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The map label for this gene is yggA [C]

Identifier: 126443319

GI number: 126443319

Start: 42374

End: 42994

Strand: Reverse

Name: yggA [C]

Synonym: BURPS668_A0049

Alternate gene names: 126443319

Gene position: 42994-42374 (Counterclockwise)

Preceding gene: 126443969

Following gene: 126443117

Centisome position: 1.37

GC content: 68.28

Gene sequence:

>621_bases
ATGAACTGGATCGCTTTTTCTCACGGCGCGATGCTCTGCGCATCGCTCATCGTCACCATCGGCGCGCAGAATGCGTTCAT
CCTCCGGCAGGGCATCATGCGTTCGCACGTCGGCAAGATCGTCCTGCTCTGCACGCTGTCGGACATGCTGCTGATCGGCG
CGGGCGTCGGCGGCGCATCGGTGCTCGTCGAGCGCTATCCGGCCTTCGTTCATGCCGTGCTGTATGTCGGCCTCGCCTAT
CTCGCATGGTTCGGCCTGAGCGCGCTGCGCCGCGCGTTCAAGCCCGGCCACGAAACGCTCGATGCGACGGGCGCGGTTGC
CGCGCCGCCCGCGCAGCGCGCCTGGCCGATCGTGCTGATGACGCTCGCGTTCACATGGCTCAACCCGCACGTCTATCTGG
ACACGTTCCTGCTGATCGGCACGGCCGGCGCGCGCGAGCCGGAAGGCGCGCGCGGCGCGTTCGCGATCGGCGCGATGGCG
GTCAGCGCGGTATGGTTCGTCGCGCTCGGATACGGCGCGCGATTGCTCGCGCCATGGTTCAAGCGCGCGCTCGCGTGGCG
CGTGCTCGACGGCGCGATCGGCGGCATGGTGCTGTTTCTCGCGGCGGTGCAGTTGCGCTAA

Upstream 100 bases:

>100_bases
CCTTAATCGGCATTAAATTATTTAGCTTTTCTTACTCAAGCGATCATCGCAGACTAGCGCCTCTTGCCCCGTTAGTCCAC
CGCCGGAAGCCGCAACGAAC

Downstream 100 bases:

>100_bases
CGCGGCGGATGCGCATTGGCGGTGCTGACGCCATCTGAAGCGCGGACGGCGGCACGCGGCGCACGACGGCGAGCGAGCCA
CGAACGTCATGGCCGCACGC

Product: LysE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MNWIAFSHGAMLCASLIVTIGAQNAFILRQGIMRSHVGKIVLLCTLSDMLLIGAGVGGASVLVERYPAFVHAVLYVGLAY
LAWFGLSALRRAFKPGHETLDATGAVAAPPAQRAWPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARGAFAIGAMA
VSAVWFVALGYGARLLAPWFKRALAWRVLDGAIGGMVLFLAAVQLR

Sequences:

>Translated_206_residues
MNWIAFSHGAMLCASLIVTIGAQNAFILRQGIMRSHVGKIVLLCTLSDMLLIGAGVGGASVLVERYPAFVHAVLYVGLAY
LAWFGLSALRRAFKPGHETLDATGAVAAPPAQRAWPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARGAFAIGAMA
VSAVWFVALGYGARLLAPWFKRALAWRVLDGAIGGMVLFLAAVQLR
>Mature_206_residues
MNWIAFSHGAMLCASLIVTIGAQNAFILRQGIMRSHVGKIVLLCTLSDMLLIGAGVGGASVLVERYPAFVHAVLYVGLAY
LAWFGLSALRRAFKPGHETLDATGAVAAPPAQRAWPIVLMTLAFTWLNPHVYLDTFLLIGTAGAREPEGARGAFAIGAMA
VSAVWFVALGYGARLLAPWFKRALAWRVLDGAIGGMVLFLAAVQLR

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=196, Percent_Identity=37.7551020408163, Blast_Score=120, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21977; Mature: 21977

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWIAFSHGAMLCASLIVTIGAQNAFILRQGIMRSHVGKIVLLCTLSDMLLIGAGVGGAS
CCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCHHH
VLVERYPAFVHAVLYVGLAYLAWFGLSALRRAFKPGHETLDATGAVAAPPAQRAWPIVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHH
TLAFTWLNPHVYLDTFLLIGTAGAREPEGARGAFAIGAMAVSAVWFVALGYGARLLAPWF
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KRALAWRVLDGAIGGMVLFLAAVQLR
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWIAFSHGAMLCASLIVTIGAQNAFILRQGIMRSHVGKIVLLCTLSDMLLIGAGVGGAS
CCEEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHCCCCHHH
VLVERYPAFVHAVLYVGLAYLAWFGLSALRRAFKPGHETLDATGAVAAPPAQRAWPIVLM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHH
TLAFTWLNPHVYLDTFLLIGTAGAREPEGARGAFAIGAMAVSAVWFVALGYGARLLAPWF
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KRALAWRVLDGAIGGMVLFLAAVQLR
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]