCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7789814 [H]