| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is tauA [H]
Identifier: 126444436
GI number: 126444436
Start: 2149207
End: 2150217
Strand: Reverse
Name: tauA [H]
Synonym: BURPS668_A2222
Alternate gene names: 126444436
Gene position: 2150217-2149207 (Counterclockwise)
Preceding gene: 126445336
Following gene: 126445177
Centisome position: 68.75
GC content: 70.13
Gene sequence:
>1011_bases ATGATTCTCAAGCGCATCCTCATCGCCGCGTCTTTCACCGCCGCCGCGGCCTCGGCCGTTCATTCGCACGCCGCCCGGGC GGAGACGGTGAACGTCGCCTATCAGTACGGCGCCGATCCGGCGAAGCTCGCGCAGGCGGGCGCCGCGTACGAGAAGGCCA CCGGCTGGAAGATCAACTGGCGCCGCTTCGATTCGGGCGCGGATGTCGTCGCGGCGCTCGCCTCGGGCGATGTCCAGCTC GGCGATGTCGGGCAGAGTCCGTTTGCCGCGGCGGTGTCGCGCGGCGTGCCGATCCAGGCGGTTGCGCTGAACGCGATCAC CGGCGTGTCCGAGGCGCTCGTCGTGCGCCGCGGCGCGCATATCGACAAGCCGGCCGATCTCGTCGGCAAGACGATCGCGA CGCCTTACGCGTCGAACTGCCATTACGCGCTGCTCGCCGCGCTCAAGCACTGGGGCATCGACGCGCAGCGCGTGAAGATC GTGAATCTCGGGCCGACCGAGATCGTCGCCGCATGGGCGCGCGGCGTGATCGACGCCGCCTATACGTGGGACCCGGCGCT CGGCCGCGCGAAGGCGAGCGGCGGCAAGGTGCTCGTCGATTCGGCCGAAGTCGGCAAGTGGGGCGCGCCGACATTCGATC TGTGGGCGGTGCGCAGCGATTTCGCGCAAGCGCATCCGGATTTCGTGTCGAAGTTCGTGAAGGTGACGACGCAGGCGATC GCCGACTATCGCGCGAACGGCAAGGCATGGACGAGCGCGTCGCGGCAGGTAGCCGAAATCTCGCGGCTGAGCGGCGCGGC GGCGGGCGACATTGCGCAACTGCTCGCCGGCAATCTCTACCCGAGCGCGGCCGAGCAGGCGTCGCCCGAGCTGCTCGGCG GCGGCACGGCCGACGCGATCGCGTCGACCGCGCGCTTCCTGAAGGAGCAGCGCAAGATCGACCGCGTGCTGCCCGATTAC CGGCCGACGGTGACGGACCGGTTCGTCCGCGCGGCGATCGCCGCGCGCTGA
Upstream 100 bases:
>100_bases ATATCCTTCGCAGATTTCGTTGTTTAACGGACGGCGCGCAAGCCGGTAATCTCGACGGCCATCCGAATTCAACGCATCCA GCAGAAGGGAAGGCCCGTTC
Downstream 100 bases:
>100_bases GACGACGCGGCGGCATCGGCATGGCGAAGCTTTGCGCGCAACAGGTATCCGTCGTCTACGCGTCGCGGCGCGGCGCGCTG ACGGCGCTCGAGAACGTATC
Product: taurine ABC transporter periplasmic taurine-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MILKRILIAASFTAAAASAVHSHAARAETVNVAYQYGADPAKLAQAGAAYEKATGWKINWRRFDSGADVVAALASGDVQL GDVGQSPFAAAVSRGVPIQAVALNAITGVSEALVVRRGAHIDKPADLVGKTIATPYASNCHYALLAALKHWGIDAQRVKI VNLGPTEIVAAWARGVIDAAYTWDPALGRAKASGGKVLVDSAEVGKWGAPTFDLWAVRSDFAQAHPDFVSKFVKVTTQAI ADYRANGKAWTSASRQVAEISRLSGAAAGDIAQLLAGNLYPSAAEQASPELLGGGTADAIASTARFLKEQRKIDRVLPDY RPTVTDRFVRAAIAAR
Sequences:
>Translated_336_residues MILKRILIAASFTAAAASAVHSHAARAETVNVAYQYGADPAKLAQAGAAYEKATGWKINWRRFDSGADVVAALASGDVQL GDVGQSPFAAAVSRGVPIQAVALNAITGVSEALVVRRGAHIDKPADLVGKTIATPYASNCHYALLAALKHWGIDAQRVKI VNLGPTEIVAAWARGVIDAAYTWDPALGRAKASGGKVLVDSAEVGKWGAPTFDLWAVRSDFAQAHPDFVSKFVKVTTQAI ADYRANGKAWTSASRQVAEISRLSGAAAGDIAQLLAGNLYPSAAEQASPELLGGGTADAIASTARFLKEQRKIDRVLPDY RPTVTDRFVRAAIAAR >Mature_336_residues MILKRILIAASFTAAAASAVHSHAARAETVNVAYQYGADPAKLAQAGAAYEKATGWKINWRRFDSGADVVAALASGDVQL GDVGQSPFAAAVSRGVPIQAVALNAITGVSEALVVRRGAHIDKPADLVGKTIATPYASNCHYALLAALKHWGIDAQRVKI VNLGPTEIVAAWARGVIDAAYTWDPALGRAKASGGKVLVDSAEVGKWGAPTFDLWAVRSDFAQAHPDFVSKFVKVTTQAI ADYRANGKAWTSASRQVAEISRLSGAAAGDIAQLLAGNLYPSAAEQASPELLGGGTADAIASTARFLKEQRKIDRVLPDY RPTVTDRFVRAAIAAR
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=323, Percent_Identity=49.2260061919505, Blast_Score=295, Evalue=3e-81, Organism=Escherichia coli, GI87081803, Length=206, Percent_Identity=29.126213592233, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 35226; Mature: 35226
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKRILIAASFTAAAASAVHSHAARAETVNVAYQYGADPAKLAQAGAAYEKATGWKINW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHCCCCEEEE RRFDSGADVVAALASGDVQLGDVGQSPFAAAVSRGVPIQAVALNAITGVSEALVVRRGAH EEECCCHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC IDKPADLVGKTIATPYASNCHYALLAALKHWGIDAQRVKIVNLGPTEIVAAWARGVIDAA CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHHHHH YTWDPALGRAKASGGKVLVDSAEVGKWGAPTFDLWAVRSDFAQAHPDFVSKFVKVTTQAI HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADYRANGKAWTSASRQVAEISRLSGAAAGDIAQLLAGNLYPSAAEQASPELLGGGTADAI HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHH ASTARFLKEQRKIDRVLPDYRPTVTDRFVRAAIAAR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MILKRILIAASFTAAAASAVHSHAARAETVNVAYQYGADPAKLAQAGAAYEKATGWKINW CHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCHHHHCCCCEEEE RRFDSGADVVAALASGDVQLGDVGQSPFAAAVSRGVPIQAVALNAITGVSEALVVRRGAH EEECCCHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC IDKPADLVGKTIATPYASNCHYALLAALKHWGIDAQRVKIVNLGPTEIVAAWARGVIDAA CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHEEEEEECCHHHHHHHHHHHHHHHH YTWDPALGRAKASGGKVLVDSAEVGKWGAPTFDLWAVRSDFAQAHPDFVSKFVKVTTQAI HCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ADYRANGKAWTSASRQVAEISRLSGAAAGDIAQLLAGNLYPSAAEQASPELLGGGTADAI HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHH ASTARFLKEQRKIDRVLPDYRPTVTDRFVRAAIAAR HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]