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The map label for this gene is 126444854

Identifier: 126444854

GI number: 126444854

Start: 161410

End: 161928

Strand: Reverse

Name: 126444854

Synonym: BURPS668_A0173

Alternate gene names: NA

Gene position: 161928-161410 (Counterclockwise)

Preceding gene: 126444137

Following gene: 126442678

Centisome position: 5.18

GC content: 63.78

Gene sequence:

>519_bases
ATGCGGCATCCTGAGGGACGGCATCGGGCCGCCTATCTTCCGTCGCTGCTCGACCGGCTGCAAGACGACGCGCCGCACGC
GCTCAGCGAATCGCCCGATGCCTATGCGCCGAGCGCCGACGAAATGCGCCGCATCGTGCAGCGAGACCTGAGCCTGTTGC
TGAACACCAGCAATCTGGACGACGAGGTGGACGCCCGCCGCTATCCGCTCGTGTCGGCATCTGTCGTCAACTATGGCGTG
CCGCCTTTGGCGGGCAGCTATCTGCACGACCGGAACCGGGAAACGATCGAGCGCCTCGTGCGCACCGCGATCGCCCACTT
CGAGCCGCGCCTCATTGCGGACTCCTTGGCGATCAGGCCGCTCGCGGCGCAACCGGGCGCCAGCTACAACAAATTGACGT
TCGAAATCAGCGCGCTCGTGCAATGGTCGCCGTATCCGCTGGAGTTGCGCATCCAGAGCACGTTCGACCTCGAATTGAAT
CGAGTCACGCTCGAGAAGACGACGCTCAACGGAAATTGA

Upstream 100 bases:

>100_bases
ACCAATGTCGTGGCGCTCGGACAACGAACATGGACCACCGATCAGGGCGACTGGGGCATGCTCCAGATCGGCGGATGCCG
CTTCACGGGCGAAAGCGACG

Downstream 100 bases:

>100_bases
TATGGACCCGCAGTTTCTCGATCACTACAACCGCGAATTGACCTACATGCGGGAGTTGTCCGCGGAATTCGCGGCGCAAC
ACCCGAAGATCGCGCGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: GPW/Gp25 Family Protein; Cytoplasmic Protein; Type VI Secretion System Core Protein; Replication/Virulence Associated Protein; T6SS Lysozyme-Related D; Type VI Secretion System Protein ImpF; Cytoplasmic Protein SciD; Type VI Secretion System Lysozyme-Related Family Protein; Type VI Secretion System Lysozyme-Like Protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRHPEGRHRAAYLPSLLDRLQDDAPHALSESPDAYAPSADEMRRIVQRDLSLLLNTSNLDDEVDARRYPLVSASVVNYGV
PPLAGSYLHDRNRETIERLVRTAIAHFEPRLIADSLAIRPLAAQPGASYNKLTFEISALVQWSPYPLELRIQSTFDLELN
RVTLEKTTLNGN

Sequences:

>Translated_172_residues
MRHPEGRHRAAYLPSLLDRLQDDAPHALSESPDAYAPSADEMRRIVQRDLSLLLNTSNLDDEVDARRYPLVSASVVNYGV
PPLAGSYLHDRNRETIERLVRTAIAHFEPRLIADSLAIRPLAAQPGASYNKLTFEISALVQWSPYPLELRIQSTFDLELN
RVTLEKTTLNGN
>Mature_172_residues
MRHPEGRHRAAYLPSLLDRLQDDAPHALSESPDAYAPSADEMRRIVQRDLSLLLNTSNLDDEVDARRYPLVSASVVNYGV
PPLAGSYLHDRNRETIERLVRTAIAHFEPRLIADSLAIRPLAAQPGASYNKLTFEISALVQWSPYPLELRIQSTFDLELN
RVTLEKTTLNGN

Specific function: Unknown

COG id: COG3518

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19371; Mature: 19371

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHPEGRHRAAYLPSLLDRLQDDAPHALSESPDAYAPSADEMRRIVQRDLSLLLNTSNLD
CCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
DEVDARRYPLVSASVVNYGVPPLAGSYLHDRNRETIERLVRTAIAHFEPRLIADSLAIRP
CCHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC
LAAQPGASYNKLTFEISALVQWSPYPLELRIQSTFDLELNRVTLEKTTLNGN
CCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCEECEEEEEEEEEEEECCCC
>Mature Secondary Structure
MRHPEGRHRAAYLPSLLDRLQDDAPHALSESPDAYAPSADEMRRIVQRDLSLLLNTSNLD
CCCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
DEVDARRYPLVSASVVNYGVPPLAGSYLHDRNRETIERLVRTAIAHFEPRLIADSLAIRP
CCHHHHHCCCHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCC
LAAQPGASYNKLTFEISALVQWSPYPLELRIQSTFDLELNRVTLEKTTLNGN
CCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCEECEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA