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The map label for this gene is yceH [C]

Identifier: 126443966

GI number: 126443966

Start: 1898493

End: 1899260

Strand: Reverse

Name: yceH [C]

Synonym: BURPS668_A1958

Alternate gene names: 126443966

Gene position: 1899260-1898493 (Counterclockwise)

Preceding gene: 126445437

Following gene: 126442308

Centisome position: 60.73

GC content: 68.62

Gene sequence:

>768_bases
GTGATCGTCCGGCGCGTTCCGGACCCGGTTCTCACCCAGGCACATCCCGCAGCGACATCGCCCATGAATTCCACTCCCGA
CACTTTCCAACGCCCGGCCCTTCGCGAGCTGACGCCGCTCGAGGCGCGCGTGCTCGGCGTATTGATCGAGAAGCAGCACA
CGGTGCCGGACACCTATCCGCTGTCGCTCAACGCGCTGACGGCCGGCTGCAATCAGAAGACCGCGCGTTCGCCGGTGATG
AACGTGTCGGAGGCCGAGGTGCTGACGGCGATCGACGGCCTGAAGCGCCTGAGCCTTGCGTCGGAGGGCAGCAGCAGCCG
CGTGCCGCGTTTCGAGCACAACATGAATCGCGTGCTCGGCATTCCGAGCCAGGCGGCCGCGCTGTTGACGATGCTGCTGC
TGCGCGGTCCGCAGACGGCCGCGGAACTGCGTCTGAACAGCGCGCGGCTGCACGGCTTCGCCGACATCTCGTCGGTCGAG
GCGTTCCTCGACGAACTGGCCGCGCGTACACCGCCGCTCGTCGTCAAGCTGCCGCGCGCGCCGGGCGCGCGCGAGAGCCG
CTGGATGCACCTGATGTGCGGCGACGTCGCGCCGGACGAAGCGCCCGCGCACGGTGCGCATGAGGACGCCGTGCCGCCGT
CGGAGTTCGAGGCACTGAAGGCCGAGCAGAAGGCGTTGACGGCGGAGCTCGCGCAATTGCGCGCGCTCGTCGAATACATG
GCGAACGAACTCGGCATCGACGTCGGCAAGTTGACGCGCGGCGTCTGA

Upstream 100 bases:

>100_bases
CGCATGCCGGGCGGGCCGCCGGCGAGCATGTCGCCGCCGCGCGGTTCCCGGCGGGGATTACCCGAAGCGCCGTGCCCGGC
TATCATTGAACCCTTTCGCC

Downstream 100 bases:

>100_bases
TCTCCGGCGCGCGCGTTCGTGCGAAACGACAAGCGAAACCACAAGCAGTACGGCAACGGGGCGAGCGGCGGCAGGACGGC
GGGTGTCGGCTCGGGCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIVRRVPDPVLTQAHPAATSPMNSTPDTFQRPALRELTPLEARVLGVLIEKQHTVPDTYPLSLNALTAGCNQKTARSPVM
NVSEAEVLTAIDGLKRLSLASEGSSSRVPRFEHNMNRVLGIPSQAAALLTMLLLRGPQTAAELRLNSARLHGFADISSVE
AFLDELAARTPPLVVKLPRAPGARESRWMHLMCGDVAPDEAPAHGAHEDAVPPSEFEALKAEQKALTAELAQLRALVEYM
ANELGIDVGKLTRGV

Sequences:

>Translated_255_residues
MIVRRVPDPVLTQAHPAATSPMNSTPDTFQRPALRELTPLEARVLGVLIEKQHTVPDTYPLSLNALTAGCNQKTARSPVM
NVSEAEVLTAIDGLKRLSLASEGSSSRVPRFEHNMNRVLGIPSQAAALLTMLLLRGPQTAAELRLNSARLHGFADISSVE
AFLDELAARTPPLVVKLPRAPGARESRWMHLMCGDVAPDEAPAHGAHEDAVPPSEFEALKAEQKALTAELAQLRALVEYM
ANELGIDVGKLTRGV
>Mature_255_residues
MIVRRVPDPVLTQAHPAATSPMNSTPDTFQRPALRELTPLEARVLGVLIEKQHTVPDTYPLSLNALTAGCNQKTARSPVM
NVSEAEVLTAIDGLKRLSLASEGSSSRVPRFEHNMNRVLGIPSQAAALLTMLLLRGPQTAAELRLNSARLHGFADISSVE
AFLDELAARTPPLVVKLPRAPGARESRWMHLMCGDVAPDEAPAHGAHEDAVPPSEFEALKAEQKALTAELAQLRALVEYM
ANELGIDVGKLTRGV

Specific function: Unknown

COG id: COG3132

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0502 family [H]

Homologues:

Organism=Escherichia coli, GI1787306, Length=217, Percent_Identity=43.778801843318, Blast_Score=156, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007432
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04337 DUF480 [H]

EC number: NA

Molecular weight: Translated: 27478; Mature: 27478

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVRRVPDPVLTQAHPAATSPMNSTPDTFQRPALRELTPLEARVLGVLIEKQHTVPDTYP
CCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCC
LSLNALTAGCNQKTARSPVMNVSEAEVLTAIDGLKRLSLASEGSSSRVPRFEHNMNRVLG
CCHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
IPSQAAALLTMLLLRGPQTAAELRLNSARLHGFADISSVEAFLDELAARTPPLVVKLPRA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
PGARESRWMHLMCGDVAPDEAPAHGAHEDAVPPSEFEALKAEQKALTAELAQLRALVEYM
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANELGIDVGKLTRGV
HHHHCCCHHHHHCCC
>Mature Secondary Structure
MIVRRVPDPVLTQAHPAATSPMNSTPDTFQRPALRELTPLEARVLGVLIEKQHTVPDTYP
CCCCCCCCHHHHCCCCCCCCCCCCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCCCCCCC
LSLNALTAGCNQKTARSPVMNVSEAEVLTAIDGLKRLSLASEGSSSRVPRFEHNMNRVLG
CCHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
IPSQAAALLTMLLLRGPQTAAELRLNSARLHGFADISSVEAFLDELAARTPPLVVKLPRA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
PGARESRWMHLMCGDVAPDEAPAHGAHEDAVPPSEFEALKAEQKALTAELAQLRALVEYM
CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANELGIDVGKLTRGV
HHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA