| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is chrB [H]
Identifier: 126444120
GI number: 126444120
Start: 72166
End: 73161
Strand: Reverse
Name: chrB [H]
Synonym: BURPS668_A0085
Alternate gene names: 126444120
Gene position: 73161-72166 (Counterclockwise)
Preceding gene: 126443161
Following gene: 126442944
Centisome position: 2.34
GC content: 67.77
Gene sequence:
>996_bases ATGAGTAATATTCGCTACATGAAAATTGCATCGACTTGGTCACTTCTCGTGCTGACCCTTCCAACGGAAAACGCGACGGC CCGCATGCGGTTCTGGCGCGCGCTCAAGGCAAAGGGCTGCGCCGTGCTGCGCGACGGGGTCTACCTGCTTCCCCATACGG AGGCGCGCGAAGGGATGCTGCGCGAGCTCGCCGACGCGATCGCGGAAAGCGGCGGCGCCGCGCACCTGCTGCGCGTGCCG AGCCTCGACGCATCGCAGGAAGCGGAATTTCGCGCGCTGTTCGATCGCGAGGAGGATTACGCGGGCTTCGTTCGCGATCT CGCGCAAGCTCGCAAAACGCTGGCGAGCCAGTCGGCCGCCGAACTGGCTCGCCTGCTGCGCCGCCTGCGCAAGGATTTCG AAGCCATTCGCGCGATCGATTACTTTCCCGACGACGCGGCCACCCGCGCCGAGCTCGCATGGCAGGACTTCGTCTCTCTC GTCGACACGGTGCTGTCGCCCGGGGAACCCCACGCCGCCGAGCGTGCGATCCGGCGCCTCGCGATCGACGACTACCAGGG GCGCACGTGGGCCACGCGCCAGCGCATGTGGGTCGATCGCGTCGCCAGCGCATGGCTCATTCGCCGTTTCATCGACACGC GCGCGCGCTTCATCTGGCTCGCGTCGCCGAGCGAGTGCCCCGACGGCGCGCTCGGCTTCGATTACGACGGCGCCGCGTTC ACGCATGTCGGCGAGCGCGTGACGTTCGAGGTGCTGCTCGCCAGCTTCGGACTCGACCAGGACCCGGCGCTGCTGCGCCT GGGCACGATCGTGCACGCACTCGACGTCGGCGGGCCCGGCGCCCCCGAGACGGTCGGCTTCGAAGCGGTGATGGCCGGCG CGCGCCGGCGCGCCGAAAACGACGAGCGGCTGCTCGAGCAGATGAGCGACGTGCTCGATTCGCTGTACGCGTACTTCGCA ACGAACGAAACGGACAAAACCGGGAGCCGGTCATGA
Upstream 100 bases:
>100_bases CGCCACGACGAACAGCGGGCGTCCCGTTCGTTCGCCGTATACCGCACGGCCAAGGGAAGACCGCGCCACCTCACAGGATA TCTTGTAGATATCGCGACCA
Downstream 100 bases:
>100_bases CCACCACCGTCACGCCCCATGCGCCGGCCTACTCGATGAGTCAACTGGTCGGGTACATGCTGCGGCTCGGCACGTTCGGC TTCGGCGGCCCGGTCGCGCT
Product: chrB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MSNIRYMKIASTWSLLVLTLPTENATARMRFWRALKAKGCAVLRDGVYLLPHTEAREGMLRELADAIAESGGAAHLLRVP SLDASQEAEFRALFDREEDYAGFVRDLAQARKTLASQSAAELARLLRRLRKDFEAIRAIDYFPDDAATRAELAWQDFVSL VDTVLSPGEPHAAERAIRRLAIDDYQGRTWATRQRMWVDRVASAWLIRRFIDTRARFIWLASPSECPDGALGFDYDGAAF THVGERVTFEVLLASFGLDQDPALLRLGTIVHALDVGGPGAPETVGFEAVMAGARRRAENDERLLEQMSDVLDSLYAYFA TNETDKTGSRS
Sequences:
>Translated_331_residues MSNIRYMKIASTWSLLVLTLPTENATARMRFWRALKAKGCAVLRDGVYLLPHTEAREGMLRELADAIAESGGAAHLLRVP SLDASQEAEFRALFDREEDYAGFVRDLAQARKTLASQSAAELARLLRRLRKDFEAIRAIDYFPDDAATRAELAWQDFVSL VDTVLSPGEPHAAERAIRRLAIDDYQGRTWATRQRMWVDRVASAWLIRRFIDTRARFIWLASPSECPDGALGFDYDGAAF THVGERVTFEVLLASFGLDQDPALLRLGTIVHALDVGGPGAPETVGFEAVMAGARRRAENDERLLEQMSDVLDSLYAYFA TNETDKTGSRS >Mature_330_residues SNIRYMKIASTWSLLVLTLPTENATARMRFWRALKAKGCAVLRDGVYLLPHTEAREGMLRELADAIAESGGAAHLLRVPS LDASQEAEFRALFDREEDYAGFVRDLAQARKTLASQSAAELARLLRRLRKDFEAIRAIDYFPDDAATRAELAWQDFVSLV DTVLSPGEPHAAERAIRRLAIDDYQGRTWATRQRMWVDRVASAWLIRRFIDTRARFIWLASPSECPDGALGFDYDGAAFT HVGERVTFEVLLASFGLDQDPALLRLGTIVHALDVGGPGAPETVGFEAVMAGARRRAENDERLLEQMSDVLDSLYAYFAT NETDKTGSRS
Specific function: Together with ChrA1, this protein reduces chromate accumulation and is essential for chromate resistance, possibly as a regulatory protein [H]
COG id: COG4275
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018634 [H]
Pfam domain/function: PF09828 Chrome_Resist [H]
EC number: NA
Molecular weight: Translated: 36960; Mature: 36829
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIRYMKIASTWSLLVLTLPTENATARMRFWRALKAKGCAVLRDGVYLLPHTEAREGML CCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHH RELADAIAESGGAAHLLRVPSLDASQEAEFRALFDREEDYAGFVRDLAQARKTLASQSAA HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ELARLLRRLRKDFEAIRAIDYFPDDAATRAELAWQDFVSLVDTVLSPGEPHAAERAIRRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AIDDYQGRTWATRQRMWVDRVASAWLIRRFIDTRARFIWLASPSECPDGALGFDYDGAAF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHH THVGERVTFEVLLASFGLDQDPALLRLGTIVHALDVGGPGAPETVGFEAVMAGARRRAEN HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC DERLLEQMSDVLDSLYAYFATNETDKTGSRS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNIRYMKIASTWSLLVLTLPTENATARMRFWRALKAKGCAVLRDGVYLLPHTEAREGML CCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHCCCEEEECCEEEECCCHHHHHHH RELADAIAESGGAAHLLRVPSLDASQEAEFRALFDREEDYAGFVRDLAQARKTLASQSAA HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH ELARLLRRLRKDFEAIRAIDYFPDDAATRAELAWQDFVSLVDTVLSPGEPHAAERAIRRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AIDDYQGRTWATRQRMWVDRVASAWLIRRFIDTRARFIWLASPSECPDGALGFDYDGAAF HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCHH THVGERVTFEVLLASFGLDQDPALLRLGTIVHALDVGGPGAPETVGFEAVMAGARRRAEN HHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC DERLLEQMSDVLDSLYAYFATNETDKTGSRS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]