| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
Click here to switch to the map view.
The map label for this gene is ordL [H]
Identifier: 126445143
GI number: 126445143
Start: 685534
End: 686940
Strand: Reverse
Name: ordL [H]
Synonym: BURPS668_A0721
Alternate gene names: 126445143
Gene position: 686940-685534 (Counterclockwise)
Preceding gene: 126444089
Following gene: 126444189
Centisome position: 21.96
GC content: 74.2
Gene sequence:
>1407_bases TTGCCGCACGCGCGTGCGCGCCGCGCCCCCGTTTTTCCGCATCGCGCCCCGCCGCCGCACGACATGGCGAAGCGCATGCC GCCCGACTTTCACGGCCCGCCCATGACCGATACCTTCGCCCGCCGCGCCGACGCGCTCGCACGCCGCTCGTATTACGAAG CCACCGTTCGCCGCCCGGCCGACGACCCGGCGCTCGCCGAGGCGCTCGACGTCGACGTCTGCGTGATCGGCGCGGGCTTC GCCGGTCTGTCGACCGCGCTCGACTGCCGCGCGCGCGGCCTGTCGGTCGCCGTGCTCGACGCACGCCGGCCGGGCTGGGG CGCGTCCGGCCGCAACGGCGGACAGTTGATCGCGGGCTTCGCGAAGGACGGCGAGATCGAGCGCCAGCTCGGCGTGGAAG GCGCGCGCGCGGCCTGGGCGCTGTCGCTCGATGCGATCGCGCTCGTCGACGAGCGCATCGCGCGCCACGGCATCGACTGC GATCTCGCGCGCGGCTATCTGAGCGTCGCGACGCATCCGCGCCGCGTGCCGGAGCTGCGGCAGTGGATGGAGGGCGCGAC GGCGCGCTGGGGCCACCCGTCGCTCGAATGGCTCGACGCGCGCGCGGTGCGCGCGCGCATCGCTTCGCCGCGCTATGTCG CGGGCGTCCATGATCCGCTGTCCGGCCATCTGCATCCGCTCAAGTACTGCCTCGGGCTCGCCGACGCCGCGCGGCGCGAA GGCGCGCGGCTGTTCTCGCACACGCCCGCGCTCGAAGTCGTGCGCGGCGCGCGGCCCATCGTGCGCACGCCCGCGGGCGA GGTGCGCTGCCGCCACGTCGTCGCGTGCTGCAACGCCGGCCCGGGCGGCGTGCTGCCCGCCGCGACGGCCGCGCGCATCG CACCCGTCGCGTCGTACATCGTCGCGACCGAGCCGCTCGGCGCCGATCGCGCGAACGCGCTGATCCCCCGGCGCGAGGCG GCATGCGACAACAACTTCTTTCTCGACTACTTCCGGCTGTCCGCCGATCACCGGATGCTGTTCGGCGGCCGCGCGAGCTC GGCGGGCGCGTCGCCCGACGCGCTCGTCGATGCGATGCGCAAACGGATGACGGGCGCGTTCCCGCAGCTCGCCGACACGC GCATCGAATTCGCATGGGGCGGCTTCGTCGACGTGACCCGCAATCGCGCGCCGGATTTCGGCGCGATCGATCCGAACTAC TTCTATCTCCAGGGCTTCAGCGGCCACGGCGTCGCGCTGGCCGGCATCGCGGGCCGCATCGTCGCGCAGGCGATCGCGGG CGATTCGCGCGCGTTCGATCTGTTCGCTCGGCTGCGGCACCGGCGCTTTCCCGGCGGCCCCGCGTGGCGGCAGTCCGCGC TCGCGCTCGGCATGCTGTATCACCGCGTGCGCGAGCTGCTGCGCTGA
Upstream 100 bases:
>100_bases TTCCTGCGGAACGACGGCTCGTACAGCAAGTCCAACGATCTGCTCGCGACGCAGTTCATCTACTCGTTCTGACGTTCGCG GCGCAACGGCGTGCGGCGGC
Downstream 100 bases:
>100_bases GGAGCGCGCGGGCCCGCGCCGCGCAAGCGGCGCCGCCGAACCGAACCCCCATCAAAGCGATCCCTACGTCATGCTCAAGT TCATCAACCAACCGCACGCC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MPHARARRAPVFPHRAPPPHDMAKRMPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGF AGLSTALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDC DLARGYLSVATHPRRVPELRQWMEGATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARRE GARLFSHTPALEVVRGARPIVRTPAGEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREA ACDNNFFLDYFRLSADHRMLFGGRASSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNY FYLQGFSGHGVALAGIAGRIVAQAIAGDSRAFDLFARLRHRRFPGGPAWRQSALALGMLYHRVRELLR
Sequences:
>Translated_468_residues MPHARARRAPVFPHRAPPPHDMAKRMPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGF AGLSTALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDC DLARGYLSVATHPRRVPELRQWMEGATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARRE GARLFSHTPALEVVRGARPIVRTPAGEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREA ACDNNFFLDYFRLSADHRMLFGGRASSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNY FYLQGFSGHGVALAGIAGRIVAQAIAGDSRAFDLFARLRHRRFPGGPAWRQSALALGMLYHRVRELLR >Mature_467_residues PHARARRAPVFPHRAPPPHDMAKRMPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFA GLSTALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCD LARGYLSVATHPRRVPELRQWMEGATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREG ARLFSHTPALEVVRGARPIVRTPAGEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAA CDNNFFLDYFRLSADHRMLFGGRASSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYF YLQGFSGHGVALAGIAGRIVAQAIAGDSRAFDLFARLRHRRFPGGPAWRQSALALGMLYHRVRELLR
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=419, Percent_Identity=38.1861575178998, Blast_Score=306, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 50642; Mature: 50511
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHARARRAPVFPHRAPPPHDMAKRMPPDFHGPPMTDTFARRADALARRSYYEATVRRPA CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DDPALAEALDVDVCVIGAGFAGLSTALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGF CCHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEE AKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCDLARGYLSVATHPRRVPELR CCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH QWMEGATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARRE HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHC GARLFSHTPALEVVRGARPIVRTPAGEVRCRHVVACCNAGPGGVLPAATAARIAPVASYI CCHHHHCCCHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VATEPLGADRANALIPRREAACDNNFFLDYFRLSADHRMLFGGRASSAGASPDALVDAMR HCCCCCCCCHHHHCCCCHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHH KRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRI HHHCCCCCHHHCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHH VAQAIAGDSRAFDLFARLRHRRFPGGPAWRQSALALGMLYHRVRELLR HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PHARARRAPVFPHRAPPPHDMAKRMPPDFHGPPMTDTFARRADALARRSYYEATVRRPA CCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC DDPALAEALDVDVCVIGAGFAGLSTALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGF CCHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEE AKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCDLARGYLSVATHPRRVPELR CCCCCHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH QWMEGATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARRE HHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHC GARLFSHTPALEVVRGARPIVRTPAGEVRCRHVVACCNAGPGGVLPAATAARIAPVASYI CCHHHHCCCHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VATEPLGADRANALIPRREAACDNNFFLDYFRLSADHRMLFGGRASSAGASPDALVDAMR HCCCCCCCCHHHHCCCCHHHCCCCCEEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHH KRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRI HHHCCCCCHHHCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHHHH VAQAIAGDSRAFDLFARLRHRRFPGGPAWRQSALALGMLYHRVRELLR HHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]