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The map label for this gene is gbpR [H]

Identifier: 126443501

GI number: 126443501

Start: 1088957

End: 1089916

Strand: Reverse

Name: gbpR [H]

Synonym: BURPS668_A1141

Alternate gene names: 126443501

Gene position: 1089916-1088957 (Counterclockwise)

Preceding gene: 126443733

Following gene: 126443165

Centisome position: 34.85

GC content: 70.31

Gene sequence:

>960_bases
TTGCGCAGCAGGAGGCCGAACGCGACGAAGCCGACGATGTTGCTCCAGATCGGAAACGAAATACCGACGAACGATCCCGA
GCCGAATGCGAAGAAGCGCTCCTCGGAGATCATCACCGCGTCGCCGTTCGACGTGACGAACGCGAGCCCGCGCACGACTT
CCATAGTCGCGAGCGTGACGATCAGCGAATTGATCCGCCAGCGCGCGATCAGCACGCCGTTGACGAACCCGACCGCGCCG
CCCGCGAACACGCCCGCCGCGGCGACGAGCAGCACGCCGTGCGTCGCGGTGATCAGCGTCGAGGCGACGACGCCCGAGAA
CGCAGCGATCGACGCGATCACGTCGCCGGGCCTGCGGCGGCTGCCGCCCGCCGTCGCGGCGGTGAAGGGCACGCACGCGA
ACGTGCGGATCTCGGTCGAGATCGACACGAGCAACGTGCTGCTCGAACGCCTCGCGCGGGACAAGCTCGACGTCGTCGTG
GGCCGGCTGCCGGCGGAGCATGACAAGCTGCGGCTGCGCTACGAGCCGCTCACGGGCGAGCCGGTGGCGGCCGTCGTGCG
CGCCGGGCATCCGCTCCTCGAGCGCGCGCCGCTCGCGCGGGCCGACGCGCAGCGCGCCGCATGGGTCGTGCCGCCCGCGG
GCAGCGTGCTGCGCCATCGCGTCGAGCGGATGTTCCAGCGCGCGAGCCTCACGCCGCCCGCGAACGTCGTCGAGACCGCC
GCGCTGCTGTTCGTCACGCGCGTGCTCGAGCGCAGCGACATGATCGCGGTGCTCGCCGAGGACATCGCGCGTTACTACGC
GACGCACGGCATCGTCGCGATGCTGCCGCTCGAGATGGATGGCCGGATGGACGATTTCGGAATCATCACGCGCACGGACG
AGGTGTACGCGCCCGCGGCGGGCGTGACGATCGAGGCGATTCGCGATGCCGCGCGGGAGATTTATACAGTGGCGGCCTGA

Upstream 100 bases:

>100_bases
AACGCGGTGATCTTGATCCACATGACGGGCAGCCCGGCGAGCAGCGCCGCCTCGCCGTTGCCGCCGACGGCGAGCACGTG
CTTGCCGAACGAACACCGTC

Downstream 100 bases:

>100_bases
CGGCGCCGGCGCGGGACGGCTCGCGCTCCGGGCTCGTTGAGTCCCGCTGAGTCCCGTTAAGCCCCGTTGAACTCGTTGCC
CCCTTGGGCCCGTCGAGCCT

Product: transcriptional regulator

Products: NA

Alternate protein names: Galactose-binding protein regulator; GBP regulator [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MRSRRPNATKPTMLLQIGNEIPTNDPEPNAKKRSSEIITASPFDVTNASPRTTSIVASVTISELIRQRAISTPLTNPTAP
PANTPAAATSSTPCVAVISVEATTPENAAIDAITSPGLRRLPPAVAAVKGTHANVRISVEIDTSNVLLERLARDKLDVVV
GRLPAEHDKLRLRYEPLTGEPVAAVVRAGHPLLERAPLARADAQRAAWVVPPAGSVLRHRVERMFQRASLTPPANVVETA
ALLFVTRVLERSDMIAVLAEDIARYYATHGIVAMLPLEMDGRMDDFGIITRTDEVYAPAAGVTIEAIRDAAREIYTVAA

Sequences:

>Translated_319_residues
MRSRRPNATKPTMLLQIGNEIPTNDPEPNAKKRSSEIITASPFDVTNASPRTTSIVASVTISELIRQRAISTPLTNPTAP
PANTPAAATSSTPCVAVISVEATTPENAAIDAITSPGLRRLPPAVAAVKGTHANVRISVEIDTSNVLLERLARDKLDVVV
GRLPAEHDKLRLRYEPLTGEPVAAVVRAGHPLLERAPLARADAQRAAWVVPPAGSVLRHRVERMFQRASLTPPANVVETA
ALLFVTRVLERSDMIAVLAEDIARYYATHGIVAMLPLEMDGRMDDFGIITRTDEVYAPAAGVTIEAIRDAAREIYTVAA
>Mature_319_residues
MRSRRPNATKPTMLLQIGNEIPTNDPEPNAKKRSSEIITASPFDVTNASPRTTSIVASVTISELIRQRAISTPLTNPTAP
PANTPAAATSSTPCVAVISVEATTPENAAIDAITSPGLRRLPPAVAAVKGTHANVRISVEIDTSNVLLERLARDKLDVVV
GRLPAEHDKLRLRYEPLTGEPVAAVVRAGHPLLERAPLARADAQRAAWVVPPAGSVLRHRVERMFQRASLTPPANVVETA
ALLFVTRVLERSDMIAVLAEDIARYYATHGIVAMLPLEMDGRMDDFGIITRTDEVYAPAAGVTIEAIRDAAREIYTVAA

Specific function: Does not seem to be required for sbpA expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34255; Mature: 34255

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRRPNATKPTMLLQIGNEIPTNDPEPNAKKRSSEIITASPFDVTNASPRTTSIVASVT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHH
ISELIRQRAISTPLTNPTAPPANTPAAATSSTPCVAVISVEATTPENAAIDAITSPGLRR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCHHH
LPPAVAAVKGTHANVRISVEIDTSNVLLERLARDKLDVVVGRLPAEHDKLRLRYEPLTGE
CCCHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
PVAAVVRAGHPLLERAPLARADAQRAAWVVPPAGSVLRHRVERMFQRASLTPPANVVETA
HHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
ALLFVTRVLERSDMIAVLAEDIARYYATHGIVAMLPLEMDGRMDDFGIITRTDEVYAPAA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCC
GVTIEAIRDAAREIYTVAA
CCHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MRSRRPNATKPTMLLQIGNEIPTNDPEPNAKKRSSEIITASPFDVTNASPRTTSIVASVT
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHH
ISELIRQRAISTPLTNPTAPPANTPAAATSSTPCVAVISVEATTPENAAIDAITSPGLRR
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCHHH
LPPAVAAVKGTHANVRISVEIDTSNVLLERLARDKLDVVVGRLPAEHDKLRLRYEPLTGE
CCCHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
PVAAVVRAGHPLLERAPLARADAQRAAWVVPPAGSVLRHRVERMFQRASLTPPANVVETA
HHHHHHHCCCHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
ALLFVTRVLERSDMIAVLAEDIARYYATHGIVAMLPLEMDGRMDDFGIITRTDEVYAPAA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCCCCCC
GVTIEAIRDAAREIYTVAA
CCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10361275 [H]