Click here to switch to the map view.

The map label for this gene is oruR [H]

Identifier: 126444440

GI number: 126444440

Start: 102248

End: 103252

Strand: Reverse

Name: oruR [H]

Synonym: BURPS668_A0121

Alternate gene names: 126444440

Gene position: 103252-102248 (Counterclockwise)

Preceding gene: 126442424

Following gene: 126444317

Centisome position: 3.3

GC content: 49.55

Gene sequence:

>1005_bases
ATGGCGGTCACTCGTACTGCGGCGCAGCGTCCTGCGCCGTTGCATACTATTTTCATTACGCTTGAGGTAATGAAGCGTAT
TGGATTGTCCAGAGAGACTCTGCTAGAAGGAACTGGCATTTCACCTTCCGACGTCGAACGTCCTAACGCGATGGTGACGC
ATGCTCAGGAGATGGTCCTATTTGCCAATGCGCTGAAAGCTACCGGAAATTCCGCGATTGGCCTTCACATCGGCAACGAG
ATACCGGTGACGGCGTACGGCCTTCGGGCTCACGCAATGCTTGTTAGTCCCACGCTTGGCGATGCGATGCGCCTGGCGTT
CGAACACCCGTTGCTAGGGATTAGCTATTTTCGGATGAAGTTGTTGATCGATGGCGAAGTGGCGCGAATTATCGTCGGCG
GCTACACGTATCGCCACGACTTACTTGTCATCAACACTGATATGTGCTTTACAGCGGTCCGCCGACAGATGATTGATTTG
ATAGGAAGATCGCCGCATTTTACGCGCATCGGATTTGCTTATCCAAAGCCCTCTCATGCAGATAGCTACTCTGAATACTT
CTCATGCCCGGCGATATTTGATTCAGAAATAAATTTTCTAGAGTTTGATGCTTCAATTTTAATGACGAAATTGCCTCTCG
CCCACCCCATTGAATATGAAGTGGCGAGAAAAGCTTGCGAGAAACGGGAGTTTGAATTGGCCCATTGGATGCCGACTGAC
CTCGTTGGGCAGCTACTCTGCATGATGTATGAAAATCCGATCTCCCAAGATGTTTTTGAGTTCGCCGATCGGCTTGGGAT
GTCATTGCGCAGTTTGCAGCGCAAGCTTAAAGATATGGGGACATCATTCAGTGCTTTGCAAGACCTTGTGCGCCAGGATA
TCGCGTCAAAATACCTCACTGAAAAGCACTATACCGCCAAAGAAATAGCGGCTCGCCTTGGATACAAAAATGCTTCTGCG
TTTAGCCGTGCGATGAGGCGCTGGTCAAAAATTTCTGTCGACTAA

Upstream 100 bases:

>100_bases
TGGCAGCGTGGTGCGTTGGACGAATACGGCTGCCAGGTCGTATTCTCAAAGTCGCTGGAAGAATAAAGTTTGCCGAGGAT
GGTGGATGAAACCAGTAGCC

Downstream 100 bases:

>100_bases
TTCCGATTTGCTGAGTGCCACTCGAGGGCGAGCATCGTACCGCGGCAACGCGCACCGCCGCAGTGGCAAGCATACTCTTG
ACGAACTTTCTCTGAGTTCG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MAVTRTAAQRPAPLHTIFITLEVMKRIGLSRETLLEGTGISPSDVERPNAMVTHAQEMVLFANALKATGNSAIGLHIGNE
IPVTAYGLRAHAMLVSPTLGDAMRLAFEHPLLGISYFRMKLLIDGEVARIIVGGYTYRHDLLVINTDMCFTAVRRQMIDL
IGRSPHFTRIGFAYPKPSHADSYSEYFSCPAIFDSEINFLEFDASILMTKLPLAHPIEYEVARKACEKREFELAHWMPTD
LVGQLLCMMYENPISQDVFEFADRLGMSLRSLQRKLKDMGTSFSALQDLVRQDIASKYLTEKHYTAKEIAARLGYKNASA
FSRAMRRWSKISVD

Sequences:

>Translated_334_residues
MAVTRTAAQRPAPLHTIFITLEVMKRIGLSRETLLEGTGISPSDVERPNAMVTHAQEMVLFANALKATGNSAIGLHIGNE
IPVTAYGLRAHAMLVSPTLGDAMRLAFEHPLLGISYFRMKLLIDGEVARIIVGGYTYRHDLLVINTDMCFTAVRRQMIDL
IGRSPHFTRIGFAYPKPSHADSYSEYFSCPAIFDSEINFLEFDASILMTKLPLAHPIEYEVARKACEKREFELAHWMPTD
LVGQLLCMMYENPISQDVFEFADRLGMSLRSLQRKLKDMGTSFSALQDLVRQDIASKYLTEKHYTAKEIAARLGYKNASA
FSRAMRRWSKISVD
>Mature_333_residues
AVTRTAAQRPAPLHTIFITLEVMKRIGLSRETLLEGTGISPSDVERPNAMVTHAQEMVLFANALKATGNSAIGLHIGNEI
PVTAYGLRAHAMLVSPTLGDAMRLAFEHPLLGISYFRMKLLIDGEVARIIVGGYTYRHDLLVINTDMCFTAVRRQMIDLI
GRSPHFTRIGFAYPKPSHADSYSEYFSCPAIFDSEINFLEFDASILMTKLPLAHPIEYEVARKACEKREFELAHWMPTDL
VGQLLCMMYENPISQDVFEFADRLGMSLRSLQRKLKDMGTSFSALQDLVRQDIASKYLTEKHYTAKEIAARLGYKNASAF
SRAMRRWSKISVD

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37602; Mature: 37471

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTRTAAQRPAPLHTIFITLEVMKRIGLSRETLLEGTGISPSDVERPNAMVTHAQEMVL
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FANALKATGNSAIGLHIGNEIPVTAYGLRAHAMLVSPTLGDAMRLAFEHPLLGISYFRMK
HHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHEE
LLIDGEVARIIVGGYTYRHDLLVINTDMCFTAVRRQMIDLIGRSPHFTRIGFAYPKPSHA
EEECCCEEEEEECCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
DSYSEYFSCPAIFDSEINFLEFDASILMTKLPLAHPIEYEVARKACEKREFELAHWMPTD
CCHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCCHH
LVGQLLCMMYENPISQDVFEFADRLGMSLRSLQRKLKDMGTSFSALQDLVRQDIASKYLT
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EKHYTAKEIAARLGYKNASAFSRAMRRWSKISVD
HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVTRTAAQRPAPLHTIFITLEVMKRIGLSRETLLEGTGISPSDVERPNAMVTHAQEMVL
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
FANALKATGNSAIGLHIGNEIPVTAYGLRAHAMLVSPTLGDAMRLAFEHPLLGISYFRMK
HHHHHHCCCCCEEEEEECCCCCEEEECCEEEEEEECCCHHHHHHHHHHCCCCHHHHHHEE
LLIDGEVARIIVGGYTYRHDLLVINTDMCFTAVRRQMIDLIGRSPHFTRIGFAYPKPSHA
EEECCCEEEEEECCEEEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC
DSYSEYFSCPAIFDSEINFLEFDASILMTKLPLAHPIEYEVARKACEKREFELAHWMPTD
CCHHHHHCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHCCCHH
LVGQLLCMMYENPISQDVFEFADRLGMSLRSLQRKLKDMGTSFSALQDLVRQDIASKYLT
HHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
EKHYTAKEIAARLGYKNASAFSRAMRRWSKISVD
HHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]