Click here to switch to the map view.

The map label for this gene is insK [C]

Identifier: 126443708

GI number: 126443708

Start: 600509

End: 601333

Strand: Reverse

Name: insK [C]

Synonym: BURPS668_A0640

Alternate gene names: 126443708

Gene position: 601333-600509 (Counterclockwise)

Preceding gene: 126445090

Following gene: 126445527

Centisome position: 19.23

GC content: 61.45

Gene sequence:

>825_bases
GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA
TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCG
GCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCACGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAG
GCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACC
CAACGAGGTATGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTTGTCGACG
ATTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCA
GCTCGCTTCCGTGGCTATCCCAAGGCGGTGCGAACAGACCAGGGCCCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC
GTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAATCGTTCAACGGCA
AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAG
GACTACAACGAGCAAAGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGCGGACGCTCC
TGCCGCTTTCCAGGAGTTGGTTTAA

Upstream 100 bases:

>100_bases
CCCGACTGAAGAAACTGCTGGCCGAAGCAATGCTCGATATGGAAGCGTTGAAGGTTGTCGTCAAGGGAAAGCCCTGAGCC
CGCAAGCCAAACGCGAAGCA

Downstream 100 bases:

>100_bases
AGGGACTTTGCTAGAAGCCCATTGGCCCTATCGAAGGGGGCAGGTCACTGATGGCATATTAACGGGCCACCGCGTCCACG
TATCCGGAGCATAAAACTCG

Product: A, transposase OrfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQSALNYLAPSEFAAKHRATADAPAAFQELV

Sequences:

>Translated_274_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQSALNYLAPSEFAAKHRATADAPAAFQELV
>Mature_274_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTHANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYPKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQSALNYLAPSEFAAKHRATADAPAAFQELV

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=262, Percent_Identity=26.7175572519084, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31316; Mature: 31316

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHHHHHH
SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTS
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH
RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYNEQSALNYLAPSEFAAKHRATADAPAAFQELV
CCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVEREGTHANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHHHHHH
SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYPKAVRTDQGPEFTS
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHH
RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYNEQSALNYLAPSEFAAKHRATADAPAAFQELV
CCCHHHHHHHCCCHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]