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The map label for this gene is 126443802

Identifier: 126443802

GI number: 126443802

Start: 65533

End: 66261

Strand: Reverse

Name: 126443802

Synonym: BURPS668_A0077

Alternate gene names: NA

Gene position: 66261-65533 (Counterclockwise)

Preceding gene: 126444528

Following gene: 126443166

Centisome position: 2.12

GC content: 64.06

Gene sequence:

>729_bases
ATGAAACCGAAAGCGCTCTACCACGGCCACCGATTCCCCGCAGCGATCATCAGCCAGGCGGTCCGCTGGTATTTCCGCTT
CCAGCTGAGCCTACGCGACATTGAGGAGCTGCTATTCGAGCGCGGCGTGATCGTCAGCTACGAGACGATCCGCCGGTGGT
GCGACAAATTCGGTGCGGCCTTCGCCCGGCGGGTTAAGGCTGCGCGACGAAAGCCGGGCCGCACCTGGCATCTAGACGAG
ATGTTCGTGAATCTGCGCGGCGAGCCCTGGCTGCTGTGGCGGGCGGTCGACGAACACGGTGCCGAGCTGGATATCCTGCT
GCAGAAGCGACGCGACAAGGCCGCAGCGAAGCGCTCTTTCCAGCGTGTGCTGCGTTCCTGTCCGGCACCGTGCAACATCG
TCACCGACCAGTTACGCAGCTACCCGGCTGCCAAGGCTGGCATCCCGGAGCTCGCCAACGTCAAGCACGTGTTCGTGAAG
GCTGCCGCCCGCGTGAACAACCGCGCCGAGAACAGCCATCAGCCGACCCGCGAACGCGAGCGACGCATGCGGGGATTTCG
CGGCCCGAAGCGCACTCAGGCTTTCCTCGCGAGCTTCGGGCCGATCCGCCAGCACTTCGCCCTGAAGCGGCATCTGCTGC
GTGCTTCGCTTTATCGCAAACACCTCGCCGTACGCTTCTCGACGTGGCGTGAATTTACCGAGGTCACCCAGAATCCGTCT
GCCGCATGA

Upstream 100 bases:

>100_bases
TCAACGCTGCCCCATGGTTTCGACCAGTTCCTGGCGTCTTTGAGGGACTCGAAGAGCGGGCGCTGTCACGTTGGCGGGTG
TGGTCGCGTAAGATGAGGCG

Downstream 100 bases:

>100_bases
AACATGCAGGTCGCGCCCCCGCCCCTTGTGAACATACTCCGCTAACGTGACAGCGCCCTGGAAGCGCATGGCCATGGCAC
GCGGCTGCCGTTGGCCGGCG

Product: IS6 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKPKALYHGHRFPAAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGAAFARRVKAARRKPGRTWHLDE
MFVNLRGEPWLLWRAVDEHGAELDILLQKRRDKAAAKRSFQRVLRSCPAPCNIVTDQLRSYPAAKAGIPELANVKHVFVK
AAARVNNRAENSHQPTRERERRMRGFRGPKRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWREFTEVTQNPS
AA

Sequences:

>Translated_242_residues
MKPKALYHGHRFPAAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGAAFARRVKAARRKPGRTWHLDE
MFVNLRGEPWLLWRAVDEHGAELDILLQKRRDKAAAKRSFQRVLRSCPAPCNIVTDQLRSYPAAKAGIPELANVKHVFVK
AAARVNNRAENSHQPTRERERRMRGFRGPKRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWREFTEVTQNPS
AA
>Mature_242_residues
MKPKALYHGHRFPAAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGAAFARRVKAARRKPGRTWHLDE
MFVNLRGEPWLLWRAVDEHGAELDILLQKRRDKAAAKRSFQRVLRSCPAPCNIVTDQLRSYPAAKAGIPELANVKHVFVK
AAARVNNRAENSHQPTRERERRMRGFRGPKRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWREFTEVTQNPS
AA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3316

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 28340; Mature: 28340

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKALYHGHRFPAAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH
FARRVKAARRKPGRTWHLDEMFVNLRGEPWLLWRAVDEHGAELDILLQKRRDKAAAKRSF
HHHHHHHHHCCCCCEEEHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHH
QRVLRSCPAPCNIVTDQLRSYPAAKAGIPELANVKHVFVKAAARVNNRAENSHQPTRERE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RRMRGFRGPKRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWREFTEVTQNPS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AA
CC
>Mature Secondary Structure
MKPKALYHGHRFPAAIISQAVRWYFRFQLSLRDIEELLFERGVIVSYETIRRWCDKFGAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHH
FARRVKAARRKPGRTWHLDEMFVNLRGEPWLLWRAVDEHGAELDILLQKRRDKAAAKRSF
HHHHHHHHHCCCCCEEEHHHHHHHCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHHH
QRVLRSCPAPCNIVTDQLRSYPAAKAGIPELANVKHVFVKAAARVNNRAENSHQPTRERE
HHHHHHCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RRMRGFRGPKRTQAFLASFGPIRQHFALKRHLLRASLYRKHLAVRFSTWREFTEVTQNPS
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2548057; 2365064 [H]