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The map label for this gene is 126443774

Identifier: 126443774

GI number: 126443774

Start: 1229442

End: 1230530

Strand: Reverse

Name: 126443774

Synonym: BURPS668_A1303

Alternate gene names: NA

Gene position: 1230530-1229442 (Counterclockwise)

Preceding gene: 126444898

Following gene: 126442613

Centisome position: 39.35

GC content: 66.3

Gene sequence:

>1089_bases
ATGGTCAAGCATGCGGCAGCAACATTACTCGGCGCGCTCGCCGCCGCCGGCGCGTGGGCGCAGAGCAGCGTCACGCTGTA
CGGCAGCCTCGACGCCGGCGTCGCGTACGTGAACAACGTCGGCGGCGGCGCAAAGTGGTCGATGATTCAGGGCAACACGC
AGCCCGATCGATGGGGGCTGAAGGGCGTCGAGGATCTGGGCGGCGGTCTGAAGGCGATCTTCCAGCTCGAAAACGGCTTC
TATACGAACAACGGCCAGATGGCGGCGGCGGGCACGATGTGGAACCGTCAGGCGTTCGTCGGCCTGAATTCCGACCGGCT
CGGCGCGCTGACGCTCGGCCATCAGACGCCGTTCAACTTCGACTGGCTCGACCCGCTGTCGAGCGCATTCCTCGCGCAGA
GCTGGTATGCGTTCCATCCCGGCAACCTCGACCAGCTCGCGGACACCAGCACCGTGCCGTTCAACAACTCGGTCAAGTAC
CGGTCACCCGTCTTTGCGGGCTTCACGGTGGGCGCGATGCTCGGCTTCGGCAACACGACGAACTTCTCGACCGGCCGCAC
GATGAGCTTCGGCGTGAACTACGCGAACGGCCCGTTCAAGGCGGCCGCCGTCTATTCGAACGAGCACGACCAGGCGTTCC
CGATGGCGACCGTCGGCGGCATCGCCGGGCCGGGCGGCACGTTCCAGGGCATGCCCGTCGCGAGCTATGTCGCGAAGAAG
GCGCAGAACATGGGCGCGGGCCTGTCGTACCGCTTCGGCCCGCTGCTCGTGCACGGCCTTTACACGCGCGTGAAACTGCA
GGCGAACGGCCACTCGGATACGTTCCAGAGCTACGACGCCGGCGCGAACTACCAGAGCTCGCCGTTCAACGTGATCGCGG
GCGGCGCGGCGACTTCGACGCTCGCCGGCCGCCGCTGGAGCCAGTTCGAGCTCGGCGACACGTATTCGCTGTCCAAGCGC
ACGCAGCTCTACGTGAACGTGCTGTACGAGCACGCGAGCGGCAACGCGAAGGCCGCGTTCTTCACGGCGGGCGCGTCGAG
CACGGCGAATCAGGTGATTGTCCTGACGGGGATTCACCACTCGTTCTGA

Upstream 100 bases:

>100_bases
ACAAAAGAAAGCCAAAAACTCAGCCGTGGGAACGCGCGTGGCCGATCGTTTCGCGCGCGGCCACCGCCCGCGTCATTTGG
AGCAAAGGTCAGGAGATCAG

Downstream 100 bases:

>100_bases
GCGCGGCGCATCGTTTCGCACACGCGCGGCGGTGGCGACGGCGCGTGCCGAGCGGCGCTCGCAAGCGACGTGGCGTTTCT
TCGGCGCGCATCGCGGCGAT

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MVKHAAATLLGALAAAGAWAQSSVTLYGSLDAGVAYVNNVGGGAKWSMIQGNTQPDRWGLKGVEDLGGGLKAIFQLENGF
YTNNGQMAAAGTMWNRQAFVGLNSDRLGALTLGHQTPFNFDWLDPLSSAFLAQSWYAFHPGNLDQLADTSTVPFNNSVKY
RSPVFAGFTVGAMLGFGNTTNFSTGRTMSFGVNYANGPFKAAAVYSNEHDQAFPMATVGGIAGPGGTFQGMPVASYVAKK
AQNMGAGLSYRFGPLLVHGLYTRVKLQANGHSDTFQSYDAGANYQSSPFNVIAGGAATSTLAGRRWSQFELGDTYSLSKR
TQLYVNVLYEHASGNAKAAFFTAGASSTANQVIVLTGIHHSF

Sequences:

>Translated_362_residues
MVKHAAATLLGALAAAGAWAQSSVTLYGSLDAGVAYVNNVGGGAKWSMIQGNTQPDRWGLKGVEDLGGGLKAIFQLENGF
YTNNGQMAAAGTMWNRQAFVGLNSDRLGALTLGHQTPFNFDWLDPLSSAFLAQSWYAFHPGNLDQLADTSTVPFNNSVKY
RSPVFAGFTVGAMLGFGNTTNFSTGRTMSFGVNYANGPFKAAAVYSNEHDQAFPMATVGGIAGPGGTFQGMPVASYVAKK
AQNMGAGLSYRFGPLLVHGLYTRVKLQANGHSDTFQSYDAGANYQSSPFNVIAGGAATSTLAGRRWSQFELGDTYSLSKR
TQLYVNVLYEHASGNAKAAFFTAGASSTANQVIVLTGIHHSF
>Mature_362_residues
MVKHAAATLLGALAAAGAWAQSSVTLYGSLDAGVAYVNNVGGGAKWSMIQGNTQPDRWGLKGVEDLGGGLKAIFQLENGF
YTNNGQMAAAGTMWNRQAFVGLNSDRLGALTLGHQTPFNFDWLDPLSSAFLAQSWYAFHPGNLDQLADTSTVPFNNSVKY
RSPVFAGFTVGAMLGFGNTTNFSTGRTMSFGVNYANGPFKAAAVYSNEHDQAFPMATVGGIAGPGGTFQGMPVASYVAKK
AQNMGAGLSYRFGPLLVHGLYTRVKLQANGHSDTFQSYDAGANYQSSPFNVIAGGAATSTLAGRRWSQFELGDTYSLSKR
TQLYVNVLYEHASGNAKAAFFTAGASSTANQVIVLTGIHHSF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 38205; Mature: 38205

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHAAATLLGALAAAGAWAQSSVTLYGSLDAGVAYVNNVGGGAKWSMIQGNTQPDRWGL
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCC
KGVEDLGGGLKAIFQLENGFYTNNGQMAAAGTMWNRQAFVGLNSDRLGALTLGHQTPFNF
CCHHHHCCCEEEEEEECCCEEECCCCEEEEECEECCEEEEECCCCCCEEEEECCCCCCCC
DWLDPLSSAFLAQSWYAFHPGNLDQLADTSTVPFNNSVKYRSPVFAGFTVGAMLGFGNTT
CHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHEECCCCC
NFSTGRTMSFGVNYANGPFKAAAVYSNEHDQAFPMATVGGIAGPGGTFQGMPVASYVAKK
CCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH
AQNMGAGLSYRFGPLLVHGLYTRVKLQANGHSDTFQSYDAGANYQSSPFNVIAGGAATST
HHHCCCCCCCCHHHHHHEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCEEEECCCHHHH
LAGRRWSQFELGDTYSLSKRTQLYVNVLYEHASGNAKAAFFTAGASSTANQVIVLTGIHH
HCCCCCCEEECCCCCCCCCHHEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCC
SF
CC
>Mature Secondary Structure
MVKHAAATLLGALAAAGAWAQSSVTLYGSLDAGVAYVNNVGGGAKWSMIQGNTQPDRWGL
CCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCC
KGVEDLGGGLKAIFQLENGFYTNNGQMAAAGTMWNRQAFVGLNSDRLGALTLGHQTPFNF
CCHHHHCCCEEEEEEECCCEEECCCCEEEEECEECCEEEEECCCCCCEEEEECCCCCCCC
DWLDPLSSAFLAQSWYAFHPGNLDQLADTSTVPFNNSVKYRSPVFAGFTVGAMLGFGNTT
CHHHHHHHHHHHHCCEEECCCCHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHEECCCCC
NFSTGRTMSFGVNYANGPFKAAAVYSNEHDQAFPMATVGGIAGPGGTFQGMPVASYVAKK
CCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHH
AQNMGAGLSYRFGPLLVHGLYTRVKLQANGHSDTFQSYDAGANYQSSPFNVIAGGAATST
HHHCCCCCCCCHHHHHHEEEEEEEEEEECCCCCHHHCCCCCCCCCCCCCEEEECCCHHHH
LAGRRWSQFELGDTYSLSKRTQLYVNVLYEHASGNAKAAFFTAGASSTANQVIVLTGIHH
HCCCCCCEEECCCCCCCCCHHEEEEEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCC
SF
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]