| Definition | Burkholderia pseudomallei 668 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_009075 |
| Length | 3,127,456 |
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The map label for this gene is 126443322
Identifier: 126443322
GI number: 126443322
Start: 1642895
End: 1643110
Strand: Reverse
Name: 126443322
Synonym: BURPS668_A1691
Alternate gene names: NA
Gene position: 1643110-1642895 (Counterclockwise)
Preceding gene: 126442451
Following gene: 126444600
Centisome position: 52.54
GC content: 62.04
Gene sequence:
>216_bases ATGCCGGTTACCAACGCGATCGAGTCGCTGCACATGCAGCTTCGGAAGATCATCAAGGCACGCGGCCACTTCCCGTCGGA CGAGGCCGCACTCAAACTGATCCGGCCGGCGCTGCGCAACGTCGTGGCCAAGTGGACCGGCTCCCGGCACGATTGGAAGA GTGCGATGACCCGGTTCGCGCTGCTTTACCCGGAACGATTCAACATGGGAGTCTGA
Upstream 100 bases:
>100_bases CCTCGCACGCTGTTGAGGCGCCGGAGGTGCCCCATGTCCCGGATGGTCACACCATACGCTCAAACCGCTCGGCTCGGGAA CGCGAGGCACCGGCTATATC
Downstream 100 bases:
>100_bases ATCTCAACCCGCCTCACACACGGAATTCCGGATACCTCTCGCGCGCCTATTAATCAGTGTTTCCCTAGAACTCCAGCTTG AATGCGCGCAGGTTTGCGTC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MPVTNAIESLHMQLRKIIKARGHFPSDEAALKLIRPALRNVVAKWTGSRHDWKSAMTRFALLYPERFNMGV
Sequences:
>Translated_71_residues MPVTNAIESLHMQLRKIIKARGHFPSDEAALKLIRPALRNVVAKWTGSRHDWKSAMTRFALLYPERFNMGV >Mature_70_residues PVTNAIESLHMQLRKIIKARGHFPSDEAALKLIRPALRNVVAKWTGSRHDWKSAMTRFALLYPERFNMGV
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 8175; Mature: 8044
Theoretical pI: Translated: 11.58; Mature: 11.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTNAIESLHMQLRKIIKARGHFPSDEAALKLIRPALRNVVAKWTGSRHDWKSAMTRFA CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LLYPERFNMGV HHCCHHHCCCC >Mature Secondary Structure PVTNAIESLHMQLRKIIKARGHFPSDEAALKLIRPALRNVVAKWTGSRHDWKSAMTRFA CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LLYPERFNMGV HHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1849509; 1327271; 11481430; 11481432 [H]