| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126444257
Identifier: 126444257
GI number: 126444257
Start: 1953877
End: 1954377
Strand: Reverse
Name: 126444257
Synonym: BURPS668_A2020
Alternate gene names: NA
Gene position: 1954377-1953877 (Counterclockwise)
Preceding gene: 126444989
Following gene: 126443315
Centisome position: 62.49
GC content: 69.26
Gene sequence:
>501_bases ATGTCGTCCGGCGCATCGTTCGACATATCGATGGACGTATCGATAAGCCTATCCACGGACGTACCGCCGAGCGGCGGCAG ACCGCGAGCGTCGGTCGGCGCGGGCGTCGATCGACGATATCGTTGCGAGCCGTCGCCGCGGCGGTGGTCGCGGCCATTGC GGCGAATCGCGCGCGCCGCCGTCGTGCTTCGCTTGCCGAAGCAGTTCGTTCAATTGTTGCCGAATATCGGCGTCGCTTGC GGAGCTCGGTCGTTCGTTGTCGAGCGAGGCCGGCGCATTCTCCGCGAGCGGTGCGACGAGGCCGCCCGAAAAGCCGGATC GCGGGAAAACGAAGCGCGGCGCGCCGCTAGCGGCGCGGCGTTGACGTTGCGCACGAGGCGGGGCGATGCGCTCCGGTGTT GCGATGCGCGCGGGGGCATGAAGCGGAGACAGGAAGTGGAGGCAGGAAGCGGGGCGGCGCGCGTGGTCGACCTGCGCGGC GAGGCTACGCGAGGCGCGTAG
Upstream 100 bases:
>100_bases TGCCGGTTCGTCGCGCATTGGCGTCGGGAAGCACAATGTCGATCGAATTGCCGACGCGATTTGCCGACGCAAATTGCCGA CGCGGCATGGCGCGGGCGGC
Downstream 100 bases:
>100_bases GGTGACGCGGGACGAGGTAAGGCGAGACGAGAGACGACGGGATAAGGCGCAGATAGCGCGAGGTAGTGCGAGGTAGTGCG AGGCGCGCGGCCTCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSSGASFDISMDVSISLSTDVPPSGGRPRASVGAGVDRRYRCEPSPRRWSRPLRRIARAAVVLRLPKQFVQLLPNIGVAC GARSFVVERGRRILRERCDEAARKAGSRENEARRAASGAALTLRTRRGDALRCCDARGGMKRRQEVEAGSGAARVVDLRG EATRGA
Sequences:
>Translated_166_residues MSSGASFDISMDVSISLSTDVPPSGGRPRASVGAGVDRRYRCEPSPRRWSRPLRRIARAAVVLRLPKQFVQLLPNIGVAC GARSFVVERGRRILRERCDEAARKAGSRENEARRAASGAALTLRTRRGDALRCCDARGGMKRRQEVEAGSGAARVVDLRG EATRGA >Mature_165_residues SSGASFDISMDVSISLSTDVPPSGGRPRASVGAGVDRRYRCEPSPRRWSRPLRRIARAAVVLRLPKQFVQLLPNIGVACG ARSFVVERGRRILRERCDEAARKAGSRENEARRAASGAALTLRTRRGDALRCCDARGGMKRRQEVEAGSGAARVVDLRGE ATRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17988; Mature: 17857
Theoretical pI: Translated: 12.04; Mature: 12.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGASFDISMDVSISLSTDVPPSGGRPRASVGAGVDRRYRCEPSPRRWSRPLRRIARAA CCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VVLRLPKQFVQLLPNIGVACGARSFVVERGRRILRERCDEAARKAGSRENEARRAASGAA HHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE LTLRTRRGDALRCCDARGGMKRRQEVEAGSGAARVVDLRGEATRGA EEEEECCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCC >Mature Secondary Structure SSGASFDISMDVSISLSTDVPPSGGRPRASVGAGVDRRYRCEPSPRRWSRPLRRIARAA CCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH VVLRLPKQFVQLLPNIGVACGARSFVVERGRRILRERCDEAARKAGSRENEARRAASGAA HHHHHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCE LTLRTRRGDALRCCDARGGMKRRQEVEAGSGAARVVDLRGEATRGA EEEEECCCCCEEECCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA