| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444876
Identifier: 126444876
GI number: 126444876
Start: 2283056
End: 2284828
Strand: Reverse
Name: 126444876
Synonym: BURPS668_A2344
Alternate gene names: NA
Gene position: 2284828-2283056 (Counterclockwise)
Preceding gene: 126442517
Following gene: 126443795
Centisome position: 73.06
GC content: 58.77
Gene sequence:
>1773_bases ATGCAAAAGCGTCTGAACCGCGCCGCGCGGCTGAGAATCGATTCGATTCCTCCGCCGGTCGGCGGCCTCAATACACTCGA CGCCGTCGCCAACATGCCGCCGACGGATGCCATCATCCTCGAGAACTATTTCCCGGGCACTGCGGATGTGCGCGTGCGCA ACGGCTTCATGCGCTGGGCAACTGGCATTGCTGGCGCCGTCGAGACGCTTGCGCCGTACACTTCAGGTACGCATGCGCAG TTGTTCGCGATCTCGAATGGCTCGCTCTACGACGTCACGAGCAACGGATCAGTCGGCGCTGCGCTCATTTCTGGATTGAC GAATTCCCGCTGGCAATGGGTCAATTTCACCAACGCCGGTCTAACCTTCCTCGTGATGGTGAACGGCGTCGACGCCCCGC TTCTGTATGACGGCACGACCTGGAGGCGCATCCGCAGTGCGGTTCCGCAGAGCATTACGTCGATCACGGCATCCGGCACA ACTGCGACCCTGACGACGGGCACTGCACACGGTCTGCAGACTGGCGACCAGATCACGGTCAGCGGTGCGGTGCCGGCGGT GTACAACGGCACCTTCACTGTCACTGTGACGGGCGCAAATACCCTGACCTATACGATGACCGGTGCGCCAGGTGGTCCAG CGACCACCGTCGGAACGTACACCGTCCTCTGGAGCATTACCGGCGTCGATCCGACGACGTTCGTGCACATAAACGTGTTC GCAAATCGTTTGTGGTTCACGCAGACGCATACGATGCAGTCGTGGTATTTGCCGATCGGACAGGTAGCGGGTGCCGCGGC GCTCTTCGATATCGGCCCGCAAACCGTGCTCGGCGGCTTCCTGATGGGAATGGCGACATGGAATATCGATAACTCGGCGG GACTGAACCCGTATGCTGTTTTCGTCACGTCGCGCGGCGAGGTGATCGTTTATCAGGGATCCGATCCATCGCAGTCGTCA AGCTTCGGGATATCCGCACGCTTCCGAATCGGGCCGCCCGTCGGGCGTCGCTTCTACGAGAAATACGGATCGGACATCGT GTTCATCGGGGCTGATGGGCTGACGCCGCTGAGCCAGGCGTTGCTCACCGATCGCCAGCAGCGAAAGATCACGCTGACGG AGAAAATCAGTCCCACCGTGCAGGCCGATTATTTCGCCTATCAGGGGAATTTCGGATGGCAATGCACGTTGTTCCCCGAG GGCAATAAGCTCGTCGTGAATGTGCCCGATCAGGAGGACCAGCTCTCGCACCAATACGTGATGAATACCATCACGGGCGC TTGGTGCAAGTTCACTGGCTGGAATGCCTTCTGCTTCACCTATTTCAACGGGAATCTATACTTCGGGGGCGCCGCCTTCG TCGCACAGGCGGATGTCACGAATAGCGATGCCGGCATGGCAATTTCTTCGGACATCGAACCTGCTTTCAACTATTTCGGC ATGCGGGGCCAAGAGAAGCTCTTCAAGATGATGCGGCCGGTGTTCATCACCAATGCGCCTCTCGCTCCGCAACTCGATAT CGCGCTCGATTTCAGTTCTGCCCCGCCGACTTCGACGCCGACCTTTTCCCAGGCGCATTTCAATAGGTGGGATATCACTC CCTGGGATGAGGTGCCATGGAATGACGGGCACATCGTGCAGACCGACTGGGAGAGTATCGACGGGCTCGGCTATGCAGCG ACGTTCCGCATGCGATGTCAAACGATCGACGTCGAATTCGCGCTGGAGTCGTTCGATTTCATGTTCGAACCGAAACTTAC ACCGACACTTTGA
Upstream 100 bases:
>100_bases CGCGCCGGCGGCTCGCGCGTATTGCCGCTCAACGCGCGCGCAGAACCGCCGGTGCTGTTGGGTTCGGCCAACGTGCCCGA TACTGGATTCGGCTCTTGAT
Downstream 100 bases:
>100_bases TTTTCCTGCTGCTTAGAATCGCGGCATAGCTTCTCCATCTTCATGCACGCGGCCCGCGACGGGCTTCGGTAAAAGGTGCG CAGGCCTGGTCGGCGCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MQKRLNRAARLRIDSIPPPVGGLNTLDAVANMPPTDAIILENYFPGTADVRVRNGFMRWATGIAGAVETLAPYTSGTHAQ LFAISNGSLYDVTSNGSVGAALISGLTNSRWQWVNFTNAGLTFLVMVNGVDAPLLYDGTTWRRIRSAVPQSITSITASGT TATLTTGTAHGLQTGDQITVSGAVPAVYNGTFTVTVTGANTLTYTMTGAPGGPATTVGTYTVLWSITGVDPTTFVHINVF ANRLWFTQTHTMQSWYLPIGQVAGAAALFDIGPQTVLGGFLMGMATWNIDNSAGLNPYAVFVTSRGEVIVYQGSDPSQSS SFGISARFRIGPPVGRRFYEKYGSDIVFIGADGLTPLSQALLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTLFPE GNKLVVNVPDQEDQLSHQYVMNTITGAWCKFTGWNAFCFTYFNGNLYFGGAAFVAQADVTNSDAGMAISSDIEPAFNYFG MRGQEKLFKMMRPVFITNAPLAPQLDIALDFSSAPPTSTPTFSQAHFNRWDITPWDEVPWNDGHIVQTDWESIDGLGYAA TFRMRCQTIDVEFALESFDFMFEPKLTPTL
Sequences:
>Translated_590_residues MQKRLNRAARLRIDSIPPPVGGLNTLDAVANMPPTDAIILENYFPGTADVRVRNGFMRWATGIAGAVETLAPYTSGTHAQ LFAISNGSLYDVTSNGSVGAALISGLTNSRWQWVNFTNAGLTFLVMVNGVDAPLLYDGTTWRRIRSAVPQSITSITASGT TATLTTGTAHGLQTGDQITVSGAVPAVYNGTFTVTVTGANTLTYTMTGAPGGPATTVGTYTVLWSITGVDPTTFVHINVF ANRLWFTQTHTMQSWYLPIGQVAGAAALFDIGPQTVLGGFLMGMATWNIDNSAGLNPYAVFVTSRGEVIVYQGSDPSQSS SFGISARFRIGPPVGRRFYEKYGSDIVFIGADGLTPLSQALLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTLFPE GNKLVVNVPDQEDQLSHQYVMNTITGAWCKFTGWNAFCFTYFNGNLYFGGAAFVAQADVTNSDAGMAISSDIEPAFNYFG MRGQEKLFKMMRPVFITNAPLAPQLDIALDFSSAPPTSTPTFSQAHFNRWDITPWDEVPWNDGHIVQTDWESIDGLGYAA TFRMRCQTIDVEFALESFDFMFEPKLTPTL >Mature_590_residues MQKRLNRAARLRIDSIPPPVGGLNTLDAVANMPPTDAIILENYFPGTADVRVRNGFMRWATGIAGAVETLAPYTSGTHAQ LFAISNGSLYDVTSNGSVGAALISGLTNSRWQWVNFTNAGLTFLVMVNGVDAPLLYDGTTWRRIRSAVPQSITSITASGT TATLTTGTAHGLQTGDQITVSGAVPAVYNGTFTVTVTGANTLTYTMTGAPGGPATTVGTYTVLWSITGVDPTTFVHINVF ANRLWFTQTHTMQSWYLPIGQVAGAAALFDIGPQTVLGGFLMGMATWNIDNSAGLNPYAVFVTSRGEVIVYQGSDPSQSS SFGISARFRIGPPVGRRFYEKYGSDIVFIGADGLTPLSQALLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTLFPE GNKLVVNVPDQEDQLSHQYVMNTITGAWCKFTGWNAFCFTYFNGNLYFGGAAFVAQADVTNSDAGMAISSDIEPAFNYFG MRGQEKLFKMMRPVFITNAPLAPQLDIALDFSSAPPTSTPTFSQAHFNRWDITPWDEVPWNDGHIVQTDWESIDGLGYAA TFRMRCQTIDVEFALESFDFMFEPKLTPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64124; Mature: 64124
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKRLNRAARLRIDSIPPPVGGLNTLDAVANMPPTDAIILENYFPGTADVRVRNGFMRWA CCHHHCHHHEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHH TGIAGAVETLAPYTSGTHAQLFAISNGSLYDVTSNGSVGAALISGLTNSRWQWVNFTNAG HHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCC LTFLVMVNGVDAPLLYDGTTWRRIRSAVPQSITSITASGTTATLTTGTAHGLQTGDQITV EEEEEEEECCCCCEEECCCHHHHHHHHCCHHHHEEEECCCEEEEECCCCCCCCCCCEEEE SGAVPAVYNGTFTVTVTGANTLTYTMTGAPGGPATTVGTYTVLWSITGVDPTTFVHINVF ECCCCEEECCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEE ANRLWFTQTHTMQSWYLPIGQVAGAAALFDIGPQTVLGGFLMGMATWNIDNSAGLNPYAV ECEEEEEEECCCCEECCCHHHHCCCEEEECCCHHHHHHHHHHHHEEECCCCCCCCCEEEE FVTSRGEVIVYQGSDPSQSSSFGISARFRIGPPVGRRFYEKYGSDIVFIGADGLTPLSQA EEECCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHH LLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTLFPEGNKLVVNVPDQEDQLSHQYV HHCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEECCCCHHHHHHHHH MNTITGAWCKFTGWNAFCFTYFNGNLYFGGAAFVAQADVTNSDAGMAISSDIEPAFNYFG HHHHCCCEEEECCCCEEEEEEECCEEEECCEEEEEEECCCCCCCCEEEECCCCHHHHHCC MRGQEKLFKMMRPVFITNAPLAPQLDIALDFSSAPPTSTPTFSQAHFNRWDITPWDEVPW CCCHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDGHIVQTDWESIDGLGYAATFRMRCQTIDVEFALESFDFMFEPKLTPTL CCCEEEEECHHCCCCCCEEEEEEEEEEEEEEEEEEECCCEEECCCCCCCC >Mature Secondary Structure MQKRLNRAARLRIDSIPPPVGGLNTLDAVANMPPTDAIILENYFPGTADVRVRNGFMRWA CCHHHCHHHEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCEEEEECCHHHHH TGIAGAVETLAPYTSGTHAQLFAISNGSLYDVTSNGSVGAALISGLTNSRWQWVNFTNAG HHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHCCCCCCEEEEEECCCC LTFLVMVNGVDAPLLYDGTTWRRIRSAVPQSITSITASGTTATLTTGTAHGLQTGDQITV EEEEEEEECCCCCEEECCCHHHHHHHHCCHHHHEEEECCCEEEEECCCCCCCCCCCEEEE SGAVPAVYNGTFTVTVTGANTLTYTMTGAPGGPATTVGTYTVLWSITGVDPTTFVHINVF ECCCCEEECCEEEEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEEEEE ANRLWFTQTHTMQSWYLPIGQVAGAAALFDIGPQTVLGGFLMGMATWNIDNSAGLNPYAV ECEEEEEEECCCCEECCCHHHHCCCEEEECCCHHHHHHHHHHHHEEECCCCCCCCCEEEE FVTSRGEVIVYQGSDPSQSSSFGISARFRIGPPVGRRFYEKYGSDIVFIGADGLTPLSQA EEECCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHH LLTDRQQRKITLTEKISPTVQADYFAYQGNFGWQCTLFPEGNKLVVNVPDQEDQLSHQYV HHCCCCCCEEEEEECCCCCEEEEEEEEECCCCEEEEEEECCCEEEEECCCCHHHHHHHHH MNTITGAWCKFTGWNAFCFTYFNGNLYFGGAAFVAQADVTNSDAGMAISSDIEPAFNYFG HHHHCCCEEEECCCCEEEEEEECCEEEECCEEEEEEECCCCCCCCEEEECCCCHHHHHCC MRGQEKLFKMMRPVFITNAPLAPQLDIALDFSSAPPTSTPTFSQAHFNRWDITPWDEVPW CCCHHHHHHHHCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC NDGHIVQTDWESIDGLGYAATFRMRCQTIDVEFALESFDFMFEPKLTPTL CCCEEEEECHHCCCCCCEEEEEEEEEEEEEEEEEEECCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA