| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is phnW [H]
Identifier: 126444998
GI number: 126444998
Start: 549117
End: 550226
Strand: Reverse
Name: phnW [H]
Synonym: BURPS668_A0582
Alternate gene names: 126444998
Gene position: 550226-549117 (Counterclockwise)
Preceding gene: 126442991
Following gene: 126442980
Centisome position: 17.59
GC content: 72.25
Gene sequence:
>1110_bases ATGCCAGAACGTGATCCCATCCTGTTGACGCCCGGCCCGCTGACGACCTCGCGCATGACGCGCGACGCGATGCTGCGCGA CTGGGGCTCGTGGGACGCCGCTTTCAACCGGCTGACGAAGAGCGTCTGCGCGGATCTCGTGCGGATCGCGGGCGGCGGCG ACGCATATGTGTGCGTGCCGCTGCAAGGCAGCGGCACGTTTGCGGTCGAAGCGACGCTCGGCACGCTCGTGCCGCGCGAC GCCCGCGTGCTCGTGCCGAACAATGGCGCGTACTGCGCGCGGATCGCGGCGATCCTGCGCCGGCTCGGCGTCGCGCACGT CGAGCTGCCGTTCGCCGAGGACGAGCCGGCGAGCGCGCACGCGATCGACGCGGCGCTCGCGCGCGACGCGCGCCTCACGC ACGTCGCGCTCGTGCATCTGGAGACGAGCGCCGGCCTGCTGAACCCGCTCGACGACATCGCCGCCGTCTGCCGCGCGCGC GGCAAGGCGCTGATCGTCGATGCGATGAGCTCGTTCGGTGCGCTGCCGATCGCGCTCGCGGCAAGCGGCATCGACGCGCT GATCTCGGCGAGCGGCAAGTGCCTGGAAGGAGTGCCCGGCATGGGCTTCGCGATCGTGCGGCGTTCGGCGCTCGAAGCGG CCGAGGGGCGCTCGCCTTCGGTCGCGCTCGATCTGCACGACCAGTACGCATACATGCAGCGCACGTCGCAATGGCGCTTC ACGCCGCCGACGCACGTGCTCGCCGCGCTGCGCGCCGCGCTCGACCAGTTCTTCGACGAAGGCGGGCAGCCGGCGCGCGG CGCGCGCTACGCGCGGAACTGCGCGACGCTCGTCGACGGCATGCGCGCGCTCGGCTTCGAGCCGTTTCTCGACGCGCGCG CGCAGGCGAGCGTGATCGTCACGTTCTACGCGCCCGCCGATCCCGCGTATGCGTTCCCGGCGTTCTACGCGGCCGTGCGC GACGCGGGCTACGTGCTGTATCCGGGCAAGCTGACGACGGCCGACACGTTTCGCGTCGGCTGCATCGGCGCGCTCGGCGC CGACGAGATGCGCGGCGCGGTGGCGGCGATCGGCGGCGCGCTCGAATCGCTCGGAATCGCGATGCGGTGA
Upstream 100 bases:
>100_bases TCCGTGACGATTGACTTCATTTCCAAAAAACGACACATTTCGCCACTATCCTCCACATCCATCGACCACTGTTCCCGATC TTTTCCGGAGTGACGAAGCC
Downstream 100 bases:
>100_bases CGGGGAAGCAGTGAAGTCGCAAAGGGAAAGCGCGGGCCGCGGCGCGAAGGCGGGAACGACCAGTCGAGCGTTGCGGGCCA TGCCCTGCCGTTATCGGGTT
Product: 2-aminoethylphosphonate--pyruvate transaminase
Products: NA
Alternate protein names: 2-aminoethylphosphonate aminotransferase; AEP transaminase; AEPT [H]
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRD ARVLVPNNGAYCARIAAILRRLGVAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRAR GKALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVR DAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR
Sequences:
>Translated_369_residues MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRD ARVLVPNNGAYCARIAAILRRLGVAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRAR GKALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVR DAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR >Mature_368_residues PERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVPLQGSGTFAVEATLGTLVPRDA RVLVPNNGAYCARIAAILRRLGVAHVELPFAEDEPASAHAIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARG KALIVDAMSSFGALPIALAASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRFT PPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIVTFYAPADPAYAFPAFYAAVRD AGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGALESLGIAMR
Specific function: Involved in phosphonate degradation [H]
COG id: COG0075
COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557289, Length=307, Percent_Identity=26.7100977198697, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17536281, Length=306, Percent_Identity=23.8562091503268, Blast_Score=78, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017688 - InterPro: IPR000192 - InterPro: IPR012703 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =2.6.1.37 [H]
Molecular weight: Translated: 38817; Mature: 38686
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVP CCCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LQGSGTFAVEATLGTLVPRDARVLVPNNGAYCARIAAILRRLGVAHVELPFAEDEPASAH ECCCCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH AIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARGKALIVDAMSSFGALPIALA HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHH ASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIV CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEE TFYAPADPAYAFPAFYAAVRDAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGA EEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LESLGIAMR HHHCCCCCC >Mature Secondary Structure PERDPILLTPGPLTTSRMTRDAMLRDWGSWDAAFNRLTKSVCADLVRIAGGGDAYVCVP CCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE LQGSGTFAVEATLGTLVPRDARVLVPNNGAYCARIAAILRRLGVAHVELPFAEDEPASAH ECCCCCEEEEEEHHHCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHH AIDAALARDARLTHVALVHLETSAGLLNPLDDIAAVCRARGKALIVDAMSSFGALPIALA HHHHHHHCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECHHHCCCCHHHHH ASGIDALISASGKCLEGVPGMGFAIVRRSALEAAEGRSPSVALDLHDQYAYMQRTSQWRF HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCCCC TPPTHVLAALRAALDQFFDEGGQPARGARYARNCATLVDGMRALGFEPFLDARAQASVIV CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEE TFYAPADPAYAFPAFYAAVRDAGYVLYPGKLTTADTFRVGCIGALGADEMRGAVAAIGGA EEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH LESLGIAMR HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA