| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is bcsB [H]
Identifier: 126443746
GI number: 126443746
Start: 2165377
End: 2167824
Strand: Reverse
Name: bcsB [H]
Synonym: BURPS668_A2232
Alternate gene names: 126443746
Gene position: 2167824-2165377 (Counterclockwise)
Preceding gene: 126444618
Following gene: 126443038
Centisome position: 69.32
GC content: 72.47
Gene sequence:
>2448_bases GTGCCGGCCGCGCGAAAGCGAAGCCGGTTGCGCATCGGTTTCGCGGCGCCGATGAAGCCGATTGCAACGTTTGCGCGCGC ATTTGCGATGGCTTGCGCGCTCCTTTGTCCGATCGCGTCGTGGGCGGCGCTTCAGTCGGCACCTCGGCCGGCGTCTCAGC CCGCGCTTCAGCCCGCGTCCCGGCCGACGCCTGCGCCGGCGCTTCAGCCGCCGCGCGCGCGGCCTCGCGCTCCGCGCTCC GCCTCGCTCGCCGCCGGCGCGTCCGCGCCGCTCCCGGCGTCCGCGCCGCTCGTCATGCCGCTCGCCGCGCCGAAGCCGTC CGGCCTCGCCGGCGCGGCGATCCACGTGCCGTTCGCGACGCTCGGCGCATACGAGCCGCTGCGCCTGCGCGGCAGCGACA CCGCGCGCACCGTCAACGTCGGCGTGCGGCTCGACCGGATGGTCACGGCCGCGCGGCTGCGGCTCACGTATACGTATTCG CCGTCGCTCGTGTTTCCGGTGTCGCATCTGAAAGTGTCGATCAACGGCGAGGCGGTCGCGACGCTGCCGTTCGATAGCGA GCACGCGGGGCGCGCGGTGACGCAGGAGATCCCGCTCGATGCGCGCTATTTCACCGATTTCAACCAGATCGAGCTGCGCC TCATCGCGCACTACACGCTCGATCATTGCGAAGACCCGGAGCACTCGGCGCTTTGGGCCGACGTGAGCCCGACGAGCGAG CTGATCTTCGACGAGGCCTCGGTGCGGCTGCCGAACGATCTCGCGCTGCTGCCCGCGCCGTTCTTCGATCGCCGCGACAA CAGCCGGCTGCGGCTGCCGTTCGTGCTGCCCGCGACGCCCGATGACGCGACGCTGCGCAGCGCGGGCGTGCTCGCGTCGT GGTTCGGCGCGCTCGCCGATTACCGGCAGGCGCGCTTTCCGGTGTCGTCGGCGCTGCCCGCGAACGATCACGCGGTCGTC GTCGGCACGGCGGCTCGATTGCCGGCATCGCTCGCGCTGCCGCCGATCGACGGGCCGATGCTCGTCGTCACCGACAATCC CGCCGCGCCCGACAAGAAGCTGCTGGTCGTCACGGGCCGCAGCGCGGCCGACGTCGACGCCGCGACGAACGCGCTCGTGC TCGGCAACGCCGCGCTGTCCGGCCCGTGGGCGCGCGTGTCGCGCATCGACATCGGCGCGCCGCGCAAGCCGTACGACGCG CCGCGCTGGGTGCCGGTGGACCGGCCGGTGGCGTTGCGCGAGCTCGTCGACAGTCCGGCCGACCTGCAAGTGCGCGGCAG CGCGCCCGATCCGATCCGCCTGAACCTGCGCGTGCCGGCCGATCTGCATTCGTGGGGCGGCTCGGGCGTGCCGCTCGCGC TGCACTATCGCTACACCGCGCCCACCGTGCGCAGCGATTCGATGCTCGCCGTCGAGATCAACGATCAGCTCGTGCAGTCG TACCGGCTCTCGCCGCGCAGCCAGGACGCGCGCGGGCGCATGCAGTTGCCGCTGCTGTCCGGCGCGGACAGCCGCGCGAC GAACGATGTCGACATTCCGGCGTTCCGCGTCGGCAGCGCGAACCAGCTGCAACTGCGCTTCACGCTCGATTCGGAGAAGA CCGGGCTTTGCACGGGGGTCGCGAGCGAGCCGCAGCGCGCGGCGATCGATCCCGATTCGACGATCGATTTCTCGCGCTTC ATTCATTACGCGATGCTGCCGAACCTCGCGTATTTCGCGAACAGCGGCTTTCCGTTCACGCGCTACGCGGATCTTTCGCA GACCGCCGTCGTGCTGCCGCCGCGGCCGTCGCCCGCCGAGCAGGAAGCGTATCTGACGATGCTCGGCCACATGGGGCAGT GGACGGGTTTTCCGGCGCTGCGCGTGCGGCTCGCGCGGGCGGCCGACGCGCCGGCGATCGCGGATAAGGATCTGCTCGTG ATCGACGGCGCGCCGCCTTATGCGCAGCTCGCGAACTGGCGCGACGCGCTGCCCGTCGCGATCGGCGAGGCAACGGCCGG CGGCGGCTTCTCGCGCGCGGCGTTCTCGGTGAAGGAGCGCTGGCACGACGACGCGCGCTCGCCGGCCGGCGGCGCGCGCT TCGAGCAGAGCGGCACGCTCGCCGCGCTGTTCGGCTTCGAGCGGCCCGGCGGCGACGGGCGCAGCGTCGTCGCGCTCACG GCCACCGACGCGCGGCATCTCGGCGATCTGCTCGACGTGTTCGAAAAGCCCGGCCTCGTCGCGCAACTGCAGGGCGACGT CGCGCTCGTGCGGGCGGGCGCGGTCGAGAGCCTGCGCGTCGGCGAGCCCTATCTCGTCGGCTACGTGCCGTGGTATGCGC GCGTGTGGACGGCGGTCGCGAGGCATCCGATGCTGCTCGGGCTGCTCGGGGCGGCGGCCGGGCTGCTGCTCGCGCTCGGC GCGTTCGGCGCGTTGCAGCGGATCGCCGCGCGGCGGCGAGGGCTCTGA
Upstream 100 bases:
>100_bases GCGCGCGACTCGATTTCGAGACAGCCAGCAGGCCAATCCAATGTTCGCCGATAACAGGCCAGATGTTTTGCGGGGAAAAA ACGGACATCGACGCGCGACC
Downstream 100 bases:
>100_bases CGCGATGGCGCGGCAAGCGGGGCGAGACGAAGGCGTCGGGCGCATCGGGCGTGAAGCGGGCGACGCGCGCGAGGCGGCCG GGGCGGGCGAGGCGTGCGGG
Product: cellulose synthase regulator protein
Products: NA
Alternate protein names: Cellulose synthase regulatory subunit [H]
Number of amino acids: Translated: 815; Mature: 814
Protein sequence:
>815_residues MPAARKRSRLRIGFAAPMKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRS ASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYS PSLVFPVSHLKVSINGEAVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSE LIFDEASVRLPNDLALLPAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVV VGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDA PRWVPVDRPVALRELVDSPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQS YRLSPRSQDARGRMQLPLLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTGVASEPQRAAIDPDSTIDFSRF IHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLV IDGAPPYAQLANWRDALPVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALT ATDARHLGDLLDVFEKPGLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALG AFGALQRIAARRRGL
Sequences:
>Translated_815_residues MPAARKRSRLRIGFAAPMKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRS ASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYS PSLVFPVSHLKVSINGEAVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSE LIFDEASVRLPNDLALLPAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVV VGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDA PRWVPVDRPVALRELVDSPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQS YRLSPRSQDARGRMQLPLLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTGVASEPQRAAIDPDSTIDFSRF IHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLV IDGAPPYAQLANWRDALPVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALT ATDARHLGDLLDVFEKPGLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALG AFGALQRIAARRRGL >Mature_814_residues PAARKRSRLRIGFAAPMKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPASRPTPAPALQPPRARPRAPRSA SLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFATLGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSP SLVFPVSHLKVSINGEAVATLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSEL IFDEASVRLPNDLALLPAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALADYRQARFPVSSALPANDHAVVV GTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGRSAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAP RWVPVDRPVALRELVDSPADLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQSY RLSPRSQDARGRMQLPLLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTGVASEPQRAAIDPDSTIDFSRFI HYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAEQEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVI DGAPPYAQLANWRDALPVAIGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALTA TDARHLGDLLDVFEKPGLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVARHPMLLGLLGAAAGLLLALGA FGALQRIAARRRGL
Specific function: Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsB/BcsB family [H]
Homologues:
Organism=Escherichia coli, GI1789952, Length=778, Percent_Identity=33.9331619537275, Blast_Score=421, Evalue=1e-119,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003920 - InterPro: IPR018513 [H]
Pfam domain/function: PF03170 BcsB [H]
EC number: NA
Molecular weight: Translated: 86900; Mature: 86769
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAARKRSRLRIGFAAPMKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPAS CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPTPAPALQPPRARPRAPRSASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHH LGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGEAVA HCCCCCEEECCCCCCEEEEECEEEHHHEEEEEEEEEEEECCCEEEEEEEEEEEECCCEEE TLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSE EECCCCCCCCCCHHHCCCCCCCEECCCCCEEEEEEEEEHHHCCCCCCCCEEEECCCCCHH LIFDEASVRLPNDLALLPAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALAD HEECCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH YRQARFPVSSALPANDHAVVVGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGR HHHHCCCHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC SAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVDSPA CCCCCHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCC DLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQS CEEEECCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHH YRLSPRSQDARGRMQLPLLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTGV HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEECC ASEPQRAAIDPDSTIDFSRFIHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAE CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEECCCCCCCH QEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDALPVA HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEE IGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALT ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEE ATDARHLGDLLDVFEKPGLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVA ECCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEECCCCEEEEECHHHHHHHHHHH RHPMLLGLLGAAAGLLLALGAFGALQRIAARRRGL HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PAARKRSRLRIGFAAPMKPIATFARAFAMACALLCPIASWAALQSAPRPASQPALQPAS CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RPTPAPALQPPRARPRAPRSASLAAGASAPLPASAPLVMPLAAPKPSGLAGAAIHVPFAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCHHH LGAYEPLRLRGSDTARTVNVGVRLDRMVTAARLRLTYTYSPSLVFPVSHLKVSINGEAVA HCCCCCEEECCCCCCEEEEECEEEHHHEEEEEEEEEEEECCCEEEEEEEEEEEECCCEEE TLPFDSEHAGRAVTQEIPLDARYFTDFNQIELRLIAHYTLDHCEDPEHSALWADVSPTSE EECCCCCCCCCCHHHCCCCCCCEECCCCCEEEEEEEEEHHHCCCCCCCCEEEECCCCCHH LIFDEASVRLPNDLALLPAPFFDRRDNSRLRLPFVLPATPDDATLRSAGVLASWFGALAD HEECCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH YRQARFPVSSALPANDHAVVVGTAARLPASLALPPIDGPMLVVTDNPAAPDKKLLVVTGR HHHHCCCHHHCCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECC SAADVDAATNALVLGNAALSGPWARVSRIDIGAPRKPYDAPRWVPVDRPVALRELVDSPA CCCCCHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHHHHCCCC DLQVRGSAPDPIRLNLRVPADLHSWGGSGVPLALHYRYTAPTVRSDSMLAVEINDQLVQS CEEEECCCCCCEEEEEECCCHHHHCCCCCCEEEEEEEECCCCCCCCCEEEEECCHHHHHH YRLSPRSQDARGRMQLPLLSGADSRATNDVDIPAFRVGSANQLQLRFTLDSEKTGLCTGV HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCEEECC ASEPQRAAIDPDSTIDFSRFIHYAMLPNLAYFANSGFPFTRYADLSQTAVVLPPRPSPAE CCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCCCEEEECCCCCCEEEECCCCCCCH QEAYLTMLGHMGQWTGFPALRVRLARAADAPAIADKDLLVIDGAPPYAQLANWRDALPVA HHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCEE IGEATAGGGFSRAAFSVKERWHDDARSPAGGARFEQSGTLAALFGFERPGGDGRSVVALT ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEE ATDARHLGDLLDVFEKPGLVAQLQGDVALVRAGAVESLRVGEPYLVGYVPWYARVWTAVA ECCHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCEEECCCCEEEEECHHHHHHHHHHH RHPMLLGLLGAAAGLLLALGAFGALQRIAARRRGL HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]