| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444372
Identifier: 126444372
GI number: 126444372
Start: 225337
End: 226104
Strand: Reverse
Name: 126444372
Synonym: BURPS668_A0251
Alternate gene names: NA
Gene position: 226104-225337 (Counterclockwise)
Preceding gene: 126443092
Following gene: 126444901
Centisome position: 7.23
GC content: 64.06
Gene sequence:
>768_bases ATGAAGAAATACCTGATAGAAGATCTCGTCACCTTCGATGCGCATCTGATGACGCTGGCGCATCTGGACCAAACCACGGA ACTCACCACCAACGAATCGGAACTGCTTCAAATGGTGCTCGACGGGATAGCCACCAAGGCCGCCGTCATTGAGCGGGTAT GGGGCAGCAAGGGGTTCGTCGTTACCGACAGCAGCTATCACCAGCTCGTGCGCTCGGTGCGCAACCGCCTCGAGGAACAC GGCATCAGCGGCGCGCTCATCAAGACGCTGCCTCGTCAAGGATTGAGGTTCCTGGGTTCCGCGCAGGCATTGACCGATGC GGCCACGCCCGTCGCCCAGCCGGGCCTCGCCGATCAAGGCGAGCCGGCAGACGAAGCCGCTCTCGCGCTCCTCACGCAGC ATGAGCCGCAATCCGCGCCGCCCGTCGGTCGCGCGCGGAACTGGAGGCGCAGGCTTCGTTTCGTGGAGCGCGCGCTGCTC GCCGGGCTCGTGGTCTGGGTCGGCCTCGTCACCTGGAAGATGATTTCGATCAACGATCGCTTTCCGTGGCTGACCGGGCA TTTCGGCGTCCATACCCACGCTCACGTCACCCCGCGCTCCGCCGGGCTCAAGCTGCTTGCGTCGATCGGCGTACGGCCCG GCCCCGGAGAGCGCGTCTATGAGATATCCCGTAACGGCGACAGATGGCTCGCGATATGCGCGGGAACCCGACATAGCAGC GATGAGCGCTGCACCACCTACTCCACCCGGGATCTGACGACGTCCTGA
Upstream 100 bases:
>100_bases ATCGATCGAACCGCGCGAGCGATTTTCCAACAATCAGACTTTTTCCGCTCCGGGCGGCGCCAGAGGATCGGCGTCGCAAG CGAATGCGTACTGAAACACA
Downstream 100 bases:
>100_bases CGATTTTCGAAGGCTCGCCCTGCCGGGCCAGGACAACCCGCTTTACGGCAAGCGCAGCGCCAACAATTCGCGCACCCGCC TGCGGCGGATGCCCATCAAG
Product: DNA-binding winged-HTH domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKKYLIEDLVTFDAHLMTLAHLDQTTELTTNESELLQMVLDGIATKAAVIERVWGSKGFVVTDSSYHQLVRSVRNRLEEH GISGALIKTLPRQGLRFLGSAQALTDAATPVAQPGLADQGEPADEAALALLTQHEPQSAPPVGRARNWRRRLRFVERALL AGLVVWVGLVTWKMISINDRFPWLTGHFGVHTHAHVTPRSAGLKLLASIGVRPGPGERVYEISRNGDRWLAICAGTRHSS DERCTTYSTRDLTTS
Sequences:
>Translated_255_residues MKKYLIEDLVTFDAHLMTLAHLDQTTELTTNESELLQMVLDGIATKAAVIERVWGSKGFVVTDSSYHQLVRSVRNRLEEH GISGALIKTLPRQGLRFLGSAQALTDAATPVAQPGLADQGEPADEAALALLTQHEPQSAPPVGRARNWRRRLRFVERALL AGLVVWVGLVTWKMISINDRFPWLTGHFGVHTHAHVTPRSAGLKLLASIGVRPGPGERVYEISRNGDRWLAICAGTRHSS DERCTTYSTRDLTTS >Mature_255_residues MKKYLIEDLVTFDAHLMTLAHLDQTTELTTNESELLQMVLDGIATKAAVIERVWGSKGFVVTDSSYHQLVRSVRNRLEEH GISGALIKTLPRQGLRFLGSAQALTDAATPVAQPGLADQGEPADEAALALLTQHEPQSAPPVGRARNWRRRLRFVERALL AGLVVWVGLVTWKMISINDRFPWLTGHFGVHTHAHVTPRSAGLKLLASIGVRPGPGERVYEISRNGDRWLAICAGTRHSS DERCTTYSTRDLTTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28146; Mature: 28146
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYLIEDLVTFDAHLMTLAHLDQTTELTTNESELLQMVLDGIATKAAVIERVWGSKGFV CCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VTDSSYHQLVRSVRNRLEEHGISGALIKTLPRQGLRFLGSAQALTDAATPVAQPGLADQG EECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPADEAALALLTQHEPQSAPPVGRARNWRRRLRFVERALLAGLVVWVGLVTWKMISINDR CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC FPWLTGHFGVHTHAHVTPRSAGLKLLASIGVRPGPGERVYEISRNGDRWLAICAGTRHSS CCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCC DERCTTYSTRDLTTS CCCCEEECCCCCCCC >Mature Secondary Structure MKKYLIEDLVTFDAHLMTLAHLDQTTELTTNESELLQMVLDGIATKAAVIERVWGSKGFV CCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE VTDSSYHQLVRSVRNRLEEHGISGALIKTLPRQGLRFLGSAQALTDAATPVAQPGLADQG EECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPADEAALALLTQHEPQSAPPVGRARNWRRRLRFVERALLAGLVVWVGLVTWKMISINDR CCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCC FPWLTGHFGVHTHAHVTPRSAGLKLLASIGVRPGPGERVYEISRNGDRWLAICAGTRHSS CCCEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCCC DERCTTYSTRDLTTS CCCCEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA