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The map label for this gene is 126444424

Identifier: 126444424

GI number: 126444424

Start: 1476552

End: 1476881

Strand: Reverse

Name: 126444424

Synonym: BURPS668_A1539

Alternate gene names: NA

Gene position: 1476881-1476552 (Counterclockwise)

Preceding gene: 126445397

Following gene: 126443929

Centisome position: 47.22

GC content: 60.91

Gene sequence:

>330_bases
GTGACATCCAGCAAAATTCAGACGCTGCAGAAGGAGCTCGGTCATCTCAACCTGCTCCTCGAAGAAGCGAAAAAAAAGGA
AAAGGCCGAGGCGCTGGCCGCCATTCGCGAACAGGTGAAGCAGTTCGACATCACGGAAGTCGAACTGCTGAGGGCGGCGG
GGTTCGTGAAGGACAAGCCGAAGAAGCTGCCGGCGAAATACTACGATCCGTCGACGGGTAAATCGTGGACGGGCCGCGGC
GCGTGCCCGAAATGGCTGATCGGCAAGAATCTCGACGACTACCTGATCCGGCCGGCGCCCGAGCCCTGGTGGCCGGGGGA
GAGCGCGTAG

Upstream 100 bases:

>100_bases
CGCGCGCAACCGTCCAGGCCCGAGCAGGCTGCTCAGCAGCAACAGACATCCGCGTGTCCGCCGCAGGGCGCGCAGCGTAC
CGATTGAAGACATAAATCAC

Downstream 100 bases:

>100_bases
CGCGCGCCCGCGGCGGGCGGCGAGACATCGGCCCGACGCCGCGGCCCGCGCGGAGACGACGGCAGCCGGCGTGCCGCGCG
TCGCGTCACGCCGTGTCAGG

Product: H-NS histone family protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; Nucleoid Protein H-NS; H-NS Histone Family Protein

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MTSSKIQTLQKELGHLNLLLEEAKKKEKAEALAAIREQVKQFDITEVELLRAAGFVKDKPKKLPAKYYDPSTGKSWTGRG
ACPKWLIGKNLDDYLIRPAPEPWWPGESA

Sequences:

>Translated_109_residues
MTSSKIQTLQKELGHLNLLLEEAKKKEKAEALAAIREQVKQFDITEVELLRAAGFVKDKPKKLPAKYYDPSTGKSWTGRG
ACPKWLIGKNLDDYLIRPAPEPWWPGESA
>Mature_108_residues
TSSKIQTLQKELGHLNLLLEEAKKKEKAEALAAIREQVKQFDITEVELLRAAGFVKDKPKKLPAKYYDPSTGKSWTGRGA
CPKWLIGKNLDDYLIRPAPEPWWPGESA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12306; Mature: 12175

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSKIQTLQKELGHLNLLLEEAKKKEKAEALAAIREQVKQFDITEVELLRAAGFVKDKP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
KKLPAKYYDPSTGKSWTGRGACPKWLIGKNLDDYLIRPAPEPWWPGESA
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSSKIQTLQKELGHLNLLLEEAKKKEKAEALAAIREQVKQFDITEVELLRAAGFVKDKP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCC
KKLPAKYYDPSTGKSWTGRGACPKWLIGKNLDDYLIRPAPEPWWPGESA
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA