| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443582
Identifier: 126443582
GI number: 126443582
Start: 2131721
End: 2133385
Strand: Reverse
Name: 126443582
Synonym: BURPS668_A2200
Alternate gene names: NA
Gene position: 2133385-2131721 (Counterclockwise)
Preceding gene: 126442856
Following gene: 126443585
Centisome position: 68.21
GC content: 66.13
Gene sequence:
>1665_bases ATGAGCATCGATTCGACTTCCTCCGGCGGCGCGCAGCCGCTCCATCACGGCGCGAACGGCTCGGTTCACGCGCCGCCGCC GATCATCGTCGCGCCGAAGGACGACGGCGACCAGCCGTTCTTCGATCCGGTCGCCTACGGCAACGGCCCCGACGATTCGG TGACGGACACCACCGAGGCCGCCGCGATCACGCACCACACGGTCCGGATCGACGGCCGCACGATCGCGTACACGGCCGCG GCGGGCCATCTCGTGACTGTCGATCCGAGCAGCTCGCAGCCGGATGCGAAGATCTTCTACGTCGCGTTCACGCAGGACGG CCAGCAGGAGCAAACGCGCCCCGTCACGTTCTTCTACAACGGCGGGCCGGGCTCGTCGGCCGTGTTCGTGCTGCTCGGCT CGTTCGCGCCGCGGCGCATCCGCACGTCGATGCCGAGCTTCACGCCGCCCGCGCCGTACCGGATGGAAGACAACCCGGAC AGCCTGCTCGACAAGAGCGATCTCGTGTTCATCAACCCGGTCGGCACCGGCTATTCGGCGGCGATCGCGCCGCGCAAGAA CCGCGATTTCTGGGGCGTCGATCAGGACGCGAACTCGATCAAGCAGTTCATCAAGCGCTATCTGACGAAGCACAACCGGT GGAATTCGCCGAAGTACCTGTTCGGCGAATCGTACGGCACCGCGCGCAGCTGCGTGCTCGCGTACAAGCTGCACGAGGAC GGCGTCGACCTGAACGGGATCACGCTGCAGTCGTCGATTCTCGATTACCGGCAGGCGGGCAATCCGGTGGGCGCGCTGCC CACCGCGGCGGCCGACGCGTGGTATCACAAGCGGCTCGGCGTCGCGCCGACGCCGACCGATCTCGGCGCGTTCGTGGAGG AGGTCGCGCAGTTCGCGCGCACCGACTATCTCGGCGCGCTGCGCAAGTTCCCGCAGGCCGATGCGGCCGTCGTCAAGAAG CTGTCCGACTACACCGGCATCGACACGACGACGTTGCTGTCGTGGAGCCTCGACATCGCGGGCTACGACGCGCGCGGCAA CGCGCTGTTCCTCACGACGCTGCTGAAGGCACAAGGCCTCGCGCTCGGCGCGTACGACGGCCGCGTGACGGGAATCGAAT CGGGGATCGCGGGCCGGATCGATCCGAACTCGGGCGGCAACGATCCGACGATGACGGCGGTGTCGGGCGTCTACACGGCG ATGTGGAATACGTACCTGAACGAGCAGTTGAAATACACGTCGAACTCGTCGTTCACCGACCTGAACGACCAGGCATTCAA GTACTGGGACTTCGGCCACATCGATCCGACGGGCGAACAGCAGGGCGTCGACGCGAAGGGCAACGTGATCCTGTACACGG CGGGCGATCTCGCCGCGACGATGGCGCTCAACGTCGATCTGAAGGTGCTGTCGGCGAACGGGCTCTACGATTTCGTCACG CCGTTCTACCAGACGGTGCTCGATCTGCAGCAGATGCCGCTCGAGGACCCGAAGGTGCGGCAGAACCTGTCCGCGCGCTT CTATCCGTCCGGGCACATGGTGTACCTCGACGGCGGCTCGCGCACCACGCTCAAGCACGACCTCGCGCAGATGTACGAAT CGACGGTGCGCGACACCGCGGCGGTGATGCGCATTCGCGCGTTGCAGGAGAAAAAGCGCGCGTAG
Upstream 100 bases:
>100_bases GGCAGCGGCAGCGGCGCGCGCGACCGGTGTCGGCGGCAAACGGCTTGGCACGATTGACGATTCGTTCATGCACCCTCAAT CGCACAGAAGGAGCAGCACG
Downstream 100 bases:
>100_bases CGCAGCGCGATTCGCCGCCGGCGGCAAGCGCCCGACGACGCCTCGACCCTCGGCGGCGAGGCGTCGTCGGGCGCGCATGA CCGCCGCCGCGGCGGCCCTT
Product: serine carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; Carboxypeptidase; S10 Family Peptidase; S10 Family Carboxypeptidase; Carboxypeptidase-Like Protein; Peptidase S; Serine Carboxypeptidase Superfamily
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MSIDSTSSGGAQPLHHGANGSVHAPPPIIVAPKDDGDQPFFDPVAYGNGPDDSVTDTTEAAAITHHTVRIDGRTIAYTAA AGHLVTVDPSSSQPDAKIFYVAFTQDGQQEQTRPVTFFYNGGPGSSAVFVLLGSFAPRRIRTSMPSFTPPAPYRMEDNPD SLLDKSDLVFINPVGTGYSAAIAPRKNRDFWGVDQDANSIKQFIKRYLTKHNRWNSPKYLFGESYGTARSCVLAYKLHED GVDLNGITLQSSILDYRQAGNPVGALPTAAADAWYHKRLGVAPTPTDLGAFVEEVAQFARTDYLGALRKFPQADAAVVKK LSDYTGIDTTTLLSWSLDIAGYDARGNALFLTTLLKAQGLALGAYDGRVTGIESGIAGRIDPNSGGNDPTMTAVSGVYTA MWNTYLNEQLKYTSNSSFTDLNDQAFKYWDFGHIDPTGEQQGVDAKGNVILYTAGDLAATMALNVDLKVLSANGLYDFVT PFYQTVLDLQQMPLEDPKVRQNLSARFYPSGHMVYLDGGSRTTLKHDLAQMYESTVRDTAAVMRIRALQEKKRA
Sequences:
>Translated_554_residues MSIDSTSSGGAQPLHHGANGSVHAPPPIIVAPKDDGDQPFFDPVAYGNGPDDSVTDTTEAAAITHHTVRIDGRTIAYTAA AGHLVTVDPSSSQPDAKIFYVAFTQDGQQEQTRPVTFFYNGGPGSSAVFVLLGSFAPRRIRTSMPSFTPPAPYRMEDNPD SLLDKSDLVFINPVGTGYSAAIAPRKNRDFWGVDQDANSIKQFIKRYLTKHNRWNSPKYLFGESYGTARSCVLAYKLHED GVDLNGITLQSSILDYRQAGNPVGALPTAAADAWYHKRLGVAPTPTDLGAFVEEVAQFARTDYLGALRKFPQADAAVVKK LSDYTGIDTTTLLSWSLDIAGYDARGNALFLTTLLKAQGLALGAYDGRVTGIESGIAGRIDPNSGGNDPTMTAVSGVYTA MWNTYLNEQLKYTSNSSFTDLNDQAFKYWDFGHIDPTGEQQGVDAKGNVILYTAGDLAATMALNVDLKVLSANGLYDFVT PFYQTVLDLQQMPLEDPKVRQNLSARFYPSGHMVYLDGGSRTTLKHDLAQMYESTVRDTAAVMRIRALQEKKRA >Mature_553_residues SIDSTSSGGAQPLHHGANGSVHAPPPIIVAPKDDGDQPFFDPVAYGNGPDDSVTDTTEAAAITHHTVRIDGRTIAYTAAA GHLVTVDPSSSQPDAKIFYVAFTQDGQQEQTRPVTFFYNGGPGSSAVFVLLGSFAPRRIRTSMPSFTPPAPYRMEDNPDS LLDKSDLVFINPVGTGYSAAIAPRKNRDFWGVDQDANSIKQFIKRYLTKHNRWNSPKYLFGESYGTARSCVLAYKLHEDG VDLNGITLQSSILDYRQAGNPVGALPTAAADAWYHKRLGVAPTPTDLGAFVEEVAQFARTDYLGALRKFPQADAAVVKKL SDYTGIDTTTLLSWSLDIAGYDARGNALFLTTLLKAQGLALGAYDGRVTGIESGIAGRIDPNSGGNDPTMTAVSGVYTAM WNTYLNEQLKYTSNSSFTDLNDQAFKYWDFGHIDPTGEQQGVDAKGNVILYTAGDLAATMALNVDLKVLSANGLYDFVTP FYQTVLDLQQMPLEDPKVRQNLSARFYPSGHMVYLDGGSRTTLKHDLAQMYESTVRDTAAVMRIRALQEKKRA
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60178; Mature: 60047
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDSTSSGGAQPLHHGANGSVHAPPPIIVAPKDDGDQPFFDPVAYGNGPDDSVTDTTEA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAITHHTVRIDGRTIAYTAAAGHLVTVDPSSSQPDAKIFYVAFTQDGQQEQTRPVTFFYN HEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEC GGPGSSAVFVLLGSFAPRRIRTSMPSFTPPAPYRMEDNPDSLLDKSDLVFINPVGTGYSA CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEE AIAPRKNRDFWGVDQDANSIKQFIKRYLTKHNRWNSPKYLFGESYGTARSCVLAYKLHED EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHEEEEEEEECCC GVDLNGITLQSSILDYRQAGNPVGALPTAAADAWYHKRLGVAPTPTDLGAFVEEVAQFAR CCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TDYLGALRKFPQADAAVVKKLSDYTGIDTTTLLSWSLDIAGYDARGNALFLTTLLKAQGL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEEEEHHHHCCC ALGAYDGRVTGIESGIAGRIDPNSGGNDPTMTAVSGVYTAMWNTYLNEQLKYTSNSSFTD EEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LNDQAFKYWDFGHIDPTGEQQGVDAKGNVILYTAGDLAATMALNVDLKVLSANGLYDFVT CCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCHHHHH PFYQTVLDLQQMPLEDPKVRQNLSARFYPSGHMVYLDGGSRTTLKHDLAQMYESTVRDTA HHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH AVMRIRALQEKKRA HHHHHHHHHHHHCC >Mature Secondary Structure SIDSTSSGGAQPLHHGANGSVHAPPPIIVAPKDDGDQPFFDPVAYGNGPDDSVTDTTEA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHH AAITHHTVRIDGRTIAYTAAAGHLVTVDPSSSQPDAKIFYVAFTQDGQQEQTRPVTFFYN HEEEEEEEEECCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEC GGPGSSAVFVLLGSFAPRRIRTSMPSFTPPAPYRMEDNPDSLLDKSDLVFINPVGTGYSA CCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCCCCEE AIAPRKNRDFWGVDQDANSIKQFIKRYLTKHNRWNSPKYLFGESYGTARSCVLAYKLHED EECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHEEEEEEEECCC GVDLNGITLQSSILDYRQAGNPVGALPTAAADAWYHKRLGVAPTPTDLGAFVEEVAQFAR CCCCCCEEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH TDYLGALRKFPQADAAVVKKLSDYTGIDTTTLLSWSLDIAGYDARGNALFLTTLLKAQGL HHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCEEEEEEHHHHCCC ALGAYDGRVTGIESGIAGRIDPNSGGNDPTMTAVSGVYTAMWNTYLNEQLKYTSNSSFTD EEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCC LNDQAFKYWDFGHIDPTGEQQGVDAKGNVILYTAGDLAATMALNVDLKVLSANGLYDFVT CCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEECCCCHHHHH PFYQTVLDLQQMPLEDPKVRQNLSARFYPSGHMVYLDGGSRTTLKHDLAQMYESTVRDTA HHHHHHHHHHHCCCCCCHHHHCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH AVMRIRALQEKKRA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA