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The map label for this gene is visC [H]

Identifier: 126444640

GI number: 126444640

Start: 1161235

End: 1162401

Strand: Reverse

Name: visC [H]

Synonym: BURPS668_A1219

Alternate gene names: 126444640

Gene position: 1162401-1161235 (Counterclockwise)

Preceding gene: 126443973

Following gene: 126445347

Centisome position: 37.17

GC content: 68.12

Gene sequence:

>1167_bases
ATGAAAAACAACCCAGTCGATGTACTGATCAACGGTAGCGGCATCGCCGGCGTCGCGCTTGCGCATCTGCTCGGCGCGCG
GGGCCACAGCGTCACGGTGATCGAGCGCGCGGCGCGCAACCGCGCGCAGAACGGCGCCGATCTGCTGAAGCCTTCCGGCA
TCGGCGTCGTTCGCGCAATGGGGTTGCTCGACGACGTATTCGCCGCCGGCGGCCTCAGGCGCGACGCGATGAGGCTGTAC
CACGACAAGGCGCCGATCGCGTCGCTCGACTACCGGAGCGCCAGCGCGCTCGGCTACTTCATCCTGATACCGTGCGAGCA
ATTGCGCCGTTTGCTGCTCGCGAAGCTCGACGGCCTGCCGAACGTGCGCTTGCGCTTCGAAACGTCGATCGAGCGCATCG
AGCGGGACGCCGACGGCACGGTGACGTCGCTCACGCTGAGCGACGGCGAGCGCGTCACGCCCACCGTGCTGGTGGGCGCC
GACGGCGCGCGCTCGATGATCCGCGACGACGTGCTGCGCATGCCTGCCGAGCGCGTGCCGTACGCGACGCCGATGGCGTT
CGGCACGATCGCGCTCACCGACAGCGTGCGCGAATGCAACAGGCTGTACGTCGACTCGAACCAGGGGCTCGCCTACTTCT
ATCCGATCGGCGACCAAGCGACGCGCCTCGTCGTCAGCTTTCCCGCCGACGAGATGCAAGGCTATCTCGCCGACACGACG
CGCACGAAGCTGCTCGCGCGCCTGAACGAATTCGTCGGCGACGAGAGCGCCGACGCGATGGCCGCGATCGGCGCGGGCAC
CGCGTTCCCGTTGATTCCGCTCGGGCGGATGAATCTCGACCGCTATCACAAGCGCAACGCCGTGCTGCTCGGCGACGCCG
CGCACAGCATTCATCCGATCACGGGCCAGGGCATGAACCTCGCGATCGAGGATGCGGGCGAGCTCGGCGCGTGCCTCGAT
CTGCACCTGAGCGGACAGATCACGCTCGCCGACGCGCTGGAGCGATTCGAGCGCATCCGGCGCCCCGTCAACGAAGCGGT
GATCTCGTACGGTCACACGCTCGCGACCACATACCACGATCGCGCCGCGCTCGTCGCGAACTTCCGGTCGCAGTTGCAGA
CGAGCGGGCGCGACGCCGCGTGGCTGGGCGCCGCGGTCGAAGTGTGA

Upstream 100 bases:

>100_bases
CCGGCTCTTTCATAGACCTGCATTGCAATTCGCCCGAGCGGTCGCGCCCGGCGCCAGGACAGACCGCCGACGGCGATTAC
CGGAATCAATCGAACCCACC

Downstream 100 bases:

>100_bases
GCGCCGGCGCGGCGCGCGGCGGCCCGCGAAACGCGCGGGCGGAGTGCGCCGTCGAGGCTCGCGACGCCGGCGGGCAAAGC
GGGAATCGGCCCCGAGACGA

Product: putative monooxygenase

Products: 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVIERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMRLY
HDKAPIASLDYRSASALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSLTLSDGERVTPTVLVGA
DGARSMIRDDVLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADTT
RTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNAVLLGDAAHSIHPITGQGMNLAIEDAGELGACLD
LHLSGQITLADALERFERIRRPVNEAVISYGHTLATTYHDRAALVANFRSQLQTSGRDAAWLGAAVEV

Sequences:

>Translated_388_residues
MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVIERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMRLY
HDKAPIASLDYRSASALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSLTLSDGERVTPTVLVGA
DGARSMIRDDVLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADTT
RTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNAVLLGDAAHSIHPITGQGMNLAIEDAGELGACLD
LHLSGQITLADALERFERIRRPVNEAVISYGHTLATTYHDRAALVANFRSQLQTSGRDAAWLGAAVEV
>Mature_388_residues
MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVIERAARNRAQNGADLLKPSGIGVVRAMGLLDDVFAAGGLRRDAMRLY
HDKAPIASLDYRSASALGYFILIPCEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSLTLSDGERVTPTVLVGA
DGARSMIRDDVLRMPAERVPYATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADTT
RTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNAVLLGDAAHSIHPITGQGMNLAIEDAGELGACLD
LHLSGQITLADALERFERIRRPVNEAVISYGHTLATTYHDRAALVANFRSQLQTSGRDAAWLGAAVEV

Specific function: Not yet known [H]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiH/COQ6 family [H]

Homologues:

Organism=Escherichia coli, GI1789273, Length=348, Percent_Identity=28.1609195402299, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042
- InterPro:   IPR018168
- InterPro:   IPR010971 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.14.13.- [C]

Molecular weight: Translated: 41873; Mature: 41873

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVIERAARNRAQNGADLLKPSGIGVVRAM
CCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHH
GLLDDVFAAGGLRRDAMRLYHDKAPIASLDYRSASALGYFILIPCEQLRRLLLAKLDGLP
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCC
NVRLRFETSIERIERDADGTVTSLTLSDGERVTPTVLVGADGARSMIRDDVLRMPAERVP
CEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHCC
YATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADTT
CCCCHHHEEEEEHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHH
RTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNAVLLGDAAHSIHPI
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCC
TGQGMNLAIEDAGELGACLDLHLSGQITLADALERFERIRRPVNEAVISYGHTLATTYHD
CCCCCEEEEECCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
RAALVANFRSQLQTSGRDAAWLGAAVEV
HHHHHHHHHHHHHHCCCCCEECCCEECC
>Mature Secondary Structure
MKNNPVDVLINGSGIAGVALAHLLGARGHSVTVIERAARNRAQNGADLLKPSGIGVVRAM
CCCCCEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCCHHCCCCCCHHHHHH
GLLDDVFAAGGLRRDAMRLYHDKAPIASLDYRSASALGYFILIPCEQLRRLLLAKLDGLP
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCC
NVRLRFETSIERIERDADGTVTSLTLSDGERVTPTVLVGADGARSMIRDDVLRMPAERVP
CEEEEEHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHCCHHHCC
YATPMAFGTIALTDSVRECNRLYVDSNQGLAYFYPIGDQATRLVVSFPADEMQGYLADTT
CCCCHHHEEEEEHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEECCHHHHHHHHHHHH
RTKLLARLNEFVGDESADAMAAIGAGTAFPLIPLGRMNLDRYHKRNAVLLGDAAHSIHPI
HHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCC
TGQGMNLAIEDAGELGACLDLHLSGQITLADALERFERIRRPVNEAVISYGHTLATTYHD
CCCCCEEEEECCCCCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHH
RAALVANFRSQLQTSGRDAAWLGAAVEV
HHHHHHHHHHHHHHCCCCCEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! [C]

Specific reaction: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! = 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1339425; 9278503 [H]