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The map label for this gene is ytfQ [C]

Identifier: 126443810

GI number: 126443810

Start: 1454336

End: 1455901

Strand: Reverse

Name: ytfQ [C]

Synonym: BURPS668_A1513

Alternate gene names: 126443810

Gene position: 1455901-1454336 (Counterclockwise)

Preceding gene: 126442898

Following gene: 126444203

Centisome position: 46.55

GC content: 68.14

Gene sequence:

>1566_bases
ATGCAACCGTTTGCGAAACCTCCATCGAAACGCGCCGCGCCGCCGCCGCGCCGAATCATGCGGCGCGGCGGCCTTTCGTA
CGGGTTTTCCTGCATGCCGGCGCGGAATTTCGCCCTCGCGGAACGTTTCCGGGAGGATTTCGTTTCATTCGATGCCGCCC
GGGCGGCGGCATTTTCCGATTGGCCCGCAATCAGCCGCTTTCGATTTAACGGAGCGTCGTCCGGTTTATTTAGCATTGCG
CTGAAGTTTATTTGCGATTGCCCGATTCCGATCGAGACGACACGGCGACGATCGCGGGTTCCCGCCGATATCGGCATCGG
CATCGACGCCGCGAAGCCGCCGGCTCGGCGAGCGCCCGCGCCGGCCGCGTCCGATTCCCGCCGCGCATCTTTGCTTGTGC
GGCCCGCGCATTTGCGGCCATCCCATAACCAAAGCACGAATCGATCGTTCCCTTCGCGGGCGTCGTTGCACAGAATCGTT
CGTTCGCCTCCACGTCCGAACCCAGACCCGCCGATCATGCCACGCCCGCTTCCGTCGCTTGCCCGCCTGTTGTCCATGCT
GTTCGCCGTCGCGCTCGCGATCGGCGCCGCCCCCGCTTGCGCGTCGCCCGCCGCCGGCGCTGCGCCGCCCGGGCCGCGCG
CGGGCCATGCGCCGCTGTCGCTCGCCGGCAAGCGGATCGGCATCACGGCGGCCGGCACCGATCACTACTGGGATCTGCAG
GCGTACCAGGGCGCGGTGGACGAAGTGAAGCGCCTCGGCGGCACGCCGATCGCGCTCGACGCCGGCCGCAACGACAGCCG
CCAGATCGCGCAGATCCAGACGCTGATCGCGCAACAGCCCGATGCGATCATCGAGCAGCTCGGCACCGCATCCGTGCTCG
AGCCGTGGCTCAGGAAAATCCGGCAAGCGGGCATCCCGCTTTTCACGATCGACACCGCGTCGCCGTCGAGCCTGAACGTC
GTCACGTCGGACAATTTCGCGATCGGCTCGCAGCTCGCGCTGAAGCTCGTCAACGATATCCGCGGCGAAGGCAACGTCCT
CGTGTTCAACGGCTTCTACGGCGTGCCCGTGTGCGCGATCCGCTACGACCAGCTGAAAGCCGTGCTGAAGTGGTATCCGA
AGGTGAAGATCATCGAGCCCGAGCTGCGCGACGTGATTCCGAACACGGCGCAGAACGCGTACGCGCAGATCAGCCAGTTG
CTGCAGAAGTATCCGAAAGGCGCGATCTCGGCGATCTGGGCCGCGTGGGACATTCCGCAGGTCGGCGCGACGCAGGCGGT
CGACGCGGCCGGCCGACGCGAGATCCGCACGTACGCGGTGGACGGCAGCCCCGAGGCGGTCGCGCTCGTGAGGAATCCGA
CCTCGAGCGCGGCGGCCGTCGTCGCGCAGCAGCCGGCGCTGATCGGCCGCACCGCCGTGCGCAACGTCGCGCGCTATCTG
GCGGGCGACCGATCGCTGCCCGCGTACACGTTCGTGCCGTCGGTGCTCGTCACGAAGGACGACGCGGGTGTCGCGCGGCC
TGCGCTCGGGCAGACGCCGGCCGCCGCCGGGCTCGCGCGGCGATGA

Upstream 100 bases:

>100_bases
AATCGAGCTTATCACGCTGCCGCCGCGCGCCCGCGCGCCGAATCTAAAAATTAGGTTAATTATTCCGCTATCGAACTGAT
GATTTTCCCGGTTCGATCAA

Downstream 100 bases:

>100_bases
AGGCCGCGCTCACGACGGCCGCGGCATCCGCCGCCGCGGCGCCGGATGCCGCCGGCGCGCCGCTCGCGCTCGACGTGCGG
CGCGTCGTCAAGCGCTTCGG

Product: putative carbohydrate ABC transporter periplasmic sugar-binding protein

Products: NA

Alternate protein names: Ribose ABC Transporter; ABC-Type Sugar Transport System Periplasmic Component; Sugar ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MQPFAKPPSKRAAPPPRRIMRRGGLSYGFSCMPARNFALAERFREDFVSFDAARAAAFSDWPAISRFRFNGASSGLFSIA
LKFICDCPIPIETTRRRSRVPADIGIGIDAAKPPARRAPAPAASDSRRASLLVRPAHLRPSHNQSTNRSFPSRASLHRIV
RSPPRPNPDPPIMPRPLPSLARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQ
AYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKIRQAGIPLFTIDTASPSSLNV
VTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAIRYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQL
LQKYPKGAISAIWAAWDIPQVGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYL
AGDRSLPAYTFVPSVLVTKDDAGVARPALGQTPAAAGLARR

Sequences:

>Translated_521_residues
MQPFAKPPSKRAAPPPRRIMRRGGLSYGFSCMPARNFALAERFREDFVSFDAARAAAFSDWPAISRFRFNGASSGLFSIA
LKFICDCPIPIETTRRRSRVPADIGIGIDAAKPPARRAPAPAASDSRRASLLVRPAHLRPSHNQSTNRSFPSRASLHRIV
RSPPRPNPDPPIMPRPLPSLARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQ
AYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKIRQAGIPLFTIDTASPSSLNV
VTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAIRYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQL
LQKYPKGAISAIWAAWDIPQVGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYL
AGDRSLPAYTFVPSVLVTKDDAGVARPALGQTPAAAGLARR
>Mature_521_residues
MQPFAKPPSKRAAPPPRRIMRRGGLSYGFSCMPARNFALAERFREDFVSFDAARAAAFSDWPAISRFRFNGASSGLFSIA
LKFICDCPIPIETTRRRSRVPADIGIGIDAAKPPARRAPAPAASDSRRASLLVRPAHLRPSHNQSTNRSFPSRASLHRIV
RSPPRPNPDPPIMPRPLPSLARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQ
AYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKIRQAGIPLFTIDTASPSSLNV
VTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAIRYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQL
LQKYPKGAISAIWAAWDIPQVGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYL
AGDRSLPAYTFVPSVLVTKDDAGVARPALGQTPAAAGLARR

Specific function: Unknown

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790674, Length=230, Percent_Identity=26.5217391304348, Blast_Score=65, Evalue=8e-12,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55663; Mature: 55663

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPFAKPPSKRAAPPPRRIMRRGGLSYGFSCMPARNFALAERFREDFVSFDAARAAAFSD
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
WPAISRFRFNGASSGLFSIALKFICDCPIPIETTRRRSRVPADIGIGIDAAKPPARRAPA
CCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PAASDSRRASLLVRPAHLRPSHNQSTNRSFPSRASLHRIVRSPPRPNPDPPIMPRPLPSL
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEHH
AYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKI
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
RQAGIPLFTIDTASPSSLNVVTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAI
HHCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEH
RYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQLLQKYPKGAISAIWAAWDIPQ
HHHHHHHHHHHCCCCEEECHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
VGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYL
CCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
AGDRSLPAYTFVPSVLVTKDDAGVARPALGQTPAAAGLARR
HCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MQPFAKPPSKRAAPPPRRIMRRGGLSYGFSCMPARNFALAERFREDFVSFDAARAAAFSD
CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
WPAISRFRFNGASSGLFSIALKFICDCPIPIETTRRRSRVPADIGIGIDAAKPPARRAPA
CCCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PAASDSRRASLLVRPAHLRPSHNQSTNRSFPSRASLHRIVRSPPRPNPDPPIMPRPLPSL
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ARLLSMLFAVALAIGAAPACASPAAGAAPPGPRAGHAPLSLAGKRIGITAAGTDHYWDLQ
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCEEEHH
AYQGAVDEVKRLGGTPIALDAGRNDSRQIAQIQTLIAQQPDAIIEQLGTASVLEPWLRKI
HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHH
RQAGIPLFTIDTASPSSLNVVTSDNFAIGSQLALKLVNDIRGEGNVLVFNGFYGVPVCAI
HHCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEH
RYDQLKAVLKWYPKVKIIEPELRDVIPNTAQNAYAQISQLLQKYPKGAISAIWAAWDIPQ
HHHHHHHHHHHCCCCEEECHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC
VGATQAVDAAGRREIRTYAVDGSPEAVALVRNPTSSAAAVVAQQPALIGRTAVRNVARYL
CCCHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
AGDRSLPAYTFVPSVLVTKDDAGVARPALGQTPAAAGLARR
HCCCCCCHHHHCCCEEEECCCCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA