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The map label for this gene is yhjU [H]

Identifier: 126443978

GI number: 126443978

Start: 2151768

End: 2153324

Strand: Reverse

Name: yhjU [H]

Synonym: BURPS668_A2225

Alternate gene names: 126443978

Gene position: 2153324-2151768 (Counterclockwise)

Preceding gene: 126443249

Following gene: 126445336

Centisome position: 68.85

GC content: 69.62

Gene sequence:

>1557_bases
ATGACGTTCTGGAATCTGTATTTCATTCTGAAGCTCTATCTGTTCGCGGCGGGCCACTTGAAGCCGTTGTGGATCGCGAA
TCTCGGTTTCGCGCTGGCGCTCGCGCTGAGCGCGCCGGCGAGGCGGCGCGGCGTGCGGCTGCTGCGCCACGCGCTCGCGC
TGGCGCTCGCGGTGCCGCTGATGTATCGCGAAGCGGACGTGCCGCCACTCGCGCGGCTCGTCGAAACGCTCGGCGGCCTG
CGCGCGTTCAGCGCCGGCTACTGGATGGAGCTCGTGCCGCGCTTCGTGCCGCCGATGCTCGCATTGGCCGCGCTCGGCGT
CGTGATCGGCTATCTGATCGTCAATCGCTGGCTGCGCGTGGCGACGTTCGTGCTGCTCGCGCTGATCGCGCTGCCGGTGT
GGCAGGCGGGCAGCGCGGCGCTCGCGCGGCTCGACGCGGCTGCCGCGGCCGTGCCCGGGCCGGCCGGAACGGGCCGCGCC
GTGCAGCCGCAGGATCACAACGCGGCGCTCGCCGCGTTCCGCTCGCAGGAATCGCAGCGGCAGGTGACGTTCGGCCGGCC
GAGCGCCGATCCGGCGACGCAGTTCGACGTGATCGTGCTGCATGTGTGCTCGCTGTCGTGGGACGACCTCGACGTCGCGA
GGCTGCGCAATCAGCCGCTGCTCGGCCATTTCGACTATCTGTTCACGAATTTCAGCACGGCGGCGAGCTACAGCGGCCCG
GCCGCGATCCGCGTGCTGCGCGCGAGCTGCGGGCAGGAGGCGCACGCGGACCTGTACAAGCCCGCGCCCGCGCAGTGCCA
TCTGTTCGGGCAACTCGCGGCCGCCGGCTTCGCGCCGCAGACGCTGCTCAACCACGACGGCCACTTCGACAACTTTCTCC
AGTTGATCCGCGAGAACATCGGCGTGCCGAACGCGCCGATGATCCCGAACGCGGACGCGCCCGTCGCGATGCACGCGTTC
GACGGCTCGGCGATCAAGGACGACTACGCGACGCTCGCGAACTGGTACGCGAAACGCGGCGCGAGCCCCGGCCCCGTCGC
GCTGTACTACAACACGATCAGCCTGCACGACGGCAATCAGCTGACGGGCGGCCGGATGTCGAGCCTCGATTCGTACCCGC
TGCGCGCGCGCAAGCTGCTGGACGACTTCGACCGCTTCGCGGATCTCATTGCCGCATCGGGGCGGCGCGCGGTGATCGTG
TTCGTGCCCGAGCACGGCGCGGCGCTGCGCGGCGACGCGAAACAGGTGGCGGGGCTGCGCGAGATTCCGACGCCGCGGAT
CGTGCACGGGCCGGTCGGCGTGCGGCTCGTCGGCTTCAAGGGCGACCACGGCGCGACCACCGTGATCGACGCGCCGGCGA
GCTTCTTCGCGCTCGCGCAACTGCTGGCGAATCTCGTGTCGAACAGCCCGTTCAAGCCGGGCGTGACGCTGTCGCAATAC
GCGGCCGATCTGCCGCAGACGCGAATGATCGGCGAGAACGAGGGCACGGTGACGATGACGACGCCGACGGGCTACGCGGT
GAAGACGCCGGACGGCGTATGGATCGACGAAAAATGA

Upstream 100 bases:

>100_bases
ACGGATGCTGCGGGCCGCGACGAGCGCGGTGCGGGCGCGGCGCGCGGCCGACCGGACGCGTCATTGACGCGCGGATTCAA
CTGATGACGGAGTCGCGTCG

Downstream 100 bases:

>100_bases
CGAACGGGAATCGGAACACGCCGGCGGCGCGCGGCGACGCGCCGCCGCCGGCGCACGACATTGCGGGGCTCGCGCGCCAC
GTGCGCGAGATCGATCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 517

Protein sequence:

>518_residues
MTFWNLYFILKLYLFAAGHLKPLWIANLGFALALALSAPARRRGVRLLRHALALALAVPLMYREADVPPLARLVETLGGL
RAFSAGYWMELVPRFVPPMLALAALGVVIGYLIVNRWLRVATFVLLALIALPVWQAGSAALARLDAAAAAVPGPAGTGRA
VQPQDHNAALAAFRSQESQRQVTFGRPSADPATQFDVIVLHVCSLSWDDLDVARLRNQPLLGHFDYLFTNFSTAASYSGP
AAIRVLRASCGQEAHADLYKPAPAQCHLFGQLAAAGFAPQTLLNHDGHFDNFLQLIRENIGVPNAPMIPNADAPVAMHAF
DGSAIKDDYATLANWYAKRGASPGPVALYYNTISLHDGNQLTGGRMSSLDSYPLRARKLLDDFDRFADLIAASGRRAVIV
FVPEHGAALRGDAKQVAGLREIPTPRIVHGPVGVRLVGFKGDHGATTVIDAPASFFALAQLLANLVSNSPFKPGVTLSQY
AADLPQTRMIGENEGTVTMTTPTGYAVKTPDGVWIDEK

Sequences:

>Translated_518_residues
MTFWNLYFILKLYLFAAGHLKPLWIANLGFALALALSAPARRRGVRLLRHALALALAVPLMYREADVPPLARLVETLGGL
RAFSAGYWMELVPRFVPPMLALAALGVVIGYLIVNRWLRVATFVLLALIALPVWQAGSAALARLDAAAAAVPGPAGTGRA
VQPQDHNAALAAFRSQESQRQVTFGRPSADPATQFDVIVLHVCSLSWDDLDVARLRNQPLLGHFDYLFTNFSTAASYSGP
AAIRVLRASCGQEAHADLYKPAPAQCHLFGQLAAAGFAPQTLLNHDGHFDNFLQLIRENIGVPNAPMIPNADAPVAMHAF
DGSAIKDDYATLANWYAKRGASPGPVALYYNTISLHDGNQLTGGRMSSLDSYPLRARKLLDDFDRFADLIAASGRRAVIV
FVPEHGAALRGDAKQVAGLREIPTPRIVHGPVGVRLVGFKGDHGATTVIDAPASFFALAQLLANLVSNSPFKPGVTLSQY
AADLPQTRMIGENEGTVTMTTPTGYAVKTPDGVWIDEK
>Mature_517_residues
TFWNLYFILKLYLFAAGHLKPLWIANLGFALALALSAPARRRGVRLLRHALALALAVPLMYREADVPPLARLVETLGGLR
AFSAGYWMELVPRFVPPMLALAALGVVIGYLIVNRWLRVATFVLLALIALPVWQAGSAALARLDAAAAAVPGPAGTGRAV
QPQDHNAALAAFRSQESQRQVTFGRPSADPATQFDVIVLHVCSLSWDDLDVARLRNQPLLGHFDYLFTNFSTAASYSGPA
AIRVLRASCGQEAHADLYKPAPAQCHLFGQLAAAGFAPQTLLNHDGHFDNFLQLIRENIGVPNAPMIPNADAPVAMHAFD
GSAIKDDYATLANWYAKRGASPGPVALYYNTISLHDGNQLTGGRMSSLDSYPLRARKLLDDFDRFADLIAASGRRAVIVF
VPEHGAALRGDAKQVAGLREIPTPRIVHGPVGVRLVGFKGDHGATTVIDAPASFFALAQLLANLVSNSPFKPGVTLSQYA
ADLPQTRMIGENEGTVTMTTPTGYAVKTPDGVWIDEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789960, Length=540, Percent_Identity=35.9259259259259, Blast_Score=317, Evalue=2e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017744 [H]

Pfam domain/function: PF11658 DUF3260 [H]

EC number: NA

Molecular weight: Translated: 55720; Mature: 55589

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFWNLYFILKLYLFAAGHLKPLWIANLGFALALALSAPARRRGVRLLRHALALALAVPL
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MYREADVPPLARLVETLGGLRAFSAGYWMELVPRFVPPMLALAALGVVIGYLIVNRWLRV
HHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFVLLALIALPVWQAGSAALARLDAAAAAVPGPAGTGRAVQPQDHNAALAAFRSQESQR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
QVTFGRPSADPATQFDVIVLHVCSLSWDDLDVARLRNQPLLGHFDYLFTNFSTAASYSGP
CEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHCCCCCH
AAIRVLRASCGQEAHADLYKPAPAQCHLFGQLAAAGFAPQTLLNHDGHFDNFLQLIRENI
HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHC
GVPNAPMIPNADAPVAMHAFDGSAIKDDYATLANWYAKRGASPGPVALYYNTISLHDGNQ
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCC
LTGGRMSSLDSYPLRARKLLDDFDRFADLIAASGRRAVIVFVPEHGAALRGDAKQVAGLR
CCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCCHH
EIPTPRIVHGPVGVRLVGFKGDHGATTVIDAPASFFALAQLLANLVSNSPFKPGVTLSQY
CCCCCCEEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AADLPQTRMIGENEGTVTMTTPTGYAVKTPDGVWIDEK
HHCCCCHHCCCCCCCEEEEECCCCEEEECCCCCCCCCC
>Mature Secondary Structure 
TFWNLYFILKLYLFAAGHLKPLWIANLGFALALALSAPARRRGVRLLRHALALALAVPL
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
MYREADVPPLARLVETLGGLRAFSAGYWMELVPRFVPPMLALAALGVVIGYLIVNRWLRV
HHHCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATFVLLALIALPVWQAGSAALARLDAAAAAVPGPAGTGRAVQPQDHNAALAAFRSQESQR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
QVTFGRPSADPATQFDVIVLHVCSLSWDDLDVARLRNQPLLGHFDYLFTNFSTAASYSGP
CEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHCCHHHCCCCCH
AAIRVLRASCGQEAHADLYKPAPAQCHLFGQLAAAGFAPQTLLNHDGHFDNFLQLIRENI
HHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHC
GVPNAPMIPNADAPVAMHAFDGSAIKDDYATLANWYAKRGASPGPVALYYNTISLHDGNQ
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCC
LTGGRMSSLDSYPLRARKLLDDFDRFADLIAASGRRAVIVFVPEHGAALRGDAKQVAGLR
CCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHCCHH
EIPTPRIVHGPVGVRLVGFKGDHGATTVIDAPASFFALAQLLANLVSNSPFKPGVTLSQY
CCCCCCEEECCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHH
AADLPQTRMIGENEGTVTMTTPTGYAVKTPDGVWIDEK
HHCCCCHHCCCCCCCEEEEECCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]