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The map label for this gene is ydjA [H]

Identifier: 126444008

GI number: 126444008

Start: 727837

End: 728460

Strand: Reverse

Name: ydjA [H]

Synonym: BURPS668_A0762

Alternate gene names: 126444008

Gene position: 728460-727837 (Counterclockwise)

Preceding gene: 126443520

Following gene: 126442752

Centisome position: 23.29

GC content: 75.16

Gene sequence:

>624_bases
ATGAATGCCACTGCCTGCGCGGCGCCCGCCCGCGCCGCCGTTGCCGACGACCCGCGCGGCCTGCTGCGGGAACTGCTGTC
GCGCCGCTCCCGCTGGCCGCTGACCGAACCCGCGCCCGGCCCGCGCGAACTCGACGCCATCTTCGACGCCGCGTTGCGCG
CGCCCGATCACGGCAACCTGCGTCCGTGGCGCTTCGTCGTGATCCGCGGCGCCGCGCGTCACGCATTCGGCGATCTGCTG
GTCGAGCTGGCCGACGCGCGCGCACCCGACGCCCCGCCCGGCTCGCACGCGCACCGCCGCGCGAAGGCGCTCGCCGCGCC
GCTCATCGTCGCGCTCGGCGCGGCGCTGAACCGCGCCTCGAATGTACCCGAGGTCGAGCAGTTGCTCGCCGTCGGCGCGG
CCGCGATGAACATGCTGAACGCGGTCCACCAGCTCGGCTACGGCGGCTTCTGGGCAACGGGCACCGATTCGTACGAGCCG
GCGATGCGCGACGCGCTCGGCTTCGGCGCCGACGAACGGCTCATCGGCTTGCTGTACATCGGCACGCCGTCCGCGCCCGC
GAGCGACGCGCGCCGCCCGGATCGCGCCGCGCACGTGCGCGAATGGCTCGGCCCCGTACGCTGA

Upstream 100 bases:

>100_bases
GCATCGAATCAGCGACATTGATAAATGAGAATCATTTGCATTTAAAGCAAAACTGACCGATGATATCCCTCATGCATCGA
CCGATACCCGAACCTCGACC

Downstream 100 bases:

>100_bases
CGGCCGCGCCGCCCGACACCCACGCGCGGCTCGCCGTTCGCTCGCGCGCCGCATCGAATTCCGGAGGTTCCGCCATGCAT
TTCCCTCACGCCGCCCTGAA

Product: nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MNATACAAPARAAVADDPRGLLRELLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASNVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGTDSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPVR

Sequences:

>Translated_207_residues
MNATACAAPARAAVADDPRGLLRELLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASNVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGTDSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPVR
>Mature_207_residues
MNATACAAPARAAVADDPRGLLRELLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNLRPWRFVVIRGAARHAFGDLL
VELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRASNVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGTDSYEP
AMRDALGFGADERLIGLLYIGTPSAPASDARRPDRAAHVREWLGPVR

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=169, Percent_Identity=37.2781065088757, Blast_Score=110, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 22020; Mature: 22020

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATACAAPARAAVADDPRGLLRELLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNL
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
RPWRFVVIRGAARHAFGDLLVELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRAS
CCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGTDSYEPAMRDALGFGADERLIGLLYI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCEEEEEEE
GTPSAPASDARRPDRAAHVREWLGPVR
CCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MNATACAAPARAAVADDPRGLLRELLSRRSRWPLTEPAPGPRELDAIFDAALRAPDHGNL
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
RPWRFVVIRGAARHAFGDLLVELADARAPDAPPGSHAHRRAKALAAPLIVALGAALNRAS
CCEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
NVPEVEQLLAVGAAAMNMLNAVHQLGYGGFWATGTDSYEPAMRDALGFGADERLIGLLYI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHCCCCCCCEEEEEEE
GTPSAPASDARRPDRAAHVREWLGPVR
CCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]