| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444502
Identifier: 126444502
GI number: 126444502
Start: 1167963
End: 1168802
Strand: Reverse
Name: 126444502
Synonym: BURPS668_A1231
Alternate gene names: NA
Gene position: 1168802-1167963 (Counterclockwise)
Preceding gene: 126443359
Following gene: 126443090
Centisome position: 37.37
GC content: 72.74
Gene sequence:
>840_bases GTGATGAAATTCAAGACTTTGCTCGTCCATGTCGACGATAGCCGCCAGAGCGGCGCGCGCACCGAGTTCGCGCTCGACCT CGCGCGGCGCTGGGACGCACACGTGATCGGCCTGTACGTCGTGTGCCAGGATCTGATGCGGCCGCTCTTTCGCCGCGACG AAAGCCTGCGGCTCGCCGCAAACGAGGCGCAGCACGCGGCGCGGCGCGACGCCGCGCAGGCGCGCTTCACGGCCGCCGGC GAACGCGCGGGCGTGAACTTCGAATGGCGCGCGCCCGCCGGGCCGCCCACCGACGTGGCCACGCTGCACGCGCGCCACGC GGACCTCGTCGTGCTCGGCCAGCCCGAGCCGGGCGACGCCGCCGCCTACATCGAACCGCATTTCGTCGACGACGTCGTGA TGAGCGGCGGCGTGCCGGCGATCGTGCTGCCGTTCACGGGCGCGATGCGCACCTTCGGCGAGAACGTGCTGCTCGCGTGG GACGGCAGCCGCGAAGCGGCGCGCGCGGTCGCGGATGCGCTGCCGCTGCTCAAGCGCGCGCGCTTCGTGACCGTCGAAAG CGTGTTGCGCCGCCGCGCGACGGGCGCCGGTCTCGCGCCCGCGGGCATCGACGTCGCCGCGTATCTCGGCCGGCACGGCA TCCAGGCGTCGTTTTCGGCGTCGGCGCACGTGCCGGGCGTCGACACCGGCGCGGCCCTGCTGAACCGCGCGGCGGACCTG CACGCGGACCTGCTCGTGATGGGCGCTTACGGCCACACGCGCGCACGCGAACGCGTGCTGGGCGGCGTGACTCGGACGAT GCTCGAATCGATGACGGTGCCGGTGCTGCTGTCGCATTGA
Upstream 100 bases:
>100_bases CCGAACGGCTGCTGCGGCACGCCCGCTGCCCGGTGCTGATGATTCCGGCCCGCGGCGCGCCGGCCGCCGACGCGAACGCC ACTCATCCGACGGAGACTGC
Downstream 100 bases:
>100_bases GCGATGCGGCGGCGGCGATCGAAGCCGATGCCGCCGCCGGGCCGCGCCCCGCTCGTGCGCCCGCCGGGGCGGCGCGGATC GCTTTCGCCCCTTCGTCCCC
Product: universal stress family protein
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family Protein; Universal Stress Protein Family; Universal Stress Family Protein; Universal Stress UspA Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; UspA-Like Protein; Universal Stress Family; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like; Universal Stress Related Protein; Universal Stress Protein UspA Family
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MMKFKTLLVHVDDSRQSGARTEFALDLARRWDAHVIGLYVVCQDLMRPLFRRDESLRLAANEAQHAARRDAAQARFTAAG ERAGVNFEWRAPAGPPTDVATLHARHADLVVLGQPEPGDAAAYIEPHFVDDVVMSGGVPAIVLPFTGAMRTFGENVLLAW DGSREAARAVADALPLLKRARFVTVESVLRRRATGAGLAPAGIDVAAYLGRHGIQASFSASAHVPGVDTGAALLNRAADL HADLLVMGAYGHTRARERVLGGVTRTMLESMTVPVLLSH
Sequences:
>Translated_279_residues MMKFKTLLVHVDDSRQSGARTEFALDLARRWDAHVIGLYVVCQDLMRPLFRRDESLRLAANEAQHAARRDAAQARFTAAG ERAGVNFEWRAPAGPPTDVATLHARHADLVVLGQPEPGDAAAYIEPHFVDDVVMSGGVPAIVLPFTGAMRTFGENVLLAW DGSREAARAVADALPLLKRARFVTVESVLRRRATGAGLAPAGIDVAAYLGRHGIQASFSASAHVPGVDTGAALLNRAADL HADLLVMGAYGHTRARERVLGGVTRTMLESMTVPVLLSH >Mature_279_residues MMKFKTLLVHVDDSRQSGARTEFALDLARRWDAHVIGLYVVCQDLMRPLFRRDESLRLAANEAQHAARRDAAQARFTAAG ERAGVNFEWRAPAGPPTDVATLHARHADLVVLGQPEPGDAAAYIEPHFVDDVVMSGGVPAIVLPFTGAMRTFGENVLLAW DGSREAARAVADALPLLKRARFVTVESVLRRRATGAGLAPAGIDVAAYLGRHGIQASFSASAHVPGVDTGAALLNRAADL HADLLVMGAYGHTRARERVLGGVTRTMLESMTVPVLLSH
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29964; Mature: 29964
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKFKTLLVHVDDSRQSGARTEFALDLARRWDAHVIGLYVVCQDLMRPLFRRDESLRLAA CCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEH NEAQHAARRDAAQARFTAAGERAGVNFEWRAPAGPPTDVATLHARHADLVVLGQPEPGDA HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHEEECCCCEEEECCCCCCCE AAYIEPHFVDDVVMSGGVPAIVLPFTGAMRTFGENVLLAWDGSREAARAVADALPLLKRA EEEECCHHHHHHHHCCCCCEEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH RFVTVESVLRRRATGAGLAPAGIDVAAYLGRHGIQASFSASAHVPGVDTGAALLNRAADL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH HADLLVMGAYGHTRARERVLGGVTRTMLESMTVPVLLSH CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC >Mature Secondary Structure MMKFKTLLVHVDDSRQSGARTEFALDLARRWDAHVIGLYVVCQDLMRPLFRRDESLRLAA CCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEH NEAQHAARRDAAQARFTAAGERAGVNFEWRAPAGPPTDVATLHARHADLVVLGQPEPGDA HHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHEEECCCCEEEECCCCCCCE AAYIEPHFVDDVVMSGGVPAIVLPFTGAMRTFGENVLLAWDGSREAARAVADALPLLKRA EEEECCHHHHHHHHCCCCCEEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH RFVTVESVLRRRATGAGLAPAGIDVAAYLGRHGIQASFSASAHVPGVDTGAALLNRAADL HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH HADLLVMGAYGHTRARERVLGGVTRTMLESMTVPVLLSH CCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA