| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444934
Identifier: 126444934
GI number: 126444934
Start: 68906
End: 70162
Strand: Reverse
Name: 126444934
Synonym: BURPS668_A0081
Alternate gene names: NA
Gene position: 70162-68906 (Counterclockwise)
Preceding gene: 126442602
Following gene: 126445013
Centisome position: 2.24
GC content: 70.41
Gene sequence:
>1257_bases ATGCCTGCCTCTAGCGGCCGCTTCTCCGCCTCGCTCGCGGGCCGGATACCGCCCGCGGGAGCCGACAAGACTGCAGCGCT CGTCCTGGCGAGCCGCGGCATGCGCGGCTTCTGCGACGGGTTCATTGCCGTGCTGCTGCCAGCGTATCTGCTCGCGCTCG GGTTTTCACAGCTGGACGTCGGACTGGTCAGTACCGTGACGTTGCTGGGTTCCGCACTCGCGACGATTGCCGTCGGCATG CTGGCCGGCCGCGTCGCACACCGGCGGATGCTGATGCTCGCCGCGGCACTGATGGCCGCCACGGGCATCGGCTTCGCGAG TCTGTCCACGCTGTGGGCGCTCATCGCCGTCGCGTTCGTCGGCACGCTCAATCCAAGCGCCGGTGACGTCAGCCTGTTTC TGCCGCTCGAGCAGTCGCGCCTTGCCGAGGCCGCCGCGGGCGATGCCCGCACCGCGCTCTTTGCGCGATACAGCCTGATC GGCGCGCTATCAGCGGCAGCCGGCTCGCTGGCGGCAGGTCTGCCACTCTGGCTCGCCGCGCACACCAGCATCCCGCTGCC CGGCGCGATGCGCGGCATGTTCGTCGTCTATGCCGGCGCCGGCGTTGCCGTCTGGCTGCTCTATCGACATTTGCCGCTCC CCGAAGCCCACGCGCCCGCCGCGCCGCCGCCGCTCGGCCCCTCCCGGCGCATCGTCACCCGGCTCGCGATGCTGTTCAGC GTCGACGCGTTCGCAGGGGGCCTCGTCGTCAATTCACTGCTGTCGCTGTGGCTGATGCAGCGCTTCGGGCTCTCGGTCGC CGCTGCCGGCCGGTTCTTCTTCTGCGCGGGCTTGCTCTCGGCGGGTTCCCAGCTCGCGGCCACGCCGCTGTCACGCAGGA TCGGTCTGCTGAACACAATGGTGTTCACGCATATCCCGTCAAGCGTCTGCCTGATCGGCGCTGCCTTCGCGCCCTCGCTG CCGTTGACGTTGGCGCTGTTGCTGTTGCGAAGCGCGCTTTCGCAAATGGACGTGCCGACGCGCACCGCCTTCGTCATGGC GGTCGTGACGCCGGCGGAGCGCCCGGCCGCCGCCGGCTTGACGTCCGTCCCGCGCAGCCTCGCGGCGGCGATCGCGCCCG CTCTGGCGGGCGGCCTGCTCGGGCTCGGCTGGCTTGGCGCGCCGTTGGTGGCATGCGGCGCGCTGAAAATCGGGTACGAC CTCACGCTGCTGGCGTCTTTTCGACACGTCGAACCGGATGGCGGGCCCGGCCGGTAA
Upstream 100 bases:
>100_bases GCGATTTCCGTGGGCTTATCCGGCAATTTCCGGGACGACCTCGAGCAGTTGAGATACGGCATGGTGATGTATGACGCGCT CTACGCGTGGTGCCGGCGCG
Downstream 100 bases:
>100_bases ACGGCAATCGCGATCGAGCGGCAACGGTGCAAAAAGGCGAGGAACCCTGCAAAGCGACGCATCGACGTGAAACATGCGCG CTTCCTGACAACCCATGTCG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Sugar Transporter Related Protein; Transporter Protein; Transport Transmembrane Protein; Multidrug Efflux Permease; Transporter Facilitator Family; ABC Transporter Permease Protein
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MPASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGM LAGRVAHRRMLMLAAALMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLI GALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSL PLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYD LTLLASFRHVEPDGGPGR
Sequences:
>Translated_418_residues MPASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGM LAGRVAHRRMLMLAAALMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLI GALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSL PLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYD LTLLASFRHVEPDGGPGR >Mature_417_residues PASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDVGLVSTVTLLGSALATIAVGML AGRVAHRRMLMLAAALMAATGIGFASLSTLWALIAVAFVGTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLIG ALSAAAGSLAAGLPLWLAAHTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFSV DAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTMVFTHIPSSVCLIGAAFAPSLP LTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGLTSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYDL TLLASFRHVEPDGGPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322584, Length=427, Percent_Identity=22.9508196721311, Blast_Score=108, Evalue=1e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42489; Mature: 42358
Theoretical pI: Translated: 11.36; Mature: 11.36
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDV CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVSTVTLLGSALATIAVGMLAGRVAHRRMLMLAAALMAATGIGFASLSTLWALIAVAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLIGALSAAAGSLAAGLPLWLAA HCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS CCCCCCCHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH VFTHIPSSVCLIGAAFAPSLPLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGL HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHCCH TSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYDLTLLASFRHVEPDGGPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PASSGRFSASLAGRIPPAGADKTAALVLASRGMRGFCDGFIAVLLPAYLLALGFSQLDV CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVSTVTLLGSALATIAVGMLAGRVAHRRMLMLAAALMAATGIGFASLSTLWALIAVAFV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH GTLNPSAGDVSLFLPLEQSRLAEAAAGDARTALFARYSLIGALSAAAGSLAAGLPLWLAA HCCCCCCCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH HTSIPLPGAMRGMFVVYAGAGVAVWLLYRHLPLPEAHAPAAPPPLGPSRRIVTRLAMLFS CCCCCCCHHHHCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VDAFAGGLVVNSLLSLWLMQRFGLSVAAAGRFFFCAGLLSAGSQLAATPLSRRIGLLNTM HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHH VFTHIPSSVCLIGAAFAPSLPLTLALLLLRSALSQMDVPTRTAFVMAVVTPAERPAAAGL HHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHEEEEEECCCCCCHHCCH TSVPRSLAAAIAPALAGGLLGLGWLGAPLVACGALKIGYDLTLLASFRHVEPDGGPGR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA