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The map label for this gene is 126444593

Identifier: 126444593

GI number: 126444593

Start: 2493327

End: 2493740

Strand: Reverse

Name: 126444593

Synonym: BURPS668_A2589

Alternate gene names: NA

Gene position: 2493740-2493327 (Counterclockwise)

Preceding gene: 126445045

Following gene: 126443899

Centisome position: 79.74

GC content: 66.43

Gene sequence:

>414_bases
TTGAATGAACGAGGCTTTGGCGCATGGAATCGGATCGAGCGCGAAACGCTGACCGAGCGGATCGAGCGGCAGGTCGTCTC
GGGCGACGCGCTGACGATGGCGAGGCTGTATCTGAAGAAAGGCGCGTTCGTCGGGACGCACTCGCATCCGAACGAGCAGC
TCACCTACATCCTCGAGGGGCGCCTGCTGTTTCGTTACGGCGAGCATCTCGAACACGAGATCGAGGTCGGGCCGGGGGAG
ATCCTGCATCTCCCGGCGAACGTGCCGCACAACGCGCTGTGCCTCGAAGACGCGGTCGATCTCGACGTGTTCACGCCGGT
GCGGACGGACTGGCTCGCGCCCGGCGGCAACCGCTATTTCGCCGGCGCGTCGGCCGCGACGTCGCCCACGCCGGTTCCGT
CGGCGAGCCGATGA

Upstream 100 bases:

>100_bases
CGGGATGTGCAGCGGGCAACGGGCGGCGTGCGCGTTCGCGAGCTGTCCGCGTGAGCGCGCGCTTTTCACACGATCGAGCG
AGGAGGAAATCGTGACAGGT

Downstream 100 bases:

>100_bases
CTACCGTTTACCGAAGCCGACGAACCGAGGAGGCGCCGTGCTCATTCAGGATGCGTTGCTCAAGATGTCGTTTTACGTGT
CGCTCGTGCTGATCGTACCT

Product: pectin degradation protein KdgF

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Pectin Degradation Protein KdgF; Cupin Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Degradation Protein

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEIEVGPGE
ILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR

Sequences:

>Translated_137_residues
MNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEIEVGPGE
ILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR
>Mature_137_residues
MNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEIEVGPGE
ILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15207; Mature: 15207

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECC
RLLFRYGEHLEHEIEVGPGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYF
EEEEECCCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCEEE
AGASAATSPTPVPSASR
ECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEG
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCEEEEEECC
RLLFRYGEHLEHEIEVGPGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYF
EEEEECCCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCEEE
AGASAATSPTPVPSASR
ECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA