| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is fdoG [H]
Identifier: 126443726
GI number: 126443726
Start: 2318501
End: 2320969
Strand: Reverse
Name: fdoG [H]
Synonym: BURPS668_A2396
Alternate gene names: 126443726
Gene position: 2320969-2318501 (Counterclockwise)
Preceding gene: 126442720
Following gene: 126444663
Centisome position: 74.21
GC content: 65.25
Gene sequence:
>2469_bases GTGGCAGGTCTTGCCCCGACGTTTGGCCGTGGCGCGATGACGAACCATTGGGTCGACATCAAGAACGCGGACGTTATTCT CGTGATGGGCGGCAATGCCGCTGAGGCCCATCCGTGCGGTTTCAAGTGGGTCACCGAAGCGAAGGCGCATCGCAACGCGC GCCTCGTCGTCGTCGATCCGCGCTTCACGCGCACCGCATCGGTCGCCGATTATTACGCGCCGATTCGCACCGGCACGGAC ATCGCGTTCCTCGGCGGGGTGATCCATTACCTGCTGACGAACGACAAGATCCAGCACGAGTACGTCAAGCATTACACGGA TTTCTCGTTCATCGTTCGCGAGGATTTCGCGTTCGACGACGGCATCTATTCCGGCTACGACGCGGACAAGCACGCGTACC CGGACAAGTCGACGTGGGATTACGAGCGCGGCGACGACGGCTTCGTGAAGGTCGACGAAACGCTCGCGCACCCGCGCTGC GTGTACAACCTGCTCAAGCAGCACTACGCGCGCTACACGCCGGAGATGGTCGAGAAGATCTGCGGCACGCCGAAGGACAA GTTCCTGAAGGTATGCGAGATGCTCGCGACGACGGCCGTGCCCGGCCGCGCCGGCACGGTGCTGTACGCGCTCGGCTGGA CGCACCACTCGGTCGGCGCGCAGATGATCCGCACGGGCGCGATGGTGCAGTTGCTGCTCGGCAACATCGGCATCGCGGGC GGCGGGATGAACGCGCTGCGCGGGCACTCGAACATCCAGGGGTTGACCGACCTCGGGCTGATGTCGAACCTGCTGCCGGG TTACATGACGCTGCCGATGCAGGCCGAGCAGGATTTCGACGCCTACATCCAGAAGCGCGCGCAGCAGCCGCTGCGGCCCA ACCAGCTGAGCTACTGGAAGAACTACCGCGCGTTCCACGTGAGCTTCATGAAGGCGTGGTGGGGCGACGCGGCGAGCGCC GAGAACAACTGGGGCTACGATTACCTGCCGAAGCTCGACAAGCAGTACGACCTGCTGCAGACGATCGAGCTGATGCACGC GGGCAAGATGAACGGCTACATCTGCCAGGGCTTCAACCCGCTCGCGGCGGCGCCGTCCAAGCGCAAGACGTCCGAGGCGC TCGCGAAGCTGAAGTGGCTCGTGATCATGGATCCGCTCGCCACCGAGACGTCGGAGTTCTGGAAGAACCACGGCGAGTTC AACGATGTCGATTCGTCGAAGATCCAGACCGAGGTGTTCCGGCTGCCGACGTCGTGCTTCGCCGAGGAGCGCGGCTCGCT CGTGAACTCCGGCCGCGTGCTGCAGTGGCACTGGCAGGGCGCGGAGCCGCCGGGCCAGGCGAAGAGCGACCTCGAGATCA TGTCGGGGATCTTCCTGCGCATGCGCGACATGTACCGCAAGGACGGCGGCAAGTATCCCGACCCGATCGTCAACCTGAGC TGGCCGTACGCGAACCCGGAAAGCCCGACGCCCGAAGAGCTCGCGATGGAGTTCAACGGCCGCGCGCTCGCGGATCTGCC TGATCCGAAAGACCCGACGAAGACGCTCGTGAAGAAGGGCGAGCAGCTCGCCGGCTTCGCGCAGTTGAAGGACGACGGCA CGACCGCGAGCGGCTGCTGGATCTTCTGCGGCGCGTGGACGCAAGCGGGCAACCAGATGGCGCGGCGCGACAACGCGGAC CCGACGGGCATCGGCCAGACGCTGAACTGGGCGTGGGCGTGGCCGGCGAACCGGCGGATCCTGTACAACCGCGCGTCGTG CGACGTGAACGGCAAGCCGTTCGATCCGAGCCGCAAGCTGATCGGCTGGAACGGCAAGACGTGGACGGGCGCGGACGTTC CCGACTACAAGCTCGACGAGCCGCCCGAGACCGGCATGGGCCCGTTCATCATGAACCCGGAGGGCGTCGCACGCTTTTTC GCGCGCGCCGGGATGAACGAAGGCCCGTTCCCCGAGCACTACGAGCCGTTCGAGACGCCGCTCGCCGCGAACCCGCTGCA TCCGGGCAACCCGCGCGCGCTGAACAACCCGGCCGCCCGCGTGTTCCCGGACGATCGCGCGTCGTTCGGCAAGGTCGACC AGTTCCCGCATGTCGCGACGACCTATCGCCTGACCGAGCACTTCCATTACTGGACGAAGCATGCGCGGCTGAACGCGATC GTCCAGCCGCAGCAGTTCGTCGAGATCGGCGAGGATCTCGCGAAGGAGATCGGCGTCGCGCACGGCGAGCAAGTGAAGGT GTCGTCCAACCGCGGGCACATCGTCGCGGTCGCGCTCGTCACGAAGCGCATCAAGCCGCTCATGGTCGACGGCAGGAAGG TGCAGACGGTCGGCGTGCCGTTGCACTGGGGCTTCAAGGGATTGACGAAGCCCGGCTATCTCGCGAACACCCTGACTCCG TCCGTCGGCGACGGCAACTCGCAGACACCGGAATTCAAATCGTTCCTGGTAAAAGTGGAAAAGGCGTAA
Upstream 100 bases:
>100_bases GGCGGGCAGCAACGAGGTCGGCTATCTGACGCACAAGACCGTGCGCAGCATGGGGATGCTCGCGTTCGACAACCAGGCTC GTGTCTGACATGGCCCGACG
Downstream 100 bases:
>100_bases GGGGAAAGAGATGGCATTGCAATCGCTCGATATCAAGCGCGTCTCGGCCACCACGACGCCTCCTCCCTCCGCGCGCGAGC CGGTGACGGGCAGCGTCGCG
Product: formate dehydrogenase-O, major subunit, selenocysteine-containing
Products: NA
Alternate protein names: Aerobic formate dehydrogenase major subunit; FDH-Z subunit alpha; Formate dehydrogenase-O subunit alpha [H]
Number of amino acids: Translated: 822; Mature: 821
Protein sequence:
>822_residues MAGLAPTFGRGAMTNHWVDIKNADVILVMGGNAAEAHPCGFKWVTEAKAHRNARLVVVDPRFTRTASVADYYAPIRTGTD IAFLGGVIHYLLTNDKIQHEYVKHYTDFSFIVREDFAFDDGIYSGYDADKHAYPDKSTWDYERGDDGFVKVDETLAHPRC VYNLLKQHYARYTPEMVEKICGTPKDKFLKVCEMLATTAVPGRAGTVLYALGWTHHSVGAQMIRTGAMVQLLLGNIGIAG GGMNALRGHSNIQGLTDLGLMSNLLPGYMTLPMQAEQDFDAYIQKRAQQPLRPNQLSYWKNYRAFHVSFMKAWWGDAASA ENNWGYDYLPKLDKQYDLLQTIELMHAGKMNGYICQGFNPLAAAPSKRKTSEALAKLKWLVIMDPLATETSEFWKNHGEF NDVDSSKIQTEVFRLPTSCFAEERGSLVNSGRVLQWHWQGAEPPGQAKSDLEIMSGIFLRMRDMYRKDGGKYPDPIVNLS WPYANPESPTPEELAMEFNGRALADLPDPKDPTKTLVKKGEQLAGFAQLKDDGTTASGCWIFCGAWTQAGNQMARRDNAD PTGIGQTLNWAWAWPANRRILYNRASCDVNGKPFDPSRKLIGWNGKTWTGADVPDYKLDEPPETGMGPFIMNPEGVARFF ARAGMNEGPFPEHYEPFETPLAANPLHPGNPRALNNPAARVFPDDRASFGKVDQFPHVATTYRLTEHFHYWTKHARLNAI VQPQQFVEIGEDLAKEIGVAHGEQVKVSSNRGHIVAVALVTKRIKPLMVDGRKVQTVGVPLHWGFKGLTKPGYLANTLTP SVGDGNSQTPEFKSFLVKVEKA
Sequences:
>Translated_822_residues MAGLAPTFGRGAMTNHWVDIKNADVILVMGGNAAEAHPCGFKWVTEAKAHRNARLVVVDPRFTRTASVADYYAPIRTGTD IAFLGGVIHYLLTNDKIQHEYVKHYTDFSFIVREDFAFDDGIYSGYDADKHAYPDKSTWDYERGDDGFVKVDETLAHPRC VYNLLKQHYARYTPEMVEKICGTPKDKFLKVCEMLATTAVPGRAGTVLYALGWTHHSVGAQMIRTGAMVQLLLGNIGIAG GGMNALRGHSNIQGLTDLGLMSNLLPGYMTLPMQAEQDFDAYIQKRAQQPLRPNQLSYWKNYRAFHVSFMKAWWGDAASA ENNWGYDYLPKLDKQYDLLQTIELMHAGKMNGYICQGFNPLAAAPSKRKTSEALAKLKWLVIMDPLATETSEFWKNHGEF NDVDSSKIQTEVFRLPTSCFAEERGSLVNSGRVLQWHWQGAEPPGQAKSDLEIMSGIFLRMRDMYRKDGGKYPDPIVNLS WPYANPESPTPEELAMEFNGRALADLPDPKDPTKTLVKKGEQLAGFAQLKDDGTTASGCWIFCGAWTQAGNQMARRDNAD PTGIGQTLNWAWAWPANRRILYNRASCDVNGKPFDPSRKLIGWNGKTWTGADVPDYKLDEPPETGMGPFIMNPEGVARFF ARAGMNEGPFPEHYEPFETPLAANPLHPGNPRALNNPAARVFPDDRASFGKVDQFPHVATTYRLTEHFHYWTKHARLNAI VQPQQFVEIGEDLAKEIGVAHGEQVKVSSNRGHIVAVALVTKRIKPLMVDGRKVQTVGVPLHWGFKGLTKPGYLANTLTP SVGDGNSQTPEFKSFLVKVEKA >Mature_821_residues AGLAPTFGRGAMTNHWVDIKNADVILVMGGNAAEAHPCGFKWVTEAKAHRNARLVVVDPRFTRTASVADYYAPIRTGTDI AFLGGVIHYLLTNDKIQHEYVKHYTDFSFIVREDFAFDDGIYSGYDADKHAYPDKSTWDYERGDDGFVKVDETLAHPRCV YNLLKQHYARYTPEMVEKICGTPKDKFLKVCEMLATTAVPGRAGTVLYALGWTHHSVGAQMIRTGAMVQLLLGNIGIAGG GMNALRGHSNIQGLTDLGLMSNLLPGYMTLPMQAEQDFDAYIQKRAQQPLRPNQLSYWKNYRAFHVSFMKAWWGDAASAE NNWGYDYLPKLDKQYDLLQTIELMHAGKMNGYICQGFNPLAAAPSKRKTSEALAKLKWLVIMDPLATETSEFWKNHGEFN DVDSSKIQTEVFRLPTSCFAEERGSLVNSGRVLQWHWQGAEPPGQAKSDLEIMSGIFLRMRDMYRKDGGKYPDPIVNLSW PYANPESPTPEELAMEFNGRALADLPDPKDPTKTLVKKGEQLAGFAQLKDDGTTASGCWIFCGAWTQAGNQMARRDNADP TGIGQTLNWAWAWPANRRILYNRASCDVNGKPFDPSRKLIGWNGKTWTGADVPDYKLDEPPETGMGPFIMNPEGVARFFA RAGMNEGPFPEHYEPFETPLAANPLHPGNPRALNNPAARVFPDDRASFGKVDQFPHVATTYRLTEHFHYWTKHARLNAIV QPQQFVEIGEDLAKEIGVAHGEQVKVSSNRGHIVAVALVTKRIKPLMVDGRKVQTVGVPLHWGFKGLTKPGYLANTLTPS VGDGNSQTPEFKSFLVKVEKA
Specific function: Allows to use formate as major electron donor during aerobic respiration. Subunit alpha possibly forms the active site [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868720, Length=821, Percent_Identity=65.2862362971985, Blast_Score=1158, Evalue=0.0, Organism=Escherichia coli, GI3868719, Length=822, Percent_Identity=61.9221411192214, Blast_Score=1109, Evalue=0.0, Organism=Escherichia coli, GI3868721, Length=461, Percent_Identity=22.9934924078091, Blast_Score=117, Evalue=3e-27, Organism=Escherichia coli, GI87081797, Length=261, Percent_Identity=26.8199233716475, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1787870, Length=235, Percent_Identity=25.531914893617, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006443 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 - InterPro: IPR006311 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.2.1.2 [H]
Molecular weight: Translated: 91683; Mature: 91552
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLAPTFGRGAMTNHWVDIKNADVILVMGGNAAEAHPCGFKWVTEAKAHRNARLVVVDP CCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC RFTRTASVADYYAPIRTGTDIAFLGGVIHYLLTNDKIQHEYVKHYTDFSFIVREDFAFDD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCC GIYSGYDADKHAYPDKSTWDYERGDDGFVKVDETLAHPRCVYNLLKQHYARYTPEMVEKI CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHCCHHHHHHH CGTPKDKFLKVCEMLATTAVPGRAGTVLYALGWTHHSVGAQMIRTGAMVQLLLGNIGIAG HCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC GGMNALRGHSNIQGLTDLGLMSNLLPGYMTLPMQAEQDFDAYIQKRAQQPLRPNQLSYWK CCHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHH NYRAFHVSFMKAWWGDAASAENNWGYDYLPKLDKQYDLLQTIELMHAGKMNGYICQGFNP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCC LAAAPSKRKTSEALAKLKWLVIMDPLATETSEFWKNHGEFNDVDSSKIQTEVFRLPTSCF HHCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH AEERGSLVNSGRVLQWHWQGAEPPGQAKSDLEIMSGIFLRMRDMYRKDGGKYPDPIVNLS HHHHCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE WPYANPESPTPEELAMEFNGRALADLPDPKDPTKTLVKKGEQLAGFAQLKDDGTTASGCW CCCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCEE IFCGAWTQAGNQMARRDNADPTGIGQTLNWAWAWPANRRILYNRASCDVNGKPFDPSRKL EEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCE IGWNGKTWTGADVPDYKLDEPPETGMGPFIMNPEGVARFFARAGMNEGPFPEHYEPFETP EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCC LAANPLHPGNPRALNNPAARVFPDDRASFGKVDQFPHVATTYRLTEHFHYWTKHARLNAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE VQPQQFVEIGEDLAKEIGVAHGEQVKVSSNRGHIVAVALVTKRIKPLMVDGRKVQTVGVP ECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEHHHHCCCEEECCEEEEEEECC LHWGFKGLTKPGYLANTLTPSVGDGNSQTPEFKSFLVKVEKA CCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHEEECC >Mature Secondary Structure AGLAPTFGRGAMTNHWVDIKNADVILVMGGNAAEAHPCGFKWVTEAKAHRNARLVVVDP CCCCCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCEEEEECC RFTRTASVADYYAPIRTGTDIAFLGGVIHYLLTNDKIQHEYVKHYTDFSFIVREDFAFDD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCC GIYSGYDADKHAYPDKSTWDYERGDDGFVKVDETLAHPRCVYNLLKQHYARYTPEMVEKI CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHCCHHHHHHHHHHHHHHCCHHHHHHH CGTPKDKFLKVCEMLATTAVPGRAGTVLYALGWTHHSVGAQMIRTGAMVQLLLGNIGIAG HCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCC GGMNALRGHSNIQGLTDLGLMSNLLPGYMTLPMQAEQDFDAYIQKRAQQPLRPNQLSYWK CCHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHH NYRAFHVSFMKAWWGDAASAENNWGYDYLPKLDKQYDLLQTIELMHAGKMNGYICQGFNP HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCC LAAAPSKRKTSEALAKLKWLVIMDPLATETSEFWKNHGEFNDVDSSKIQTEVFRLPTSCF HHCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHH AEERGSLVNSGRVLQWHWQGAEPPGQAKSDLEIMSGIFLRMRDMYRKDGGKYPDPIVNLS HHHHCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE WPYANPESPTPEELAMEFNGRALADLPDPKDPTKTLVKKGEQLAGFAQLKDDGTTASGCW CCCCCCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCEE IFCGAWTQAGNQMARRDNADPTGIGQTLNWAWAWPANRRILYNRASCDVNGKPFDPSRKL EEEECHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCE IGWNGKTWTGADVPDYKLDEPPETGMGPFIMNPEGVARFFARAGMNEGPFPEHYEPFETP EECCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCCC LAANPLHPGNPRALNNPAARVFPDDRASFGKVDQFPHVATTYRLTEHFHYWTKHARLNAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEE VQPQQFVEIGEDLAKEIGVAHGEQVKVSSNRGHIVAVALVTKRIKPLMVDGRKVQTVGVP ECHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEHHHHCCCEEECCEEEEEEECC LHWGFKGLTKPGYLANTLTPSVGDGNSQTPEFKSFLVKVEKA CCCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503; 8522521 [H]