| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126445087
Identifier: 126445087
GI number: 126445087
Start: 325452
End: 326297
Strand: Reverse
Name: 126445087
Synonym: BURPS668_A0357
Alternate gene names: NA
Gene position: 326297-325452 (Counterclockwise)
Preceding gene: 126442560
Following gene: 126444362
Centisome position: 10.43
GC content: 69.5
Gene sequence:
>846_bases GTGTCGAACGCGCCCGCGCCCCGCACGCTGACCGTGCCCCCCCTGCCGCCGCTGACCGAGGCGGAATCGGCCGACGTGAC GCGCCGCGCGCTCGCGCTGCGCGCGGCGTTCGCGCAGGACGTCGCACGGCGCCTGAACGTGCCCGACGCCGAACAGCGCG CGTACGGCGAACGCCTGCAGCAGACGCTCGACGCGAACGGCCTGGGCGAGCTCGCGCGCGAATACGTCGTGCTCGTCGAT CGCGCGCCGAACGTACAGGCAGTCTTTCTCTACTTTCGCACGACGCGCAGCAACGCGTGGCAGATGATCGGCGCATCGCC CGTCGCAACCGGCCTGCCCGGCCAGTACGATCACTTCGTCACGCCGCTCGGCGTGTTCGAGCACACGCCGGAGAACATGG ATTTCCGCGCGGAAGGCACGACCAACGACAACGGCATCCGCGGCTACGGCCAGCGCGACATGCGCATCTACGATTTCGGC TGGACCGATGCGGAGCGCGGCTGGGGCAAGGGCGGCGTCTCGCAGATGCGCTTCCAGATGCACGCGACCGATCCCGAGTA CCTCGAACCGCTGCTCGGCATCCGCCATTCGAAGGGATGCGTGCGGATTCCGGCTTCGCTGAACGTTTTCCTCGATCAGC ACGGAATCCTCGACGCCGAATACGAAGCGCGCGCGGCAGGCGGCGATCCGCCGTGGGTATTGCGCGCGCACCGGCAAGTC ACGCCGTGGGCGGGCCGCTATCTCGTCGTCATCGATTCGCAGCGCAAGGCGCGCCCCGCATGGTCGCCCGCGCCGGGCAA GAAGGCGCAGGCGAAGCTGCCGAAGGGCGGCGACACGGCGGATTGA
Upstream 100 bases:
>100_bases GTCCGCCCCCGCGGCGCCATCGCGCGGCGCATCGCCCAAGCCGGGCAGCGCGGCGAGCGCGCTCGCCTCGCCGGCATCCG CCGCATCCGCGCCGTCGCCC
Downstream 100 bases:
>100_bases GCGTGCGTGCTTCGATGGGAGGGAGTGCAGGCGGTGCGGGTGGCGTGGTTGGCGTGGTTGGCGTGGTTGGCGTGGTTGGC GTGGTTGGCGTGGGTAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVD RAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFG WTDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV TPWAGRYLVVIDSQRKARPAWSPAPGKKAQAKLPKGGDTAD
Sequences:
>Translated_281_residues MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVD RAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFG WTDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV TPWAGRYLVVIDSQRKARPAWSPAPGKKAQAKLPKGGDTAD >Mature_280_residues SNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDR APNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGW TDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVT PWAGRYLVVIDSQRKARPAWSPAPGKKAQAKLPKGGDTAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31030; Mature: 30899
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQ CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFV HHHCCCCHHHHHHHEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHC TPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWGKGGVSQMRFQM CCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEE HATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV ECCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCC TPWAGRYLVVIDSQRKARPAWSPAPGKKAQAKLPKGGDTAD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQ CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFV HHHCCCCHHHHHHHEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHC TPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWGKGGVSQMRFQM CCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEE HATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV ECCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCC TPWAGRYLVVIDSQRKARPAWSPAPGKKAQAKLPKGGDTAD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA